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Protein
Submitted name:

Probable ribosomal RNA small subunit methyltransferase

Gene

TTHA0533

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei8S-adenosyl-L-homocysteineCombined sources1
Binding sitei8S-adenosyl-L-methionineCombined sources1
Binding sitei207S-adenosyl-L-homocysteineCombined sources1
Binding sitei207S-adenosyl-L-methionineCombined sources1
Binding sitei216S-adenosyl-L-homocysteineCombined sources1
Binding sitei216S-adenosyl-L-methionineCombined sources1
Binding sitei241S-adenosyl-L-homocysteine; via carbonyl oxygenCombined sources1
Binding sitei241S-adenosyl-L-methionine; via carbonyl oxygenCombined sources1
Binding sitei307S-adenosyl-L-homocysteineCombined sources1
Binding sitei307S-adenosyl-L-methionineCombined sources1

GO - Molecular functioni

Keywordsi

Molecular functionMethyltransferaseSAAS annotationImported, Transferase
Biological processrRNA processingSAAS annotation
LigandS-adenosyl-L-methionineCombined sources

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-550-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Probable ribosomal RNA small subunit methyltransferaseImported
Gene namesi
Ordered Locus Names:TTHA0533Imported
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Imported
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi300852.TTHA0533

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2ZULX-ray1.80A1-375[»]
2ZWVX-ray2.00A1-375[»]
3DMFX-ray1.58A1-375[»]
3DMGX-ray1.55A1-375[»]
3DMHX-ray1.55A1-375[»]
ProteinModelPortaliQ5SKW0
SMRiQ5SKW0
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SKW0

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini197 – 368MTSInterPro annotationAdd BLAST172

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni262 – 263S-adenosyl-L-homocysteine bindingCombined sources2
Regioni262 – 263S-adenosyl-L-methionine bindingCombined sources2
Regioni288 – 289S-adenosyl-L-homocysteine bindingCombined sources2
Regioni288 – 289S-adenosyl-L-methionine bindingCombined sources2

Phylogenomic databases

eggNOGiENOG4107S8D Bacteria
COG2813 LUCA
HOGENOMiHOG000099293
KOiK00564
OMAiTNPPFHV
PhylomeDBiQ5SKW0

Family and domain databases

InterProiView protein in InterPro
IPR002052 DNA_methylase_N6_adenine_CS
IPR020596 rRNA_Ade_Mease_Trfase_CS
IPR029063 SAM-dependent_MTases
IPR007848 Small_mtfrase_dom
PfamiView protein in Pfam
PF05175 MTS, 1 hit
SUPFAMiSSF53335 SSF53335, 2 hits
PROSITEiView protein in PROSITE
PS00092 N6_MTASE, 1 hit
PS01131 RRNA_A_DIMETH, 1 hit

Sequencei

Sequence statusi: Complete.

Q5SKW0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLTREAYHR LTPLPHPGGR LFIKPGARGY RDPVHDLLQK TVEPFGERAL
60 70 80 90 100
DLNPGVGWGS LPLEGRMAVE RLETSRAAFR CLTASGLQAR LALPWEAAAG
110 120 130 140 150
AYDLVVLALP AGRGTAYVQA SLVAAARALR MGGRLYLAGD KNKGFERYFK
160 170 180 190 200
EARALLGYGV VVRREGPYRV ALLEKEKEAP PLPSLWRAFS ARILGAEYTF
210 220 230 240 250
HHLPGVFSAG KVDPASLLLL EALQERLGPE GVRGRQVLDL GAGYGALTLP
260 270 280 290 300
LARMGAEVVG VEDDLASVLS LQKGLEANAL KAQALHSDVD EALTEEARFD
310 320 330 340 350
IIVTNPPFHV GGAVILDVAQ AFVNVAAARL RPGGVFFLVS NPFLKYEPLL
360 370
EEKFGAFQTL KVAEYKVLFA EKRGR
Length:375
Mass (Da):40,656
Last modified:December 21, 2004 - v1
Checksum:i7EF362A795A93C55
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD70356.1
RefSeqiWP_011228006.1, NC_006461.1
YP_143799.1, NC_006461.1

Genome annotation databases

EnsemblBacteriaiBAD70356; BAD70356; BAD70356
GeneIDi3169440
KEGGittj:TTHA0533
PATRICifig|300852.9.peg.532

Similar proteinsi

Entry informationi

Entry nameiQ5SKW0_THET8
AccessioniPrimary (citable) accession number: Q5SKW0
Entry historyiIntegrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: February 28, 2018
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported