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Protein

30S ribosomal protein S16

Gene

rpsP

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Binds to the lower part of the body of the 30S subunit, where it stabilizes two of its domains.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S16UniRule annotation
Gene namesi
Name:rpsPUniRule annotation
Ordered Locus Names:TTHA1035
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Pathology & Biotechi

Chemistry databases

DrugBankiDB08185. 2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001672691 – 8830S ribosomal protein S16Add BLAST88

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.

Protein-protein interaction databases

STRINGi300852.TTHA1035.

Structurei

Secondary structure

188
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 8Combined sources7
Beta strandi17 – 23Combined sources7
Beta strandi28 – 30Combined sources3
Beta strandi33 – 39Combined sources7
Beta strandi49 – 51Combined sources3
Helixi53 – 60Combined sources8
Turni61 – 63Combined sources3
Beta strandi64 – 66Combined sources3
Helixi68 – 76Combined sources9
Turni77 – 80Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00P1-88[»]
1HNWX-ray3.40P1-88[»]
1HNXX-ray3.40P1-88[»]
1HNZX-ray3.30P1-88[»]
1HR0X-ray3.20P1-88[»]
1I94X-ray3.20P1-88[»]
1I95X-ray4.50P1-88[»]
1I96X-ray4.20P1-88[»]
1I97X-ray4.50P1-88[»]
1IBKX-ray3.31P1-88[»]
1IBLX-ray3.11P1-88[»]
1IBMX-ray3.31P1-88[»]
1J5EX-ray3.05P1-88[»]
1JGOX-ray5.60S1-88[»]
1JGPX-ray7.00S1-88[»]
1JGQX-ray5.00S1-88[»]
1L1Umodel-P1-83[»]
1ML5electron microscopy14.00S1-88[»]
1N32X-ray3.00P1-88[»]
1N33X-ray3.35P1-88[»]
1N34X-ray3.80P1-88[»]
1N36X-ray3.65P1-88[»]
1VVJX-ray3.44QP/XP1-88[»]
1VY4X-ray2.60AP/CP1-88[»]
1VY5X-ray2.55AP/CP1-88[»]
1VY6X-ray2.90AP/CP1-88[»]
1VY7X-ray2.80AP/CP1-88[»]
1XMOX-ray3.25P1-88[»]
1XMQX-ray3.00P1-88[»]
1XNQX-ray3.05P1-88[»]
1XNRX-ray3.10P1-88[»]
2E5LX-ray3.30P1-88[»]
2F4VX-ray3.80P1-88[»]
2HHHX-ray3.35P1-88[»]
2UU9X-ray3.10P1-88[»]
2UUAX-ray2.90P1-88[»]
2UUBX-ray2.90P1-88[»]
2UUCX-ray3.10P1-88[»]
2UXBX-ray3.10P1-88[»]
2UXCX-ray2.90P1-88[»]
2UXDX-ray3.20P1-88[»]
2VQEX-ray2.50P1-88[»]
2VQFX-ray2.90P1-88[»]
2ZM6X-ray3.30P1-88[»]
3OTOX-ray3.69P1-88[»]
3T1HX-ray3.11P1-88[»]
3T1YX-ray2.80P1-88[»]
4AQYX-ray3.50P1-88[»]
4B3MX-ray2.90P1-88[»]
4B3RX-ray3.00P1-88[»]
4B3SX-ray3.15P1-88[»]
4B3TX-ray3.00P1-88[»]
4DR1X-ray3.60P1-88[»]
4DR2X-ray3.25P1-88[»]
4DR3X-ray3.35P1-88[»]
4DR4X-ray3.97P1-88[»]
4DR5X-ray3.45P1-88[»]
4DR6X-ray3.30P1-88[»]
4DR7X-ray3.75P1-88[»]
4DUYX-ray3.39P1-88[»]
