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Protein

30S ribosomal protein Thx

Gene

rpsU

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Binds at the top of the head of the 30S subunit. It stabilizes a number of different RNA elements and thus is important for subunit structure.

GO - Molecular functioni

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein Thx
Alternative name(s):
S31
Gene namesi
Name:rpsU
Ordered Locus Names:TTHA1396
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Pathology & Biotechi

Chemistry databases

DrugBankiDB08185. 2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved2 Publications
ChainiPRO_00002172022 – 2730S ribosomal protein ThxAdd BLAST26

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.

Protein-protein interaction databases

STRINGi300852.TTHA1396.

Structurei

Secondary structure

127
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi6 – 8Combined sources3
Helixi9 – 14Combined sources6
Beta strandi19 – 22Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00V2-27[»]
1HNWX-ray3.40V2-27[»]
1HNXX-ray3.40V2-27[»]
1HNZX-ray3.30V2-27[»]
1HR0X-ray3.20V2-27[»]
1I94X-ray3.20U2-27[»]
1I95X-ray4.50U2-27[»]
1I96X-ray4.20U2-27[»]
1I97X-ray4.50U2-27[»]
1IBKX-ray3.31V2-27[»]
1IBLX-ray3.11V2-27[»]
1IBMX-ray3.31V2-27[»]
1J5EX-ray3.05V2-27[»]
1JGOX-ray5.60X2-27[»]
1JGPX-ray7.00X2-27[»]
1JGQX-ray5.00X2-27[»]
1L1Umodel-V1-25[»]
1ML5electron microscopy14.00X2-27[»]
1N32X-ray3.00V2-27[»]
1N33X-ray3.35V2-27[»]
1N34X-ray3.80V2-27[»]
1N36X-ray3.65V2-27[»]
1VVJX-ray3.44QU/XU1-27[»]
1VY4X-ray2.60AU/CU1-27[»]
1VY5X-ray2.55AU/CU1-27[»]
1VY6X-ray2.90AU/CU1-27[»]
1VY7X-ray2.80AU/CU1-27[»]
1XMOX-ray3.25V1-27[»]
1XMQX-ray3.00V1-27[»]
1XNQX-ray3.05V1-27[»]
1XNRX-ray3.10V1-27[»]
2E5LX-ray3.30V2-27[»]
2HHHX-ray3.35U1-27[»]
2UU9X-ray3.10U2-27[»]
2UUAX-ray2.90U2-27[»]
2UUBX-ray2.80U2-27[»]
2UUCX-ray3.10U2-27[»]
2UXBX-ray3.10U2-27[»]
2UXCX-ray2.90U2-27[»]
2UXDX-ray3.20V2-27[»]
2VQEX-ray2.50U1-27[»]
2VQFX-ray2.90U1-27[»]
2ZM6X-ray3.30V2-27[»]
3OTOX-ray3.69U1-27[»]
3T1HX-ray3.11V1-27[»]
3T1YX-ray2.80V1-27[»]
4AQYX-ray3.50V2-27[»]
4B3MX-ray2.90V2-27[»]
4B3RX-ray3.00V2-27[»]
4B3SX-ray3.15V2-27[»]
4B3TX-ray3.00V2-27[»]
4DR1X-ray3.60U1-27[»]
4DR2X-ray3.25U1-27[»]
4DR3X-ray3.35U1-27[»]
4DR4X-ray3.97U1-27[»]
4DR5X-ray3.45U1-27[»]
4DR6X-ray3.30U1-27[»]
4DR7X-ray3.75U1-27[»]
4DUYX-ray3.39U1-27[»]
4DUZX-ray3.65U1-27[»]
4DV0X-ray3.85U1-27[»]
4DV1X-ray3.85U1-27[»]
4DV2X-ray3.65U1-27[»]
4DV3X-ray3.55U1-27[»]
4DV4X-ray3.65U1-27[»]
4DV5X-ray3.68U1-27[»]
4DV6X-ray3.30U1-27[»]
4DV7X-ray3.29U1-27[»]
4GKJX-ray3.30V2-25[»]
4GKKX-ray3.20V2-25[»]
4JI0X-ray3.49U1-27[»]
4JI1X-ray3.14U1-27[»]
4JI2X-ray3.64U1-27[»]
4JI3X-ray3.35U1-27[»]
4JI4X-ray3.69U1-27[»]
4JI5X-ray3.85U1-27[»]
4JI6X-ray3.55U1-27[»]
4JI7X-ray3.50U1-27[»]
4JI8X-ray3.74U1-27[»]
