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Q5SHQ2

- RS8_THET8

UniProt

Q5SHQ2 - RS8_THET8

Protein

30S ribosomal protein S8

Gene

rpsH

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 91 (01 Oct 2014)
      Sequence version 1 (21 Dec 2004)
      Previous versions | rss
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    • Comment

    Functioni

    One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit central domain. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE300852:GH8R-1717-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S8
    Gene namesi
    Name:rpsH
    Ordered Locus Names:TTHA1678
    OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
    Taxonomic identifieri300852 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000532: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 13813830S ribosomal protein S8PRO_0000126511Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Contacts proteins S2, S5 and S12.

    Protein-protein interaction databases

    STRINGi300852.TTHA1678.

    Structurei

    Secondary structure

    1
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi5 – 1814
    Beta strandi22 – 276
    Helixi30 – 4112
    Beta strandi44 – 5310
    Beta strandi56 – 627
    Beta strandi70 – 723
    Beta strandi78 – 803
    Beta strandi81 – 855
    Beta strandi86 – 883
    Beta strandi89 – 913
    Beta strandi94 – 963
    Helixi97 – 993
    Helixi103 – 1064
    Beta strandi108 – 1147
    Beta strandi117 – 1204
    Helixi121 – 1266
    Beta strandi131 – 1388