4DUZX-ray3.65P1-88[»]
4DV0X-ray3.85P1-88[»]
4DV1X-ray3.85P1-88[»]
4DV2X-ray3.65P1-88[»]
4DV3X-ray3.55P1-88[»]
4DV4X-ray3.65P1-88[»]
4DV5X-ray3.68P1-88[»]
4DV6X-ray3.30P1-88[»]
4DV7X-ray3.29P1-88[»]
4GKJX-ray3.30P1-83[»]
4GKKX-ray3.20P1-83[»]
4JI0X-ray3.49P1-88[»]
4JI1X-ray3.14P1-88[»]
4JI2X-ray3.64P1-88[»]
4JI3X-ray3.35P1-88[»]
4JI4X-ray3.69P1-88[»]
4JI5X-ray3.85P1-88[»]
4JI6X-ray3.55P1-88[»]
4JI7X-ray3.50P1-88[»]
4JI8X-ray3.74P1-88[»]
4JV5X-ray3.16P1-83[»]
4JYAX-ray3.10P1-83[»]
4K0KX-ray3.40P1-84[»]
4KHPX-ray3.10P1-83[»]
4L47X-ray3.22QP/XP1-88[»]
4L71X-ray3.90QP/XP1-88[»]
4LELX-ray3.90QP/XP1-88[»]
4LF4X-ray3.34P1-88[»]
4LF5X-ray3.75P1-88[»]
4LF6X-ray3.31P1-88[»]
4LF7X-ray3.15P1-88[»]
4LF8X-ray3.15P1-88[»]
4LF9X-ray3.28P1-88[»]
4LFAX-ray3.65P1-88[»]
4LFBX-ray3.01P1-88[»]
4LFCX-ray3.60P1-88[»]
4LFZX-ray3.92QP/XP1-88[»]
4LNTX-ray2.94QP/XP1-88[»]
4LSKX-ray3.48QP/XP1-88[»]
4LT8X-ray3.14QP/XP1-88[»]
4NXMX-ray3.65P1-88[»]
4NXNX-ray3.54P1-88[»]
4OX9X-ray3.80P1-88[»]
4P6FX-ray3.60QP/XP1-88[»]
4P70X-ray3.68QP/XP1-88[»]
4TUAX-ray3.60QP/XP1-88[»]
4TUBX-ray3.60QP/XP1-88[»]
4TUCX-ray3.60QP/XP1-88[»]
4TUDX-ray3.60QP/XP1-88[»]
4TUEX-ray3.50QP/XP1-88[»]
4V42X-ray5.50S1-88[»]
4V49X-ray8.70P1-83[»]
4V4AX-ray9.50P1-83[»]
4V4IX-ray3.71q1-88[»]
4V4PX-ray5.50BS1-88[»]
4V4RX-ray5.90AP1-88[»]
4V4SX-ray6.76AP1-88[»]
4V4TX-ray6.46AP1-88[»]
4V4XX-ray5.00AS1-88[»]
4V4YX-ray5.50AS1-88[»]
4V4ZX-ray4.51AS1-88[»]
4V51X-ray2.80AP/CP1-88[»]
4V5AX-ray3.50AP/CP1-88[»]
4V5CX-ray3.30AP/CP1-88[»]
4V5DX-ray3.50AP/CP1-88[»]
4V5EX-ray3.45AP/CP1-88[»]
4V5FX-ray3.60AP/CP1-88[»]
4V5GX-ray3.60AP/CP1-88[»]
4V5JX-ray3.10AP/CP1-88[»]
4V5KX-ray3.20AP/CP1-88[»]
4V5LX-ray3.10AP1-88[»]
4V5Melectron microscopy7.80AP1-88[»]
4V5Nelectron microscopy7.60AP1-88[»]
4V5PX-ray3.10AP/CP1-88[»]
4V5QX-ray3.10AP/CP1-88[»]
4V5RX-ray3.10AP/CP1-88[»]
4V5SX-ray3.10AP/CP1-88[»]
4V68electron microscopy6.40AP1-84[»]
4V6AX-ray3.10AP/CP1-88[»]
4V6FX-ray3.10BS/CS1-88[»]
4V6GX-ray3.50AS/CS1-88[»]
4V7JX-ray3.30Ap/Bp1-88[»]
4V7KX-ray3.60Ap/Bp1-88[»]
4V7LX-ray3.00AP/CP1-88[»]
4V7MX-ray3.45AP/CP1-88[»]
4V7WX-ray3.00AP/CP1-88[»]
4V7XX-ray3.00AP/CP1-88[»]
4V7YX-ray3.00AP/CP1-88[»]
4V7ZX-ray3.10AP/CP1-88[»]
4V87X-ray3.10BS/CS1-88[»]
4V8AX-ray3.20CP/DP1-88[»]
4V8BX-ray3.00AS/CS1-88[»]
4V8CX-ray3.30CS/DS1-88[»]
4V8DX-ray3.00AS/CS1-88[»]
4V8EX-ray3.30BS/DS1-88[»]
4V8FX-ray3.30BS/CS1-88[»]
4V8GX-ray3.00AP/CP1-88[»]
4V8HX-ray3.10AP/CP1-88[»]
4V8IX-ray2.70AP/CP1-88[»]
4V8JX-ray3.90AP/CP1-88[»]
4V8NX-ray3.10AP/CP1-88[»]
4V8OX-ray3.80AP1-88[»]
4V8QX-ray3.10BP1-88[»]
