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Protein

30S ribosomal protein S5

Gene

rpsE

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

With S4 and S12 plays an important role in translational accuracy.By similarity
Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Binds mRNA in the 70S ribosome, positioning it for translation.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S5
Gene namesi
Name:rpsE
Ordered Locus Names:TTHA1675
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001316212 – 16230S ribosomal protein S5Add BLAST161

Proteomic databases

PRIDEiQ5SHQ5.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.

Protein-protein interaction databases

STRINGi300852.TTHA1675.

Structurei

Secondary structure

1162
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi7 – 20Combined sources14
Beta strandi23 – 35Combined sources13
Beta strandi37 – 50Combined sources14
Helixi51 – 62Combined sources12
Beta strandi65 – 68Combined sources4
Beta strandi72 – 75Combined sources4
Beta strandi80 – 84Combined sources5
Beta strandi87 – 93Combined sources7
Beta strandi96 – 98Combined sources3
Beta strandi100 – 102Combined sources3
Helixi104 – 111Combined sources8
Turni112 – 114Combined sources3
Beta strandi117 – 124Combined sources8
Helixi128 – 141Combined sources14
Helixi145 – 151Combined sources7
Helixi154 – 156Combined sources3
Turni157 – 159Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00E1-162[»]
1FKAX-ray3.30E1-162[»]
1HNWX-ray3.40E1-162[»]
1HNXX-ray3.40E1-162[»]
1HNZX-ray3.30E1-162[»]
1HR0X-ray3.20E1-162[»]
1I94X-ray3.20E2-162[»]
1I95X-ray4.50E2-162[»]
1I96X-ray4.20E2-162[»]
1I97X-ray4.50E2-162[»]
1IBKX-ray3.31E1-162[»]
1IBLX-ray3.11E1-162[»]
1IBMX-ray3.31E1-162[»]
1J5EX-ray3.05E2-162[»]
1JGOX-ray5.60H1-162[»]
1JGPX-ray7.00H1-162[»]
1JGQX-ray5.00H1-162[»]
1L1Umodel-E5-154[»]
1ML5electron microscopy14.00H1-162[»]
1N32X-ray3.00E2-162[»]
1N33X-ray3.35E2-162[»]
1N34X-ray3.80E2-162[»]
1N36X-ray3.65E2-162[»]
1QD7X-ray5.50D22-130[»]
1VVJX-ray3.44QE/XE1-162[»]
1VY4X-ray2.60AE/CE1-162[»]
1VY5X-ray2.55AE/CE1-162[»]
1VY6X-ray2.90AE/CE1-162[»]
1VY7X-ray2.80AE/CE1-162[»]
1XMOX-ray3.25E1-162[»]
1XMQX-ray3.00E1-162[»]
1XNQX-ray3.05E1-162[»]
1XNRX-ray3.10E1-162[»]
2E5LX-ray3.30E2-162[»]
2F4VX-ray3.80E1-162[»]
2HHHX-ray3.35E1-162[»]
2UU9X-ray3.10E2-162[»]
2UUAX-ray2.90E2-162[»]
2UUBX-ray2.80E2-162[»]
2UUCX-ray3.10E2-162[»]
2UXBX-ray3.10E2-162[»]
2UXCX-ray2.90E2-162[»]
2UXDX-ray3.20E2-162[»]
2VQEX-ray2.50E1-162[»]
2VQFX-ray2.90E1-162[»]
2ZM6X-ray3.30E2-162[»]
3OTOX-ray3.69E1-162[»]
3T1HX-ray3.11E1-162[»]
3T1YX-ray2.80E1-162[»]
4AQYX-ray3.50E2-162[»]
4B3MX-ray2.90E2-162[»]
4B3RX-ray3.00E2-162[»]
4B3SX-ray3.15E2-162[»]
4B3TX-ray3.00E2-162[»]
4DR1X-ray3.60E1-162[»]
4DR2X-ray3.25E1-162[»]
4DR3X-ray3.35E1-162[»]
4DR4X-ray3.97E1-162[»]
4DR5X-ray3.45E1-162[»]
4DR6X-ray3.30E1-162[»]
4DR7X-ray3.75E1-162[»]
4DUYX-ray3.39E1-162[»]
4DUZX-ray3.65E1-162[»]
4DV0X-ray3.85E1-162[»]
4DV1X-ray3.85E1-162[»]
4DV2X-ray3.65E1-162[»]
4DV3X-ray3.55E1-162[»]
4DV4X-ray3.65E1-162[»]
4DV5X-ray3.68E1-162[»]
4DV6X-ray3.30E1-162[»]
4DV7X-ray3.29E1-162[»]
4GKJX-ray3.30E5-154[»]
4GKKX-ray3.20E5-154[»]
4JI0X-ray3.49E1-162[»]
4JI1X-ray3.14E1-162[»]
4JI2X-ray3.64E1-162[»]
4JI3X-ray3.35E1-162[»]
4JI4X-ray3.69E1-162[»]
4JI5X-ray3.85E1-162[»]
4JI6X-ray3.55E1-162[»]
4JI7X-ray3.50E1-162[»]
4JI8X-ray3.74E1-162[»]
4JV5X-ray3.16E5-154[»]
4JYAX-ray3.10E5-154[»]
4K0KX-ray3.40E5-155[»]
4KHPX-ray3.10E5-154[»]
4L47X-ray3.22QE/XE1-162[»]
4L71X-ray3.90QE/XE1-162[»]
4LELX-ray3.90QE/XE1-162[»]
4LF4X-ray3.34E1-162[»]
4LF5X-ray3.75E1-162[»]
4LF6X-ray3.31E1-162[»]
4LF7X-ray3.15E1-162[»]
4LF8X-ray3.15E1-162[»]
4LF9X-ray3.28E1-162[»]
4LFAX-ray3.65E1-162[»]
4LFBX-ray3.01E1-162[»]
4LFCX-ray3.60E1-162[»]
4LFZX-ray3.92QE/XE1-162[»]
4LNTX-ray2.94QE/XE1-162[»]
4LSKX-ray3.48QE/XE1-162[»]
4LT8X-ray3.14QE/XE1-162[»]
4NXMX-ray3.65E1-162[»]
4NXNX-ray3.54E1-162[»]
4OX9X-ray3.80E2-162[»]
4P6FX-ray3.60QE/XE1-162[»]
4P70X-ray3.68QE/XE1-162[»]
4TUAX-ray3.60QE/XE1-162[»]
4TUBX-ray3.60QE/XE1-162[»]
4TUCX-ray3.60QE/XE1-162[»]
4TUDX-ray3.60QE/XE1-162[»]
4TUEX-ray3.50QE/XE1-162[»]
4V42X-ray5.50AH1-162[»]
4V49X-ray8.70E5-154[»]
4V4AX-ray9.50E5-154[»]
4V4GX-ray11.50E5-154[»]
4V4IX-ray3.71f-[»]
4V4PX-ray5.50BH1-162[»]
4V4RX-ray5.90AE1-162[»]
4V4SX-ray6.76AE1-162[»]
4V4TX-ray6.46AE1-162[»]
4V4XX-ray5.00AH1-162[»]
4V4YX-ray5.50AH1-162[»]
4V4ZX-ray4.51AH1-162[»]
4V51X-ray2.80AE/CE2-162[»]
4V5AX-ray3.50AE/CE2-162[»]
4V5CX-ray3.30AE/CE1-162[»]
4V5DX-ray3.50AE/CE1-162[»]
4V5EX-ray3.45AE/CE1-162[»]
4V5FX-ray3.60AE/CE1-162[»]
4V5GX-ray3.60AE/CE1-162[»]
4V5JX-ray3.10AE/CE1-162[»]
4V5KX-ray3.20AE/CE1-162[»]
4V5LX-ray3.10AE1-162[»]
4V5Melectron microscopy7.80AE1-162[»]
4V5Nelectron microscopy7.60AE1-162[»]
4V5PX-ray3.10AE/CE1-162[»]
4V5QX-ray3.10AE/CE1-162[»]
4V5RX-ray3.10AE/CE1-162[»]
4V5SX-ray3.10AE/CE1-162[»]
4V68electron microscopy6.40AE5-155[»]
4V6AX-ray3.10AE/CE1-162[»]
4V6FX-ray3.10BH/CH1-162[»]
4V6GX-ray3.50AH/CH1-162[»]
4V7JX-ray3.30Ae/Be1-162[»]
4V7KX-ray3.60Ae/Be1-162[»]
4V7LX-ray3.00AE/CE1-162[»]
4V7MX-ray3.45AE/CE1-162[»]
4V7WX-ray3.00AE/CE1-162[»]
4V7XX-ray3.00AE/CE1-160[»]
4V7YX-ray3.00AE/CE1-162[»]
4V7ZX-ray3.10AE/CE1-162[»]
4V87X-ray3.10BH/CH1-162[»]
4V8AX-ray3.20CE/DE1-162[»]
4V8BX-ray3.00AH/CH1-162[»]
4V8CX-ray3.30CH/DH1-162[»]
4V8DX-ray3.00AH/CH1-162[»]
4V8EX-ray3.30BH/DH1-162[»]
4V8FX-ray3.30BH/CH1-162[»]
4V8GX-ray3.00AE/CE1-162[»]
4V8HX-ray3.10AE/CE1-162[»]
4V8IX-ray2.70AE/CE1-162[»]
4V8JX-ray3.90AE/CE1-162[»]
4V8NX-ray3.10AE/CE1-162[»]
4V8OX-ray3.80AE1-162[»]
4V8QX-ray3.10BE1-162[»]
4V8UX-ray3.70AE/CE1-162[»]
4V8XX-ray3.35AE/CE1-162[»]
4V90X-ray2.95AE1-162[»]
4V95X-ray3.20AE/CE1-162[»]
4V97X-ray3.52AE/CE1-162[»]
4V9AX-ray3.30AH/CH1-162[»]
4V9BX-ray3.10AH/CH1-162[»]
4V9HX-ray2.86AE5-154[»]
4V9IX-ray3.30AE/CE5-154[»]
4V9RX-ray3.00AE/CE1-162[»]
4V9SX-ray3.10AE/CE1-162[»]
4W2EX-ray2.90e1-162[»]
4W2FX-ray2.40AE/CE1-162[»]
4W2GX-ray2.55AE/CE1-162[»]
4W2HX-ray2.70AE/CE1-162[»]
4W2IX-ray2.70AE/CE1-162[»]
4W4GX-ray3.30QE/XE1-162[»]
4WPOX-ray2.80BE/DE1-162[»]
4WQ1X-ray3.1042/4E1-162[»]
4WQFX-ray2.80BE/DE1-162[»]
4WQRX-ray3.1542/4E1-162[»]
4WQUX-ray2.80BE/DE1-162[»]
4WQYX-ray2.80BE/DE1-162[»]
4WR6X-ray3.0542/4E1-162[»]
4WRAX-ray3.0542/4E1-162[»]
4WROX-ray3.054E1-162[»]
4WSDX-ray2.9542/4E1-162[»]
4WSMX-ray3.3042/4E1-162[»]
4WT1X-ray3.0542/4E1-162[»]
4WT8X-ray3.40AE/BE5-154[»]
4WU1X-ray3.2042/4E1-162[»]
4WZDX-ray3.1042/4E1-162[»]
4WZOX-ray3.3042/4E1-162[»]
4X62X-ray3.45E5-155[»]
4X64X-ray3.35E5-155[»]
4X65X-ray3.35E5-155[»]
4X66X-ray3.45E5-155[»]
4Y4OX-ray2.301e/2e1-162[»]
4Y4PX-ray2.501e/2e1-162[»]
4YHHX-ray3.42E5-161[»]
4YPBX-ray3.40QE/XE1-162[»]
4YY3X-ray3.60E1-162[»]
4YZVX-ray3.10QE/XE1-162[»]
4Z3SX-ray2.651e/2e1-162[»]
4Z8CX-ray2.901e/2e1-162[»]
4ZERX-ray3.101e/2e5-152[»]
4ZSNX-ray3.60QE/XE1-162[»]
5A9Zelectron microscopy4.70BI5-154[»]
5AA0electron microscopy5.00BI5-154[»]
5BR8X-ray3.40E1-162[»]
5CZPX-ray3.30QE/XE1-162[»]
5D8BX-ray3.63BC/FA1-162[»]
5DFEX-ray3.10QE/XE1-162[»]
5DOXX-ray3.101e/2e1-162[»]
5DOYX-ray2.601e/2e1-162[»]
5E7KX-ray3.2042/4E1-162[»]
5E81X-ray2.9542/4E1-162[»]
5EL4X-ray3.1542/4E1-162[»]
5EL5X-ray3.1542/4E1-162[»]
5EL6X-ray3.1042/4E1-162[»]
5EL7X-ray3.1542/4E1-162[»]
5F8KX-ray2.801e/2e5-152[»]
5FDUX-ray2.901e/2e5-152[»]
5FDVX-ray2.801e/2e5-152[»]
5HAUX-ray3.001e/2e1-162[»]
5HCPX-ray2.891e/2e1-162[»]
5HCQX-ray2.801e/2e1-162[»]
5HCRX-ray2.801e/2e1-162[»]
5HD1X-ray2.701e/2e1-162[»]
5IB7X-ray2.9942/4E1-162[»]
5IB8X-ray3.1342/4E1-162[»]
5IBBX-ray2.9642/4E1-162[»]
5IMQelectron microscopy3.80I1-162[»]
5IMRelectron microscopy-I1-162[»]
5IWAX-ray3.50E5-161[»]
5J30X-ray3.20QE/XE1-162[»]
5J3CX-ray3.04QE/XE1-162[»]
5J4BX-ray2.601e/2e1-162[»]
5J4CX-ray2.801e/2e1-162[»]
5J8BX-ray2.60e1-162[»]
5LMNelectron microscopy3.55E1-162[»]
5LMOelectron microscopy4.30E1-162[»]
5LMPelectron microscopy5.35E1-162[»]
5LMQelectron microscopy4.20E1-162[»]
5LMRelectron microscopy4.45E1-162[»]
5LMSelectron microscopy5.10E1-162[»]
5LMTelectron microscopy4.15E1-162[»]
5LMUelectron microscopy4.00E1-162[»]
5LMVelectron microscopy4.90E1-162[»]
ProteinModelPortaliQ5SHQ5.
SMRiQ5SHQ5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SHQ5.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 69S5 DRBMAdd BLAST64

Domaini

The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.

Sequence similaritiesi

Belongs to the ribosomal protein S5P family.Curated
Contains 1 S5 DRBM domain.Curated

Phylogenomic databases

eggNOGiENOG4108RA9. Bacteria.
COG0098. LUCA.
HOGENOMiHOG000072595.
KOiK02988.
OMAiHKYNASK.
PhylomeDBiQ5SHQ5.

Family and domain databases

Gene3Di3.30.160.20. 1 hit.
3.30.230.10. 1 hit.
HAMAPiMF_01307_B. Ribosomal_S5_B. 1 hit.
InterProiIPR014720. dsRBD_dom.
IPR000851. Ribosomal_S5.
IPR005712. Ribosomal_S5_bac-type.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
[Graphical view]
PANTHERiPTHR13718. PTHR13718. 1 hit.
PfamiPF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
TIGRFAMsiTIGR01021. rpsE_bact. 1 hit.
PROSITEiPS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5SHQ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPETDFEEKM ILIRRTARMQ AGGRRFRFGA LVVVGDRQGR VGLGFGKAPE
60 70 80 90 100
VPLAVQKAGY YARRNMVEVP LQNGTIPHEI EVEFGASKIV LKPAAPGTGV
110 120 130 140 150
IAGAVPRAIL ELAGVTDILT KELGSRNPIN IAYATMEALR QLRTKADVER
160
LRKGEAHAQA QG
Length:162
Mass (Da):17,557
Last modified:January 23, 2007 - v3
Checksum:iBE3367CB619E68D2
GO

Mass spectrometryi

Molecular mass is 17428 Da from positions 2 - 162. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD71498.1.
RefSeqiWP_008633389.1. NC_006461.1.
YP_144941.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD71498; BAD71498; BAD71498.
GeneIDi3169827.
KEGGittj:TTHA1675.
PATRICi23958305. VBITheThe93045_1645.

Cross-referencesi

Web resourcesi

T.thermophilus ribosome structure and function

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD71498.1.
RefSeqiWP_008633389.1. NC_006461.1.
YP_144941.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00E1-162[»]
1FKAX-ray3.30E1-162[»]
1HNWX-ray3.40E1-162[»]
1HNXX-ray3.40E1-162[»]
1HNZX-ray3.30E1-162[»]
1HR0X-ray3.20E1-162[»]
1I94X-ray3.20E2-162[»]
1I95X-ray4.50E2-162[»]
1I96X-ray4.20E2-162[»]
1I97X-ray4.50E2-162[»]
1IBKX-ray3.31E1-162[»]
1IBLX-ray3.11E1-162[»]
1IBMX-ray3.31E1-162[»]
1J5EX-ray3.05E2-162[»]
1JGOX-ray5.60H1-162[»]
1JGPX-ray7.00H1-162[»]
1JGQX-ray5.00H1-162[»]
1L1Umodel-E5-154[»]
1ML5electron microscopy14.00H1-162[»]
1N32X-ray3.00E2-162[»]
1N33X-ray3.35E2-162[»]
1N34X-ray3.80E2-162[»]
1N36X-ray3.65E2-162[»]
1QD7X-ray5.50D22-130[»]
1VVJX-ray3.44QE/XE1-162[»]
1VY4X-ray2.60AE/CE1-162[»]
1VY5X-ray2.55AE/CE1-162[»]
1VY6X-ray2.90AE/CE1-162[»]
1VY7X-ray2.80AE/CE1-162[»]
1XMOX-ray3.25E1-162[»]
1XMQX-ray3.00E1-162[»]
1XNQX-ray3.05E1-162[»]
1XNRX-ray3.10E1-162[»]
2E5LX-ray3.30E2-162[»]
2F4VX-ray3.80E1-162[»]
2HHHX-ray3.35E1-162[»]
2UU9X-ray3.10E2-162[»]
2UUAX-ray2.90E2-162[»]
2UUBX-ray2.80E2-162[»]
2UUCX-ray3.10E2-162[»]
2UXBX-ray3.10E2-162[»]
2UXCX-ray2.90E2-162[»]
2UXDX-ray3.20E2-162[»]
2VQEX-ray2.50E1-162[»]
2VQFX-ray2.90E1-162[»]
2ZM6X-ray3.30E2-162[»]
3OTOX-ray3.69E1-162[»]
3T1HX-ray3.11E1-162[»]
3T1YX-ray2.80E1-162[»]
4AQYX-ray3.50E2-162[»]
4B3MX-ray2.90E2-162[»]
4B3RX-ray3.00E2-162[»]
4B3SX-ray3.15E2-162[»]
4B3TX-ray3.00E2-162[»]
4DR1X-ray3.60E1-162[»]
4DR2X-ray3.25E1-162[»]
4DR3X-ray3.35E1-162[»]
4DR4X-ray3.97E1-162[»]
4DR5X-ray3.45E1-162[»]
4DR6X-ray3.30E1-162[»]
4DR7X-ray3.75E1-162[»]
4DUYX-ray3.39E1-162[»]
4DUZX-ray3.65E1-162[»]
4DV0X-ray3.85E1-162[»]
4DV1X-ray3.85E1-162[»]
4DV2X-ray3.65E1-162[»]
4DV3X-ray3.55E1-162[»]
4DV4X-ray3.65E1-162[»]
4DV5X-ray3.68E1-162[»]
4DV6X-ray3.30E1-162[»]
4DV7X-ray3.29E1-162[»]
4GKJX-ray3.30E5-154[»]
4GKKX-ray3.20E5-154[»]
4JI0X-ray3.49E1-162[»]
4JI1X-ray3.14E1-162[»]
4JI2X-ray3.64E1-162[»]
4JI3X-ray3.35E1-162[»]
4JI4X-ray3.69E1-162[»]
4JI5X-ray3.85E1-162[»]
