UniProtKB - Q5SKW0 (Q5SKW0_THET8)
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Protein
Submitted name:
Probable ribosomal RNA small subunit methyltransferase
Gene
TTHA0533
Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Functioni
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Binding sitei | 8 | S-adenosyl-L-homocysteineCombined sources | 1 | |
Binding sitei | 8 | S-adenosyl-L-methionineCombined sources | 1 | |
Binding sitei | 207 | S-adenosyl-L-homocysteineCombined sources | 1 | |
Binding sitei | 207 | S-adenosyl-L-methionineCombined sources | 1 | |
Binding sitei | 216 | S-adenosyl-L-homocysteineCombined sources | 1 | |
Binding sitei | 216 | S-adenosyl-L-methionineCombined sources | 1 | |
Binding sitei | 241 | S-adenosyl-L-homocysteine; via carbonyl oxygenCombined sources | 1 | |
Binding sitei | 241 | S-adenosyl-L-methionine; via carbonyl oxygenCombined sources | 1 | |
Binding sitei | 307 | S-adenosyl-L-homocysteineCombined sources | 1 | |
Binding sitei | 307 | S-adenosyl-L-methionineCombined sources | 1 |
GO - Molecular functioni
- nucleic acid binding Source: InterPro
- rRNA (adenine-N6,N6-)-dimethyltransferase activity Source: InterPro
Keywordsi
Molecular function | MethyltransferaseSAAS annotationImported, Transferase |
Biological process | rRNA processingSAAS annotation |
Ligand | S-adenosyl-L-methionineCombined sources |
Enzyme and pathway databases
BioCyci | TTHE300852:G1GKC-550-MONOMER |
Names & Taxonomyi
Protein namesi | Submitted name: Probable ribosomal RNA small subunit methyltransferaseImported |
Gene namesi | Ordered Locus Names:TTHA0533Imported |
Organismi | Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Imported |
Taxonomic identifieri | 300852 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus › |
Proteomesi |
|
Structurei
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
2ZUL | X-ray | 1.80 | A | 1-375 | [»] | |
2ZWV | X-ray | 2.00 | A | 1-375 | [»] | |
3DMF | X-ray | 1.58 | A | 1-375 | [»] | |
3DMG | X-ray | 1.55 | A | 1-375 | [»] | |
3DMH | X-ray | 1.55 | A | 1-375 | [»] | |
ProteinModelPortali | Q5SKW0 | |||||
SMRi | Q5SKW0 | |||||
ModBasei | Search... | |||||
MobiDBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q5SKW0 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 197 – 368 | MTSInterPro annotationAdd BLAST | 172 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 262 – 263 | S-adenosyl-L-homocysteine bindingCombined sources | 2 | |
Regioni | 262 – 263 | S-adenosyl-L-methionine bindingCombined sources | 2 | |
Regioni | 288 – 289 | S-adenosyl-L-homocysteine bindingCombined sources | 2 | |
Regioni | 288 – 289 | S-adenosyl-L-methionine bindingCombined sources | 2 |
Phylogenomic databases
eggNOGi | ENOG4107S8D Bacteria COG2813 LUCA |
HOGENOMi | HOG000099293 |
KOi | K00564 |
OMAi | TNPPFHV |
PhylomeDBi | Q5SKW0 |
Family and domain databases
InterProi | View protein in InterPro IPR002052 DNA_methylase_N6_adenine_CS IPR020596 rRNA_Ade_Mease_Trfase_CS IPR029063 SAM-dependent_MTases IPR007848 Small_mtfrase_dom |
Pfami | View protein in Pfam PF05175 MTS, 1 hit |
SUPFAMi | SSF53335 SSF53335, 2 hits |
PROSITEi | View protein in PROSITE PS00092 N6_MTASE, 1 hit PS01131 RRNA_A_DIMETH, 1 hit |
i Sequence
Sequence statusi: Complete.
Q5SKW0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSLTREAYHR LTPLPHPGGR LFIKPGARGY RDPVHDLLQK TVEPFGERAL
60 70 80 90 100
DLNPGVGWGS LPLEGRMAVE RLETSRAAFR CLTASGLQAR LALPWEAAAG
110 120 130 140 150
AYDLVVLALP AGRGTAYVQA SLVAAARALR MGGRLYLAGD KNKGFERYFK
160 170 180 190 200
EARALLGYGV VVRREGPYRV ALLEKEKEAP PLPSLWRAFS ARILGAEYTF
210 220 230 240 250
HHLPGVFSAG KVDPASLLLL EALQERLGPE GVRGRQVLDL GAGYGALTLP
260 270 280 290 300
LARMGAEVVG VEDDLASVLS LQKGLEANAL KAQALHSDVD EALTEEARFD
310 320 330 340 350
IIVTNPPFHV GGAVILDVAQ AFVNVAAARL RPGGVFFLVS NPFLKYEPLL
360 370
EEKFGAFQTL KVAEYKVLFA EKRGR
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP008226 Genomic DNA Translation: BAD70356.1 |
RefSeqi | WP_011228006.1, NC_006461.1 YP_143799.1, NC_006461.1 |
Genome annotation databases
EnsemblBacteriai | BAD70356; BAD70356; BAD70356 |
GeneIDi | 3169440 |
KEGGi | ttj:TTHA0533 |
PATRICi | fig|300852.9.peg.532 |
Similar proteinsi
Entry informationi
Entry namei | Q5SKW0_THET8 | |
Accessioni | Q5SKW0Primary (citable) accession number: Q5SKW0 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | December 21, 2004 |
Last sequence update: | December 21, 2004 | |
Last modified: | February 28, 2018 | |
This is version 94 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |