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Protein
Submitted name:

Ribosome-binding factor A

Gene

TTHA0907

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-940-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosome-binding factor AImported
Gene namesi
Ordered Locus Names:TTHA0907Imported
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Imported
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi300852.TTHA0907.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2DYJX-ray1.84A/B1-95[»]
2R1Celectron microscopy12.50A1-95[»]
ProteinModelPortaliQ5SJV1.
SMRiQ5SJV1. Positions 4-94.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SJV1.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000218325.
KOiK02834.
OMAiGHLQREV.
OrthoDBiEOG6F29C9.

Family and domain databases

Gene3Di3.30.300.20. 1 hit.
InterProiIPR015946. KH_dom-like_a/b.
IPR000238. Ribosome-bd_facA.
IPR023799. Ribosome-bd_facA_dom.
[Graphical view]
PfamiPF02033. RBFA. 1 hit.
[Graphical view]
ProDomiPD007327. Rib_bd_factA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF89919. SSF89919. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5SJV1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYGKAHLEA QLKRALAEEI QALEDPRLFL LTVEAVRLSK DGSVLSVYVE
60 70 80 90
AFREEEGALR ALSRAERRLV AALARRVRMR RLPRLEFLPW RASPA
Length:95
Mass (Da):10,857
Last modified:December 21, 2004 - v1
Checksum:i2807A8979E74A3C9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD70730.1.
RefSeqiWP_011172996.1. NC_006461.1.
YP_144173.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD70730; BAD70730; BAD70730.
GeneIDi3169952.
KEGGittj:TTHA0907.
PATRICi23956794. VBITheThe93045_0899.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD70730.1.
RefSeqiWP_011172996.1. NC_006461.1.
YP_144173.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2DYJX-ray1.84A/B1-95[»]
2R1Celectron microscopy12.50A1-95[»]
ProteinModelPortaliQ5SJV1.
SMRiQ5SJV1. Positions 4-94.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA0907.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD70730; BAD70730; BAD70730.
GeneIDi3169952.
KEGGittj:TTHA0907.
PATRICi23956794. VBITheThe93045_0899.

Phylogenomic databases

HOGENOMiHOG000218325.
KOiK02834.
OMAiGHLQREV.
OrthoDBiEOG6F29C9.

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-940-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ5SJV1.

Family and domain databases

Gene3Di3.30.300.20. 1 hit.
InterProiIPR015946. KH_dom-like_a/b.
IPR000238. Ribosome-bd_facA.
IPR023799. Ribosome-bd_facA_dom.
[Graphical view]
PfamiPF02033. RBFA. 1 hit.
[Graphical view]
ProDomiPD007327. Rib_bd_factA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF89919. SSF89919. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Thermus thermophilus HB8."
    Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB8 / ATCC 27634 / DSM 579Imported.
  2. Cited for: X-RAY CRYSTALLOGRAPHY (1.84 ANGSTROMS).

Entry informationi

Entry nameiQ5SJV1_THET8
AccessioniPrimary (citable) accession number: Q5SJV1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: March 16, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.