4JI6X-ray3.55E1-162[»]
4JI7X-ray3.50E1-162[»]
4JI8X-ray3.74E1-162[»]
4JV5X-ray3.16E5-154[»]
4JYAX-ray3.10E5-154[»]
4K0KX-ray3.40E5-155[»]
4KHPX-ray3.10E5-154[»]
4L47X-ray3.22QE/XE1-162[»]
4L71X-ray3.90QE/XE1-162[»]
4LELX-ray3.90QE/XE1-162[»]
4LF4X-ray3.34E1-162[»]
4LF5X-ray3.75E1-162[»]
4LF6X-ray3.31E1-162[»]
4LF7X-ray3.15E1-162[»]
4LF8X-ray3.15E1-162[»]
4LF9X-ray3.28E1-162[»]
4LFAX-ray3.65E1-162[»]
4LFBX-ray3.01E1-162[»]
4LFCX-ray3.60E1-162[»]
4LFZX-ray3.92QE/XE1-162[»]
4LNTX-ray2.94QE/XE1-162[»]
4LSKX-ray3.48QE/XE1-162[»]
4LT8X-ray3.14QE/XE1-162[»]
4NXMX-ray3.65E1-162[»]
4NXNX-ray3.54E1-162[»]
4OX9X-ray3.80E2-162[»]
4P6FX-ray3.60QE/XE1-162[»]
4P70X-ray3.68QE/XE1-162[»]
4TUAX-ray3.60QE/XE1-162[»]
4TUBX-ray3.60QE/XE1-162[»]
4TUCX-ray3.60QE/XE1-162[»]
4TUDX-ray3.60QE/XE1-162[»]
4TUEX-ray3.50QE/XE1-162[»]
4V42X-ray5.50AH1-162[»]
4V49X-ray8.70E5-154[»]
4V4AX-ray9.50E5-154[»]
4V4GX-ray11.50E5-154[»]
4V4IX-ray3.71f-[»]
4V4PX-ray5.50BH1-162[»]
4V4RX-ray5.90AE1-162[»]
4V4SX-ray6.76AE1-162[»]
4V4TX-ray6.46AE1-162[»]
4V4XX-ray5.00AH1-162[»]
4V4YX-ray5.50AH1-162[»]
4V4ZX-ray4.51AH1-162[»]
4V51X-ray2.80AE/CE2-162[»]
4V5AX-ray3.50AE/CE2-162[»]
4V5CX-ray3.30AE/CE1-162[»]
4V5DX-ray3.50AE/CE1-162[»]
4V5EX-ray3.45AE/CE1-162[»]
4V5FX-ray3.60AE/CE1-162[»]
4V5GX-ray3.60AE/CE1-162[»]
4V5JX-ray3.10AE/CE1-162[»]
4V5KX-ray3.20AE/CE1-162[»]
4V5LX-ray3.10AE1-162[»]
4V5Melectron microscopy7.80AE1-162[»]
4V5Nelectron microscopy7.60AE1-162[»]
4V5PX-ray3.10AE/CE1-162[»]
4V5QX-ray3.10AE/CE1-162[»]
4V5RX-ray3.10AE/CE1-162[»]
4V5SX-ray3.10AE/CE1-162[»]
4V68electron microscopy6.40AE5-155[»]
4V6AX-ray3.10AE/CE1-162[»]
4V6FX-ray3.10BH/CH1-162[»]
4V6GX-ray3.50AH/CH1-162[»]
4V7JX-ray3.30Ae/Be1-162[»]
4V7KX-ray3.60Ae/Be1-162[»]
4V7LX-ray3.00AE/CE1-162[»]
4V7MX-ray3.45AE/CE1-162[»]
4V7WX-ray3.00AE/CE1-162[»]
4V7XX-ray3.00AE/CE1-160[»]
4V7YX-ray3.00AE/CE1-162[»]
4V7ZX-ray3.10AE/CE1-162[»]
4V87X-ray3.10BH/CH1-162[»]
4V8AX-ray3.20CE/DE1-162[»]
4V8BX-ray3.00AH/CH1-162[»]
4V8CX-ray3.30CH/DH1-162[»]
4V8DX-ray3.00AH/CH1-162[»]
4V8EX-ray3.30BH/DH1-162[»]
4V8FX-ray3.30BH/CH1-162[»]
4V8GX-ray3.00AE/CE1-162[»]
4V8HX-ray3.10AE/CE1-162[»]
4V8IX-ray2.70AE/CE1-162[»]
4V8JX-ray3.90AE/CE1-162[»]
4V8NX-ray3.10AE/CE1-162[»]
4V8OX-ray3.80AE1-162[»]
4V8QX-ray3.10BE1-162[»]
4V8UX-ray3.70AE/CE1-162[»]
4V8XX-ray3.35AE/CE1-162[»]
4V90X-ray2.95AE1-162[»]
4V95X-ray3.20AE/CE1-162[»]
4V97X-ray3.52AE/CE1-162[»]
4V9AX-ray3.30AH/CH1-162[»]
