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Protein
Submitted name:

Uracil-DNA glycosylase

Gene

TTHA1149

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi13Iron-sulfur (4Fe-4S)Combined sources1
Metal bindingi16Iron-sulfur (4Fe-4S)Combined sources1
Metal bindingi115Iron-sulfur (4Fe-4S)Combined sources1
Metal bindingi130Iron-sulfur (4Fe-4S)Combined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

4Fe-4SCombined sources, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-1144-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uracil-DNA glycosylaseImported
Gene namesi
Ordered Locus Names:TTHA1149Imported
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Imported
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi300852.TTHA1149.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2D3YX-ray1.55A1-219[»]
2DDGX-ray2.10A1-219[»]
2DEMX-ray1.95A1-219[»]
2DP6X-ray1.80A1-219[»]
ProteinModelPortaliQ5SJ65.
SMRiQ5SJ65.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SJ65.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini44 – 210UDGInterPro annotationAdd BLAST167

Phylogenomic databases

eggNOGiENOG4105E50. Bacteria.
COG1573. LUCA.
HOGENOMiHOG000196499.
OMAiHCAPPAN.
PhylomeDBiQ5SJ65.

Family and domain databases

Gene3Di3.40.470.10. 1 hit.
InterProiIPR005122. Uracil-DNA_glycosylase-like.
[Graphical view]
PfamiPF03167. UDG. 1 hit.
[Graphical view]
SMARTiSM00986. UDG. 1 hit.
[Graphical view]
SUPFAMiSSF52141. SSF52141. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5SJ65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDREAFVQTL TACRLCPRLV AWREEVVGRK RAFRGEPYWA RPVPGFGDPE
60 70 80 90 100
ARILLFGLAP GAHGSNRTGR PFTGDASGAF LYPLLHEAGL SSKPESLPGD
110 120 130 140 150
DLRLYGVYLT AAVRCAPPKN KPTPEELRAC ARWTEVELGL LPEVRVYVAL
160 170 180 190 200
GRIALEALLA HFGLRKSAHP FRHGAHYPLP GGRHLLASYH VSRQNTQTGR
210
LTREMFLEVL MEAKRLAGL
Length:219
Mass (Da):24,286
Last modified:December 21, 2004 - v1
Checksum:i10EE764537318207
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD70972.1.
RefSeqiWP_011173217.1. NC_006461.1.
YP_144415.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD70972; BAD70972; BAD70972.
GeneIDi3169333.
KEGGittj:TTHA1149.
PATRICi23957257. VBITheThe93045_1128.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD70972.1.
RefSeqiWP_011173217.1. NC_006461.1.
YP_144415.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2D3YX-ray1.55A1-219[»]
2DDGX-ray2.10A1-219[»]
2DEMX-ray1.95A1-219[»]
2DP6X-ray1.80A1-219[»]
ProteinModelPortaliQ5SJ65.
SMRiQ5SJ65.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA1149.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD70972; BAD70972; BAD70972.
GeneIDi3169333.
KEGGittj:TTHA1149.
PATRICi23957257. VBITheThe93045_1128.

Phylogenomic databases

eggNOGiENOG4105E50. Bacteria.
COG1573. LUCA.
HOGENOMiHOG000196499.
OMAiHCAPPAN.
PhylomeDBiQ5SJ65.

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-1144-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ5SJ65.

Family and domain databases

Gene3Di3.40.470.10. 1 hit.
InterProiIPR005122. Uracil-DNA_glycosylase-like.
[Graphical view]
PfamiPF03167. UDG. 1 hit.
[Graphical view]
SMARTiSM00986. UDG. 1 hit.
[Graphical view]
SUPFAMiSSF52141. SSF52141. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ5SJ65_THET8
AccessioniPrimary (citable) accession number: Q5SJ65
Entry historyi
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: November 2, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.