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1EMIX-ray7.50A3-138[»]
    1FJGX-ray3.00H1-138[»]
    1FKAX-ray3.30H1-138[»]
    1GIXX-ray5.50K1-138[»]
    1HNWX-ray3.40H1-138[»]
    1HNXX-ray3.40H1-138[»]
    1HNZX-ray3.30H1-138[»]
    1HR0X-ray3.20H1-138[»]
    1I94X-ray3.20H1-138[»]
    1I95X-ray4.50H1-138[»]
    1I96X-ray4.20H1-138[»]
    1I97X-ray4.50H1-138[»]
    1IBKX-ray3.31H1-138[»]
    1IBLX-ray3.11H1-138[»]
    1IBMX-ray3.31H1-138[»]
    1J5EX-ray3.05H1-138[»]
    1JGOX-ray5.60K1-138[»]
    1JGPX-ray7.00K1-138[»]
    1JGQX-ray5.00K1-138[»]
    1L1Umodel-H1-138[»]
    1ML5electron microscopy14.00K1-138[»]
    1N32X-ray3.00H1-138[»]
    1N33X-ray3.35H1-138[»]
    1N34X-ray3.80H1-138[»]
    1N36X-ray3.65H1-138[»]
    1PNSX-ray8.70H1-138[»]
    1PNXX-ray9.50H1-138[»]
    1QD7X-ray5.50G3-138[»]
    1VOVX-ray11.50H1-138[»]
    1XMOX-ray3.25H1-138[»]
    1XMQX-ray3.00H1-138[»]
    1XNQX-ray3.05H1-138[»]
    1XNRX-ray3.10H1-138[»]
    1YL4X-ray5.50K1-138[»]
    2B64X-ray5.90H1-138[»]
    2B9MX-ray6.76H1-138[»]
    2B9OX-ray6.46H1-138[»]
    2E5LX-ray3.30H1-138[»]
    2F4VX-ray3.80H1-138[»]
    2HGIX-ray5.00K1-138[»]
    2HGPX-ray5.50K1-138[»]
    2HGRX-ray4.51K1-138[»]
    2HHHX-ray3.35H1-138[»]
    2J00X-ray2.80H1-138[»]
    2J02X-ray2.80H1-138[»]
    2OW8X-ray3.71i-[»]
    2UU9X-ray3.10H1-138[»]
    2UUAX-ray2.90H1-138[»]
    2UUBX-ray2.90H1-138[»]
    2UUCX-ray3.10H1-138[»]
    2UXBX-ray3.10H1-138[»]
    2UXCX-ray2.90H1-138[»]
    2UXDX-ray3.20H1-138[»]
    2V46X-ray3.80H1-138[»]
    2V48X-ray3.80H1-138[»]
    2VQEX-ray2.50H1-138[»]
    2VQFX-ray2.90H1-138[»]
    2WDGX-ray3.30H1-138[»]
    2WDHX-ray3.30H1-138[»]
    2WDKX-ray3.50H1-138[»]
    2WDMX-ray3.50H1-138[»]
    2WH1X-ray3.45H1-138[»]
    2WH3X-ray3.45H1-138[»]
    2WRIX-ray3.60H1-138[»]
    2WRKX-ray3.60H1-138[»]
    2WRNX-ray3.60H1-138[»]
    2WRQX-ray3.60H1-138[»]
    2X9RX-ray3.10H1-138[»]
    2X9TX-ray3.10H1-138[»]
    2XFZX-ray3.20H1-138[»]
    2XG1X-ray3.20H1-138[»]
    2XQDX-ray3.10H1-138[»]
    2XSYelectron microscopy7.80H1-138[»]
    2XUYelectron microscopy7.60H1-138[»]
    2Y0UX-ray3.10H1-138[»]
    2Y0WX-ray3.10H1-138[»]
    2Y0YX-ray3.10H1-138[»]
    2Y10X-ray3.10H1-138[»]
    2Y12X-ray3.10H1-138[»]
    2Y14X-ray3.10H1-138[»]
    2Y16X-ray3.10H1-138[»]
    2Y18X-ray3.10H1-138[»]
    2ZM6X-ray3.30H1-138[»]
    3FICelectron microscopy6.40H1-138[»]
    3HUWX-ray3.10H1-138[»]
    3HUYX-ray3.10H1-138[»]
    3I8GX-ray3.10K1-138[»]
    3I8HX-ray3.10K1-138[»]
    3I9BX-ray3.50K1-138[»]
    3I9DX-ray3.50K1-138[»]
    3KIQX-ray3.30h1-138[»]
    3KISX-ray3.30h1-138[»]
    3KIUX-ray3.60h1-138[»]
    3KIXX-ray3.60h1-138[»]
    3KNHX-ray3.00H1-138[»]
    3KNJX-ray3.15H1-138[»]
    3KNLX-ray3.45H1-138[»]
    3KNNX-ray3.45H1-138[»]
    3OGEX-ray3.00H1-138[»]
    3OGYX-ray3.00H1-138[»]
    3OHCX-ray3.00H1-138[»]
    3OHDX-ray3.00H1-138[»]
    3OHYX-ray3.00H1-138[»]
    3OI0X-ray3.00H1-138[»]
    3OI2X-ray3.10H1-138[»]
    3OI4X-ray3.10H1-138[»]
    3OTOX-ray3.69H1-138[»]
    3T1HX-ray3.11H1-138[»]
    3T1YX-ray2.80H1-138[»]
    3TVFX-ray3.10K1-138[»]
    3TVGX-ray3.10K1-138[»]
    3UXSX-ray3.20H1-138[»]
    3UXTX-ray3.20H1-138[»]
    3UYDX-ray3.00K1-138[»]
    3UYFX-ray3.00K1-138[»]
    3UZ3X-ray3.30K1-138[»]
    3UZ4X-ray3.30K1-138[»]
    3UZ6X-ray3.00K1-138[»]
    3UZ7X-ray3.00K1-138[»]
    3UZGX-ray3.30K1-138[»]
    3UZIX-ray3.30K1-138[»]
    3UZLX-ray3.30K1-138[»]
    3UZMX-ray3.30K1-138[»]
    3V22X-ray3.00H1-138[»]
    3V24X-ray3.00H1-138[»]
    3V26X-ray3.10H1-138[»]
    3V28X-ray3.10H1-138[»]
    3V2CX-ray2.70H1-138[»]
    3V2EX-ray2.70H1-138[»]
    3V6UX-ray3.90H1-138[»]
    3V6VX-ray3.90H1-138[»]
    3ZN7X-ray3.10H1-138[»]
    3ZNDX-ray3.10H1-138[»]
    3ZVOX-ray3.80H1-138[»]
    4ABRX-ray3.10H1-138[»]
    4AQYX-ray3.50H1-138[»]
    4B3MX-ray2.90H1-138[»]
    4B3RX-ray3.00H1-138[»]
    4B3SX-ray3.15H1-138[»]
    4B3TX-ray3.00H1-138[»]
    4B8FX-ray3.70H1-138[»]
    4B8HX-ray3.70H1-138[»]
    4BYDX-ray3.35H1-138[»]
    4CR1X-ray2.95H1-138[»]
    4DH9X-ray3.20H1-138[»]
    4DHBX-ray3.20H1-138[»]
    4DR1X-ray3.60H1-138[»]
    4DR2X-ray3.25H1-138[»]
    4DR3X-ray3.35H1-138[»]
    4DR4X-ray3.97H1-138[»]
    4DR5X-ray3.45H1-138[»]
    4DR6X-ray3.30H1-138[»]
    4DR7X-ray3.75H1-138[»]
    4DUYX-ray3.39H1-138[»]
    4DUZX-ray3.65H1-138[»]
    4DV0X-ray3.85H1-138[»]
    4DV1X-ray3.85H1-138[»]
    4DV2X-ray3.65H1-138[»]
    4DV3X-ray3.55H1-138[»]
    4DV4X-ray3.65H1-138[»]
    4DV5X-ray3.68H1-138[»]
    4DV6X-ray3.30H1-138[»]
    4DV7X-ray3.29H1-138[»]
    4EJ9X-ray3.52H1-138[»]
    4EJAX-ray3.52H1-138[»]
    4G5KX-ray3.30K1-138[»]
    4G5MX-ray3.30K1-138[»]
    4G5TX-ray3.10K1-138[»]
    4G5VX-ray3.10K1-138[»]
    4GKJX-ray3.30H1-138[»]
    4GKKX-ray3.20H1-138[»]
    4JI0X-ray3.49H1-138[»]
    4JI1X-ray3.14H1-138[»]
    4JI2X-ray3.64H1-138[»]
    4JI3X-ray3.35H1-138[»]
    4JI4X-ray3.69H1-138[»]
    4JI5X-ray3.85H1-138[»]
    4JI6X-ray3.55H1-138[»]
    4JI7X-ray3.50H1-138[»]
    4JI8X-ray3.74H1-138[»]
    4JUWX-ray2.86H1-138[»]
    4JV5X-ray3.16H1-138[»]
    4JYAX-ray3.10H1-138[»]
    4K0KX-ray3.40H1-138[»]
    4K0LX-ray3.30H1-138[»]
    4K0PX-ray3.30H1-138[»]
    4KHPX-ray3.10H1-138[»]
    4NVUX-ray3.00H1-138[»]
    4NVWX-ray3.00H1-138[»]
    4NVYX-ray3.10H1-138[»]
    4NW0X-ray3.10H1-138[»]
    4NXMX-ray3.65H1-138[»]
    4NXNX-ray3.54H1-138[»]
    4OX9X-ray3.80H1-138[»]
    ProteinModelPortaliQ5SHQ2.
    SMRiQ5SHQ2. Positions 1-138.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ5SHQ2.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S8P family.Curated

    Phylogenomic databases

    eggNOGiCOG0096.
    HOGENOMiHOG000204095.
    KOiK02994.
    OMAiTRVRNGQ.
    OrthoDBiEOG6Z0QH1.
    PhylomeDBiQ5SHQ2.

    Family and domain databases

    HAMAPiMF_01302_B. Ribosomal_S8_B.
    InterProiIPR000630. Ribosomal_S8.
    [Graphical view]
    PANTHERiPTHR11758. PTHR11758. 1 hit.
    PfamiPF00410. Ribosomal_S8. 1 hit.
    [Graphical view]
    SUPFAMiSSF56047. SSF56047. 1 hit.
    PROSITEiPS00053. RIBOSOMAL_S8. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5SHQ2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLTDPIADML TRIRNATRVY KESTDVPASR FKEEILRILA REGFIKGYER    50
    VDVDGKPYLR VYLKYGPRRQ GPDPRPEQVI HHIRRISKPG RRVYVGVKEI 100
    PRVRRGLGIA ILSTSKGVLT DREARKLGVG GELICEVW 138
    Length:138
    Mass (Da):15,838
    Last modified:December 21, 2004 - v1
    Checksum:i49CC858AD1E4DB5A
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti25 – 251D → E in CAA39898. (PubMed:2029902)Curated
    Sequence conflicti37 – 371R → K in CAA39898. (PubMed:2029902)Curated
    Sequence conflicti52 – 521D → E in CAA39898. (PubMed:2029902)Curated
    Sequence conflicti61 – 622VY → IH in CAA39898. (PubMed:2029902)Curated
    Sequence conflicti81 – 811H → K in CAA39898. (PubMed:2029902)Curated
    Sequence conflicti88 – 881K → R in CAA39898. (PubMed:2029902)Curated
    Sequence conflicti115 – 1151S → P in CAA39898. (PubMed:2029902)Curated