4V9BX-ray3.10AH/CH1-162[»]
4V9HX-ray2.86AE5-154[»]
4V9IX-ray3.30AE/CE5-154[»]
4V9RX-ray3.00AE/CE1-162[»]
4V9SX-ray3.10AE/CE1-162[»]
4W2EX-ray2.90e1-162[»]
4W2FX-ray2.40AE/CE1-162[»]
4W2GX-ray2.55AE/CE1-162[»]
4W2HX-ray2.70AE/CE1-162[»]
4W2IX-ray2.70AE/CE1-162[»]
4W4GX-ray3.30QE/XE1-162[»]
4WPOX-ray2.80BE/DE1-162[»]
4WQ1X-ray3.1042/4E1-162[»]
4WQFX-ray2.80BE/DE1-162[»]
4WQRX-ray3.1542/4E1-162[»]
4WQUX-ray2.80BE/DE1-162[»]
4WQYX-ray2.80BE/DE1-162[»]
4WR6X-ray3.0542/4E1-162[»]
4WRAX-ray3.0542/4E1-162[»]
4WROX-ray3.054E1-162[»]
4WSDX-ray2.9542/4E1-162[»]
4WSMX-ray3.3042/4E1-162[»]
4WT1X-ray3.0542/4E1-162[»]
4WT8X-ray3.40AE/BE5-154[»]
4WU1X-ray3.2042/4E1-162[»]
4WZDX-ray3.1042/4E1-162[»]
4WZOX-ray3.3042/4E1-162[»]
4X62X-ray3.45E5-155[»]
4X64X-ray3.35E5-155[»]
4X65X-ray3.35E5-155[»]
4X66X-ray3.45E5-155[»]
4Y4OX-ray2.301e/2e1-162[»]
4Y4PX-ray2.501e/2e1-162[»]
4YHHX-ray3.42E5-161[»]
4YPBX-ray3.40QE/XE1-162[»]
4YY3X-ray3.60E1-162[»]
4YZVX-ray3.10QE/XE1-162[»]
4Z3SX-ray2.651e/2e1-162[»]
4Z8CX-ray2.901e/2e1-162[»]
4ZERX-ray3.101e/2e5-152[»]
4ZSNX-ray3.60QE/XE1-162[»]
5A9Zelectron microscopy4.70BI5-154[»]
5AA0electron microscopy5.00BI5-154[»]
5BR8X-ray3.40E1-162[»]
5CZPX-ray3.30QE/XE1-162[»]
5D8BX-ray3.63BC/FA1-162[»]
5DFEX-ray3.10QE/XE1-162[»]
5DOXX-ray3.101e/2e1-162[»]
5DOYX-ray2.601e/2e1-162[»]
5E7KX-ray3.2042/4E1-162[»]
5E81X-ray2.9542/4E1-162[»]
5EL4X-ray3.1542/4E1-162[»]
5EL5X-ray3.1542/4E1-162[»]
5EL6X-ray3.1042/4E1-162[»]
5EL7X-ray3.1542/4E1-162[»]
5F8KX-ray2.801e/2e5-152[»]
5FDUX-ray2.901e/2e5-152[»]
5FDVX-ray2.801e/2e5-152[»]
5HAUX-ray3.001e/2e1-162[»]
5HCPX-ray2.891e/2e1-162[»]
5HCQX-ray2.801e/2e1-162[»]
5HCRX-ray2.801e/2e1-162[»]
5HD1X-ray2.701e/2e1-162[»]
5IB7X-ray2.9942/4E1-162[»]
5IB8X-ray3.1342/4E1-162[»]
5IBBX-ray2.9642/4E1-162[»]
5IMQelectron microscopy3.80I1-162[»]
5IMRelectron microscopy-I1-162[»]
5IWAX-ray3.50E5-161[»]
5J30X-ray3.20QE/XE1-162[»]
5J3CX-ray3.04QE/XE1-162[»]
5J4BX-ray2.601e/2e1-162[»]
5J4CX-ray2.801e/2e1-162[»]
5J8BX-ray2.60e1-162[»]
5LMNelectron microscopy3.55E1-162[»]
5LMOelectron microscopy4.30E1-162[»]
5LMPelectron microscopy5.35E1-162[»]
5LMQelectron microscopy4.20E1-162[»]
5LMRelectron microscopy4.45E1-162[»]
5LMSelectron microscopy5.10E1-162[»]
5LMTelectron microscopy4.15E1-162[»]
5LMUelectron microscopy4.00E1-162[»]
5LMVelectron microscopy4.90E1-162[»]
ProteinModelPortaliQ5SHQ5.
SMRiQ5SHQ5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA1675.