4JV5X-ray3.16U2-25[»]
4JYAX-ray3.10U2-25[»]
4K0KX-ray3.40U2-26[»]
4KHPX-ray3.10U2-25[»]
4L47X-ray3.22QU/XU1-27[»]
4L71X-ray3.90QU/XU1-27[»]
4LELX-ray3.90QU/XU1-27[»]
4LF4X-ray3.34U1-27[»]
4LF5X-ray3.75U1-27[»]
4LF6X-ray3.31U1-27[»]
4LF7X-ray3.15U1-27[»]
4LF8X-ray3.15U1-27[»]
4LF9X-ray3.28U1-27[»]
4LFAX-ray3.65U1-27[»]
4LFBX-ray3.01U1-27[»]
4LFCX-ray3.60U1-27[»]
4LFZX-ray3.92QU/XU1-27[»]
4LNTX-ray2.94QU/XU1-27[»]
4LSKX-ray3.48QU/XU1-27[»]
4LT8X-ray3.14QU/XU1-27[»]
4NXMX-ray3.65U1-27[»]
4NXNX-ray3.54U1-27[»]
4OX9X-ray3.80V2-27[»]
4P6FX-ray3.60QU/XU1-27[»]
4P70X-ray3.68QU/XU1-27[»]
4TUAX-ray3.60QU/XU1-27[»]
4TUBX-ray3.60QU/XU1-27[»]
4TUCX-ray3.60QU/XU1-27[»]
4TUDX-ray3.60QU/XU1-27[»]
4TUEX-ray3.50QU/XU1-27[»]
4V42X-ray5.50AX2-27[»]
4V4IX-ray3.71v1-27[»]
4V4PX-ray5.50BX1-27[»]
4V4RX-ray5.90AU1-27[»]
4V4SX-ray6.76AU1-27[»]
4V4TX-ray6.46AU1-27[»]
4V4XX-ray5.00AX1-27[»]
4V4YX-ray5.50AX1-27[»]
4V4ZX-ray4.51AX1-27[»]
4V51X-ray2.80AU/CU2-27[»]
4V5AX-ray3.50AU/CU2-27[»]
4V5CX-ray3.30AU/CU1-27[»]
4V5DX-ray3.50AU/CU1-27[»]
4V5EX-ray3.45AU/CU1-27[»]
4V5FX-ray3.60AU/CU1-27[»]
4V5GX-ray3.60AU/CU1-27[»]
4V5JX-ray3.10AU/CU1-27[»]
4V5KX-ray3.20AU/CU1-27[»]
4V5LX-ray3.10AU1-27[»]
4V5Melectron microscopy7.80AU1-27[»]
4V5Nelectron microscopy7.60AU1-27[»]
4V5PX-ray3.10AU/CU1-27[»]
4V5QX-ray3.10AU/CU1-27[»]
4V5RX-ray3.10AU/CU1-27[»]
4V5SX-ray3.10AU/CU1-27[»]
4V68electron microscopy6.40AU2-26[»]
4V6AX-ray3.10AU/CU1-27[»]
4V6FX-ray3.10BX/CX1-27[»]
4V6GX-ray3.50AX/CX1-27[»]
4V7JX-ray3.30Au/Bu1-27[»]
4V7KX-ray3.60Au/Bu1-27[»]
4V7LX-ray3.00AU/CU1-27[»]
4V7MX-ray3.45AU/CU1-27[»]
4V7WX-ray3.00AU/CU1-27[»]
4V7XX-ray3.00AU/CU1-27[»]
4V7YX-ray3.00AU/CU1-27[»]
4V7ZX-ray3.10AU/CU1-27[»]
4V87X-ray3.10BX/CX1-27[»]
4V8AX-ray3.20CU/DU1-27[»]
4V8BX-ray3.00AX/CX1-27[»]
4V8CX-ray3.30CX/DX1-27[»]
4V8DX-ray3.00AX/CX1-27[»]
4V8EX-ray3.30BX/DX1-27[»]
4V8FX-ray3.30BX/CX1-27[»]
4V8GX-ray3.00AU/CU1-27[»]
4V8HX-ray3.10AU/CU1-27[»]
4V8IX-ray2.70AU/CU1-27[»]
4V8JX-ray3.90AU/CU1-27[»]
4V8NX-ray3.10AU/CU1-27[»]
4V8OX-ray3.80AU1-27[»]
4V8QX-ray3.10BU1-27[»]
4V8UX-ray3.70AU/CU1-27[»]
4V8XX-ray3.35AU/CU1-27[»]
4V90X-ray2.95AU1-27[»]
4V95X-ray3.20AU/CU1-27[»]
4V97X-ray3.52AU/CU1-27[»]
4V9AX-ray3.30AX/CX1-27[»]
4V9BX-ray3.10AX/CX1-27[»]
4V9HX-ray2.86AU2-25[»]
4V9IX-ray3.30AU/CU2-25[»]
4V9RX-ray3.00AU/CU1-27[»]
4V9SX-ray3.10AU/CU1-27[»]
4W2EX-ray2.90u1-27[»]
4W2FX-ray2.40AU/CU1-27[»]
4W2GX-ray2.55AU/CU1-27[»]
4W2HX-ray2.70AU/CU1-27[»]
4W2IX-ray2.70AU/CU1-27[»]
4W4GX-ray3.30QU/XU2-26[»]
4WPOX-ray2.80BU/DU1-27[»]
4WQ1X-ray3.101B/1F1-27[»]
4WQFX-ray2.80BU/DU1-27[»]
4WQRX-ray3.151B/1F1-27[»]
4WQUX-ray2.80BU/DU1-27[»]
4WQYX-ray2.80BU/DU1-27[»]
4WR6X-ray3.051B/1F1-27[»]
4WRAX-ray3.051B/1F1-27[»]
4WROX-ray3.051F1-27[»]
4WSDX-ray2.951B/1F1-27[»]
4WSMX-ray3.301B/1F1-27[»]
4WT1X-ray3.051B/1F1-27[»]
4WT8X-ray3.40AW/BW2-25[»]