    Mass spectrometryi

    Molecular mass is 15839 Da from positions 1 - 138. Determined by MALDI. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X56552 Genomic DNA. Translation: CAA39898.1.
    AP008226 Genomic DNA. Translation: BAD71501.1.
    PIRiS15441.
    RefSeqiWP_011173705.1. NC_006461.1.
    YP_144944.1. NC_006461.1.

    Genome annotation databases

    EnsemblBacteriaiBAD71501; BAD71501; BAD71501.
    GeneIDi3169811.
    KEGGittj:TTHA1678.
    PATRICi23958311. VBITheThe93045_1648.

    Cross-referencesi

    Web resourcesi

    T.thermophilus ribosome structure and function

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X56552 Genomic DNA. Translation: CAA39898.1 .
    AP008226 Genomic DNA. Translation: BAD71501.1 .
    PIRi S15441.
    RefSeqi WP_011173705.1. NC_006461.1.
    YP_144944.1. NC_006461.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1EMI X-ray 7.50 A 3-138 [» ]
    1FJG X-ray 3.00 H 1-138 [» ]
    1FKA X-ray 3.30 H 1-138 [» ]
    1GIX X-ray 5.50 K 1-138 [» ]
    1HNW X-ray 3.40 H 1-138 [» ]
    1HNX X-ray 3.40 H 1-138 [» ]
    1HNZ X-ray 3.30 H 1-138 [» ]
    1HR0 X-ray 3.20 H 1-138 [» ]
    1I94 X-ray 3.20 H 1-138 [» ]
    1I95 X-ray 4.50 H 1-138 [» ]
    1I96 X-ray 4.20 H 1-138 [» ]
    1I97 X-ray 4.50 H 1-138 [» ]
    1IBK X-ray 3.31 H 1-138 [» ]
    1IBL X-ray 3.11 H 1-138 [» ]
    1IBM X-ray 3.31 H 1-138 [» ]
    1J5E X-ray 3.05 H 1-138 [» ]
    1JGO X-ray 5.60 K 1-138 [» ]
    1JGP X-ray 7.00 K 1-138 [» ]
    1JGQ X-ray 5.00 K 1-138 [» ]
    1L1U model - H 1-138 [» ]
    1ML5 electron microscopy 14.00 K 1-138 [» ]
    1N32 X-ray 3.00 H 1-138 [» ]
    1N33 X-ray 3.35 H 1-138 [» ]
    1N34 X-ray 3.80 H 1-138 [» ]
    1N36 X-ray 3.65 H 1-138 [» ]
    1PNS X-ray 8.70 H 1-138 [» ]
    1PNX X-ray 9.50 H 1-138 [» ]
    1QD7 X-ray 5.50 G 3-138 [» ]
    1VOV X-ray 11.50 H 1-138 [» ]
    1XMO X-ray 3.25 H 1-138 [» ]
    1XMQ X-ray 3.00 H 1-138 [» ]
    1XNQ X-ray 3.05 H 1-138 [» ]
    1XNR X-ray 3.10 H 1-138 [» ]
    1YL4 X-ray 5.50 K 1-138 [» ]
    2B64 X-ray 5.90 H 1-138 [» ]
    2B9M X-ray 6.76 H 1-138 [» ]
    2B9O X-ray 6.46 H 1-138 [» ]
    2E5L X-ray 3.30 H 1-138 [» ]
    2F4V X-ray 3.80 H 1-138 [» ]
    2HGI X-ray 5.00 K 1-138 [» ]
    2HGP X-ray 5.50 K 1-138 [» ]
    2HGR X-ray 4.51 K 1-138 [» ]
    2HHH X-ray 3.35 H 1-138 [» ]
    2J00 X-ray 2.80 H 1-138 [» ]
    2J02 X-ray 2.80 H 1-138 [» ]
    2OW8 X-ray 3.71 i - [» ]
    2UU9 X-ray 3.10 H 1-138 [» ]
    2UUA X-ray 2.90 H 1-138 [» ]
    2UUB X-ray 2.90 H 1-138 [» ]
    2UUC X-ray 3.10 H 1-138 [» ]
    2UXB X-ray 3.10 H 1-138 [» ]
    2UXC X-ray 2.90 H 1-138 [» ]
    2UXD X-ray 3.20 H 1-138 [» ]
    2V46 X-ray 3.80 H 1-138 [» ]
    2V48 X-ray 3.80 H 1-138 [» ]
    2VQE X-ray 2.50 H 1-138 [» ]
    2VQF X-ray 2.90 H 1-138 [» ]
    2WDG X-ray 3.30 H 1-138 [» ]
    2WDH X-ray 3.30 H 1-138 [» ]
    2WDK X-ray 3.50 H 1-138 [» ]
    2WDM X-ray 3.50 H 1-138 [» ]
    2WH1 X-ray 3.45 H 1-138 [» ]
    2WH3 X-ray 3.45 H 1-138 [» ]
    2WRI X-ray 3.60 H 1-138 [» ]
    2WRK X-ray 3.60 H 1-138 [» ]
    2WRN X-ray 3.60 H 1-138 [» ]
    2WRQ X-ray 3.60 H 1-138 [» ]
    2X9R X-ray 3.10 H 1-138 [» ]
    2X9T X-ray 3.10 H 1-138 [» ]
    2XFZ X-ray 3.20 H 1-138 [» ]
    2XG1 X-ray 3.20 H 1-138 [» ]
    2XQD X-ray 3.10 H 1-138 [» ]
    2XSY electron microscopy 7.80 H 1-138 [» ]
    2XUY electron microscopy 7.60 H 1-138 [» ]
    2Y0U X-ray 3.10 H 1-138 [» ]
    2Y0W X-ray 3.10 H 1-138 [» ]
    2Y0Y X-ray 3.10 H 1-138 [» ]
    2Y10 X-ray 3.10 H 1-138 [» ]
    2Y12 X-ray 3.10 H 1-138 [» ]
    2Y14 X-ray 3.10 H 1-138 [» ]
    2Y16 X-ray 3.10 H 1-138 [» ]
    2Y18 X-ray 3.10 H 1-138 [» ]
    2ZM6 X-ray 3.30 H 1-138 [» ]
    3FIC electron microscopy 6.40 H 1-138 [» ]
    3HUW X-ray 3.10 H 1-138 [» ]
    3HUY X-ray 3.10 H 1-138 [» ]
    3I8G X-ray 3.10 K 1-138 [» ]