Proteomic databases

PRIDEiQ5SHQ5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD71498; BAD71498; BAD71498.
GeneIDi3169827.
KEGGittj:TTHA1675.
PATRICi23958305. VBITheThe93045_1645.

Phylogenomic databases

eggNOGiENOG4108RA9. Bacteria.
COG0098. LUCA.
HOGENOMiHOG000072595.
KOiK02988.
OMAiHKYNASK.
PhylomeDBiQ5SHQ5.

Miscellaneous databases

EvolutionaryTraceiQ5SHQ5.

Family and domain databases

Gene3Di3.30.160.20. 1 hit.
3.30.230.10. 1 hit.
HAMAPiMF_01307_B. Ribosomal_S5_B. 1 hit.
InterProiIPR014720. dsRBD_dom.
IPR000851. Ribosomal_S5.
IPR005712. Ribosomal_S5_bac-type.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
[Graphical view]
PANTHERiPTHR13718. PTHR13718. 1 hit.
PfamiPF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
TIGRFAMsiTIGR01021. rpsE_bact. 1 hit.
PROSITEiPS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS5_THET8
AccessioniPrimary (citable) accession number: Q5SHQ5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: January 23, 2007
Last modified: January 18, 2017
This is version 117 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Miscellaneous

Is positioned such that it could physically interact with spectinomycin.

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.