4WU1X-ray3.201B/1F1-27[»]
4WZDX-ray3.101B/1F1-27[»]
4WZOX-ray3.301B/1F1-27[»]
4X62X-ray3.45U2-26[»]
4X64X-ray3.35U2-26[»]
4X65X-ray3.35U2-26[»]
4X66X-ray3.45U2-26[»]
4Y4OX-ray2.301u/2u1-27[»]
4Y4PX-ray2.501u/2u1-27[»]
4YHHX-ray3.42V2-25[»]
4YPBX-ray3.40QU/XU1-27[»]
4YY3X-ray3.60V1-27[»]
4YZVX-ray3.10QU/XU2-26[»]
4Z3SX-ray2.651u/2u1-27[»]
4Z8CX-ray2.901u/2u1-27[»]
4ZERX-ray3.101u/2u2-24[»]
4ZSNX-ray3.60QU/XU2-26[»]
5AA0electron microscopy5.00BY2-25[»]
5BR8X-ray3.40U1-27[»]
5CZPX-ray3.30QU/XU1-27[»]
5D8BX-ray3.63RC/VA1-27[»]
5DFEX-ray3.10QU/XU1-27[»]
5DOXX-ray3.101u/2u1-27[»]
5DOYX-ray2.601u/2u1-27[»]
5E7KX-ray3.201B/1F1-27[»]
5E81X-ray2.951B/1F1-27[»]
5EL4X-ray3.151B/1F1-27[»]
5EL5X-ray3.151B/1F1-27[»]
5EL6X-ray3.101B/1F1-27[»]
5EL7X-ray3.151B/1F1-27[»]
5F8KX-ray2.801u/2u2-24[»]
5FDUX-ray2.901u/2u2-24[»]
5FDVX-ray2.801u/2u2-24[»]
5HAUX-ray3.001u/2u1-27[»]
5HCPX-ray2.891u/2u1-27[»]
5HCQX-ray2.801u/2u1-27[»]
5HCRX-ray2.801u/2u1-27[»]
5HD1X-ray2.701u/2u1-27[»]
5IB7X-ray2.991B/1F1-27[»]
5IB8X-ray3.131B/1F1-27[»]
5IBBX-ray2.961B/1F1-27[»]
5IMQelectron microscopy3.80Y1-27[»]
5IMRelectron microscopy-Y1-27[»]
5IWAX-ray3.50V2-25[»]
5J30X-ray3.20QU/XU1-27[»]
5J3CX-ray3.04QU/XU1-27[»]
5J4BX-ray2.601u/2u1-27[»]
5J4CX-ray2.801u/2u1-27[»]
5J8BX-ray2.60u1-27[»]
5LMNelectron microscopy3.55V1-27[»]
5LMOelectron microscopy4.30V1-27[»]
5LMPelectron microscopy5.35V1-27[»]
5LMQelectron microscopy4.20V1-27[»]
5LMRelectron microscopy4.45V1-27[»]
5LMSelectron microscopy5.10V1-27[»]
5LMTelectron microscopy4.15V1-27[»]
5LMUelectron microscopy4.00V1-27[»]
5LMVelectron microscopy4.90V1-27[»]
SMRiQ5SIH3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SIH3.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK19033.

Family and domain databases

InterProiView protein in InterPro
IPR030826. Ribo_THX.
IPR031414. Thx.
PfamiView protein in Pfam
PF17070. Thx. 1 hit.
TIGRFAMsiTIGR04560. ribo_THX. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5SIH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20 
MGKGDRRTRR GKIWRGTYGK YRPRKKK
Length:27
Mass (Da):3,337
Last modified:January 23, 2007 - v3
Checksum:i85822DC5D8D8C604
GO

Mass spectrometryi

Molecular mass is 3206 Da from positions 2 - 27. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ295159 Genomic DNA. Translation: CAC15068.1.
AP008226 Genomic DNA. Translation: BAD71219.1.
PIRiS33869.
RefSeqiWP_008632889.1. NC_006461.1.
YP_144662.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD71219; BAD71219; BAD71219.
GeneIDi3168745.
KEGGittj:TTHA1396.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRSHX_THET8
AccessioniPrimary (citable) accession number: Q5SIH3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: January 23, 2007
Last modified: July 5, 2017
This is version 109 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families