    3I8H X-ray 3.10 K 1-138 [» ]
    3I9B X-ray 3.50 K 1-138 [» ]
    3I9D X-ray 3.50 K 1-138 [» ]
    3KIQ X-ray 3.30 h 1-138 [» ]
    3KIS X-ray 3.30 h 1-138 [» ]
    3KIU X-ray 3.60 h 1-138 [» ]
    3KIX X-ray 3.60 h 1-138 [» ]
    3KNH X-ray 3.00 H 1-138 [» ]
    3KNJ X-ray 3.15 H 1-138 [» ]
    3KNL X-ray 3.45 H 1-138 [» ]
    3KNN X-ray 3.45 H 1-138 [» ]
    3OGE X-ray 3.00 H 1-138 [» ]
    3OGY X-ray 3.00 H 1-138 [» ]
    3OHC X-ray 3.00 H 1-138 [» ]
    3OHD X-ray 3.00 H 1-138 [» ]
    3OHY X-ray 3.00 H 1-138 [» ]
    3OI0 X-ray 3.00 H 1-138 [» ]
    3OI2 X-ray 3.10 H 1-138 [» ]
    3OI4 X-ray 3.10 H 1-138 [» ]
    3OTO X-ray 3.69 H 1-138 [» ]
    3T1H X-ray 3.11 H 1-138 [» ]
    3T1Y X-ray 2.80 H 1-138 [» ]
    3TVF X-ray 3.10 K 1-138 [» ]
    3TVG X-ray 3.10 K 1-138 [» ]
    3UXS X-ray 3.20 H 1-138 [» ]
    3UXT X-ray 3.20 H 1-138 [» ]
    3UYD X-ray 3.00 K 1-138 [» ]
    3UYF X-ray 3.00 K 1-138 [» ]
    3UZ3 X-ray 3.30 K 1-138 [» ]
    3UZ4 X-ray 3.30 K 1-138 [» ]
    3UZ6 X-ray 3.00 K 1-138 [» ]
    3UZ7 X-ray 3.00 K 1-138 [» ]
    3UZG X-ray 3.30 K 1-138 [» ]
    3UZI X-ray 3.30 K 1-138 [» ]
    3UZL X-ray 3.30 K 1-138 [» ]
    3UZM X-ray 3.30 K 1-138 [» ]
    3V22 X-ray 3.00 H 1-138 [» ]
    3V24 X-ray 3.00 H 1-138 [» ]
    3V26 X-ray 3.10 H 1-138 [» ]
    3V28 X-ray 3.10 H 1-138 [» ]
    3V2C X-ray 2.70 H 1-138 [» ]
    3V2E X-ray 2.70 H 1-138 [» ]
    3V6U X-ray 3.90 H 1-138 [» ]
    3V6V X-ray 3.90 H 1-138 [» ]
    3ZN7 X-ray 3.10 H 1-138 [» ]
    3ZND X-ray 3.10 H 1-138 [» ]
    3ZVO X-ray 3.80 H 1-138 [» ]
    4ABR X-ray 3.10 H 1-138 [» ]
    4AQY X-ray 3.50 H 1-138 [» ]
    4B3M X-ray 2.90 H 1-138 [» ]
    4B3R X-ray 3.00 H 1-138 [» ]
    4B3S X-ray 3.15 H 1-138 [» ]
    4B3T X-ray 3.00 H 1-138 [» ]
    4B8F X-ray 3.70 H 1-138 [» ]
    4B8H X-ray 3.70 H 1-138 [» ]
    4BYD X-ray 3.35 H 1-138 [» ]
    4CR1 X-ray 2.95 H 1-138 [» ]
    4DH9 X-ray 3.20 H 1-138 [» ]
    4DHB X-ray 3.20 H 1-138 [» ]
    4DR1 X-ray 3.60 H 1-138 [» ]
    4DR2 X-ray 3.25 H 1-138 [» ]
    4DR3 X-ray 3.35 H 1-138 [» ]
    4DR4 X-ray 3.97 H 1-138 [» ]
    4DR5 X-ray 3.45 H 1-138 [» ]
    4DR6 X-ray 3.30 H 1-138 [» ]
    4DR7 X-ray 3.75 H 1-138 [» ]
    4DUY X-ray 3.39 H 1-138 [» ]
    4DUZ X-ray 3.65 H 1-138 [» ]
    4DV0 X-ray 3.85 H 1-138 [» ]
    4DV1 X-ray 3.85 H 1-138 [» ]
    4DV2 X-ray 3.65 H 1-138 [» ]
    4DV3 X-ray 3.55 H 1-138 [» ]
    4DV4 X-ray 3.65 H 1-138 [» ]
    4DV5 X-ray 3.68 H 1-138 [» ]
    4DV6 X-ray 3.30 H 1-138 [» ]
    4DV7 X-ray 3.29 H 1-138 [» ]
    4EJ9 X-ray 3.52 H 1-138 [» ]
    4EJA X-ray 3.52 H 1-138 [» ]
    4G5K X-ray 3.30 K 1-138 [» ]
    4G5M X-ray 3.30 K 1-138 [» ]
    4G5T X-ray 3.10 K 1-138 [» ]
    4G5V X-ray 3.10 K 1-138 [» ]
    4GKJ X-ray 3.30 H 1-138 [» ]
    4GKK X-ray 3.20 H 1-138 [» ]
    4JI0 X-ray 3.49 H 1-138 [» ]
    4JI1 X-ray 3.14 H 1-138 [» ]
    4JI2 X-ray 3.64 H 1-138 [» ]
    4JI3 X-ray 3.35 H 1-138 [» ]
    4JI4 X-ray 3.69 H 1-138 [» ]
    4JI5 X-ray 3.85 H 1-138 [» ]
    4JI6 X-ray 3.55 H 1-138 [» ]
    4JI7 X-ray 3.50 H 1-138 [» ]
    4JI8 X-ray 3.74 H 1-138 [» ]
    4JUW X-ray 2.86 H 1-138 [» ]
    4JV5 X-ray 3.16 H 1-138 [» ]
    4JYA X-ray 3.10 H 1-138 [» ]
    4K0K X-ray 3.40 H 1-138 [» ]
    4K0L X-ray 3.30 H 1-138 [» ]
    4K0P X-ray 3.30 H 1-138 [» ]
    4KHP X-ray 3.10 H 1-138 [» ]
    4NVU X-ray 3.00 H 1-138 [» ]
    4NVW X-ray 3.00 H 1-138 [» ]
    4NVY X-ray 3.10 H 1-138 [» ]
    4NW0 X-ray 3.10 H 1-138 [» ]
    4NXM X-ray 3.65 H 1-138 [» ]
    4NXN X-ray 3.54 H 1-138 [» ]
    4OX9 X-ray 3.80 H 1-138 [» ]
    ProteinModelPortali Q5SHQ2.
    SMRi Q5SHQ2. Positions 1-138.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 300852.TTHA1678.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD71501 ; BAD71501 ; BAD71501 .
    GeneIDi 3169811.
    KEGGi ttj:TTHA1678.
    PATRICi 23958311. VBITheThe93045_1648.