4V8UX-ray3.70AP/CP1-88[»]
4V8XX-ray3.35AP/CP1-88[»]
4V90X-ray2.95AP1-88[»]
4V95X-ray3.20AP/CP1-88[»]
4V97X-ray3.52AP/CP1-88[»]
4V9AX-ray3.30AS/CS1-88[»]
4V9BX-ray3.10AS/CS1-88[»]
4V9HX-ray2.86AP1-83[»]
4V9IX-ray3.30AP/CP1-83[»]
4V9RX-ray3.00AP/CP1-88[»]
4V9SX-ray3.10AP/CP1-88[»]
4W2EX-ray2.90p1-88[»]
4W2FX-ray2.40AP/CP1-88[»]
4W2GX-ray2.55AP/CP1-88[»]
4W2HX-ray2.70AP/CP1-88[»]
4W2IX-ray2.70AP/CP1-88[»]
4W4GX-ray3.30QP/XP1-88[»]
4WPOX-ray2.80BP/DP1-88[»]
4WQ1X-ray3.107A/7I1-88[»]
4WQFX-ray2.80BP/DP1-88[»]
4WQRX-ray3.157A/7I1-88[»]
4WQUX-ray2.80BP/DP1-88[»]
4WQYX-ray2.80BP/DP1-88[»]
4WR6X-ray3.057A/7I1-88[»]
4WRAX-ray3.057A/7I1-88[»]
4WROX-ray3.057I1-88[»]
4WSDX-ray2.957A/7I1-88[»]
4WSMX-ray3.307A/7I1-88[»]
4WT1X-ray3.057A/7I1-88[»]
4WT8X-ray3.40AP/BP1-83[»]
4WU1X-ray3.207A/7I1-88[»]
4WZDX-ray3.107A/7I1-88[»]
4WZOX-ray3.307A/7I1-88[»]
4X62X-ray3.45P1-84[»]
4X64X-ray3.35P1-84[»]
4X65X-ray3.35P1-84[»]
4X66X-ray3.45P1-84[»]
4Y4OX-ray2.301p/2p1-88[»]
4Y4PX-ray2.501p/2p1-88[»]
4YHHX-ray3.42P1-85[»]
4YPBX-ray3.40QP/XP1-88[»]
4YY3X-ray3.60P1-88[»]
4YZVX-ray3.10QP/XP1-88[»]
4Z3SX-ray2.651p/2p1-88[»]
4Z8CX-ray2.901p/2p1-88[»]
4ZERX-ray3.101p/2p1-82[»]
4ZSNX-ray3.60QP/XP1-88[»]
5A9Zelectron microscopy4.70BT1-83[»]
5AA0electron microscopy5.00BT1-83[»]
5BR8X-ray3.40P1-88[»]
5CZPX-ray3.30QP/XP1-88[»]
5D8BX-ray3.63MC/QA1-88[»]
5DFEX-ray3.10QP/XP1-88[»]
5DOXX-ray3.101p/2p1-88[»]
5DOYX-ray2.601p/2p1-88[»]
5E7KX-ray3.207A/7I1-88[»]
5E81X-ray2.957A/7I1-88[»]
5EL4X-ray3.157A/7I1-88[»]
5EL5X-ray3.157A/7I1-88[»]
5EL6X-ray3.107A/7I1-88[»]
5EL7X-ray3.157A/7I1-88[»]
5F8KX-ray2.801p/2p1-82[»]
5FDUX-ray2.901p/2p1-82[»]
5FDVX-ray2.801p/2p1-82[»]
5HAUX-ray3.001p/2p1-88[»]
5HCPX-ray2.891p/2p1-88[»]
5HCQX-ray2.801p/2p1-88[»]
5HCRX-ray2.801p/2p1-88[»]
5HD1X-ray2.701p/2p1-88[»]
5IB7X-ray2.997A/7I1-88[»]
5IB8X-ray3.137A/7I1-88[»]
5IBBX-ray2.967A/7I1-88[»]
5IMQelectron microscopy3.80T1-88[»]
5IMRelectron microscopy-T1-88[»]
5IWAX-ray3.50P1-85[»]
5J30X-ray3.20QP/XP1-88[»]
5J3CX-ray3.04QP/XP1-88[»]
5J4BX-ray2.601p/2p1-88[»]
5J4CX-ray2.801p/2p1-88[»]
5J8BX-ray2.60p1-88[»]
5LMNelectron microscopy3.55P1-88[»]
5LMOelectron microscopy4.30P1-88[»]
5LMPelectron microscopy5.35P1-88[»]
5LMQelectron microscopy4.20P1-88[»]
5LMRelectron microscopy4.45P1-88[»]
5LMSelectron microscopy5.10P1-88[»]
5LMTelectron microscopy4.15P1-88[»]
5LMUelectron microscopy4.00P1-88[»]
5LMVelectron microscopy4.90P1-88[»]
5VP2X-ray2.801p/2p1-88[»]
5W4KX-ray2.701p/2p1-88[»]
ProteinModelPortaliQ5SJH3.
SMRiQ5SJH3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SJH3.