    Phylogenomic databases

    eggNOGi COG0096.
    HOGENOMi HOG000204095.
    KOi K02994.
    OMAi TRVRNGQ.
    OrthoDBi EOG6Z0QH1.
    PhylomeDBi Q5SHQ2.

    Enzyme and pathway databases

    BioCyci TTHE300852:GH8R-1717-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q5SHQ2.

    Family and domain databases

    HAMAPi MF_01302_B. Ribosomal_S8_B.
    InterProi IPR000630. Ribosomal_S8.
    [Graphical view ]
    PANTHERi PTHR11758. PTHR11758. 1 hit.
    Pfami PF00410. Ribosomal_S8. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56047. SSF56047. 1 hit.
    PROSITEi PS00053. RIBOSOMAL_S8. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the spc ribosomal protein operon of Thermus aquaticus."
      Jahn O., Hartmann R.K., Erdmann V.A.
      Eur. J. Biochem. 197:733-740(1991) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete genome sequence of Thermus thermophilus HB8."
      Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
      Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB8 / ATCC 27634 / DSM 579.
    3. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
      Tsiboli P., Herfurth E., Choli T.
      Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 1-28.
    4. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
      Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
      Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: MASS SPECTROMETRY.
    5. "Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution."
      Clemons W.M. Jr., May J.L.C., Wimberly B.T., McCutcheon J.P., Capel M.S., Ramakrishnan V.
      Nature 400:833-840(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE 30S SUBUNIT.
    6. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
    7. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
      Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
      Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    8. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    9. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
    10. "The location of protein S8 and surrounding elements of 16S rRNA in the 70S ribosome from combined use of directed hydroxyl radical probing and X-ray crystallography."
      Lancaster L., Culver G.M., Yusupova G.Z., Cate J.H.D., Yusupov M.M., Noller H.F.
      RNA 6:717-729(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (7.5 ANGSTROMS) OF THE RIBOSOME.
    11. "The path of messenger RNA through the ribosome."
      Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
      Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
    12. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
      Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
      EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    13. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
      Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    14. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
    15. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
      Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
      Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
    16. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
      J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.

    Entry informationi

    Entry nameiRS8_THET8
    AccessioniPrimary (citable) accession number: Q5SHQ2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 10, 2005
    Last sequence update: December 21, 2004
    Last modified: October 1, 2014
    This is version 91 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3