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bS16 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K5M. Bacteria.
COG0228. LUCA.
HOGENOMiHOG000246720.
KOiK02959.
OMAiRARYWIG.
PhylomeDBiQ5SJH3.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiView protein in InterPro
IPR000307. Ribosomal_S16.
IPR023803. Ribosomal_S16_dom_sf.
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiView protein in Pfam
PF00886. Ribosomal_S16. 1 hit.
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5SJH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKIRLARFG SKHNPHYRIV VTDARRKRDG KYIEKIGYYD PRKTTPDWLK
60 70 80
VDVERARYWL SVGAQPTDTA RRLLRQAGVF RQEAREGA
Length:88
Mass (Da):10,387
Last modified:December 21, 2004 - v1
Checksum:iF8E45F06816EA96F
GO

Mass spectrometryi

Molecular mass is 10387 Da from positions 1 - 88. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD70858.1.
RefSeqiWP_011173115.1. NC_006461.1.
YP_144301.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD70858; BAD70858; BAD70858.
GeneIDi3170114.
KEGGittj:TTHA1035.
PATRICifig|300852.9.peg.1015.

Similar proteinsi

Entry informationi

Entry nameiRS16_THET8
AccessioniPrimary (citable) accession number: Q5SJH3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: December 21, 2004
Last modified: November 22, 2017
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families