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Q5SHQ2

- RS8_THET8

UniProt

Q5SHQ2 - RS8_THET8

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Protein

30S ribosomal protein S8

Gene

rpsH

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit central domain. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-KW
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-1717-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8
Gene namesi
Name:rpsH
Ordered Locus Names:TTHA1678
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000532: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13813830S ribosomal protein S8PRO_0000126511Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S2, S5 and S12.

Protein-protein interaction databases

STRINGi300852.TTHA1678.

Structurei

Secondary structure

1
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi5 – 1814Combined sources
Beta strandi22 – 276Combined sources
Helixi30 – 4112Combined sources
Beta strandi44 – 5310Combined sources
Beta strandi56 – 627Combined sources
Beta strandi70 – 723Combined sources
Beta strandi78 – 803Combined sources
Beta strandi81 – 855Combined sources
Beta strandi86 – 883Combined sources
Beta strandi89 – 913Combined sources
Beta strandi94 – 963Combined sources
Helixi97 – 993Combined sources
Helixi103 – 1064Combined sources
Beta strandi108 – 1147Combined sources
Beta strandi117 – 1204Combined sources
Helixi121 – 1266Combined sources
Beta strandi131 – 1388Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1EMIX-ray7.50A3-138[»]
1FJGX-ray3.00H1-138[»]
1FKAX-ray3.30H1-138[»]
1GIXX-ray5.50K1-138[»]
1HNWX-ray3.40H1-138[»]
1HNXX-ray3.40H1-138[»]
1HNZX-ray3.30H1-138[»]
1HR0X-ray3.20H1-138[»]
1I94X-ray3.20H1-138[»]
1I95X-ray4.50H1-138[»]
1I96X-ray4.20H1-138[»]
1I97X-ray4.50H1-138[»]
1IBKX-ray3.31H1-138[»]
1IBLX-ray3.11H1-138[»]
1IBMX-ray3.31H1-138[»]
1J5EX-ray3.05H1-138[»]
1JGOX-ray5.60K1-138[»]
1JGPX-ray7.00K1-138[»]
1JGQX-ray5.00K1-138[»]
1L1Umodel-H1-138[»]
1ML5electron microscopy14.00K1-138[»]
1N32X-ray3.00H1-138[»]
1N33X-ray3.35H1-138[»]
1N34X-ray3.80H1-138[»]
1N36X-ray3.65H1-138[»]
1PNSX-ray8.70H1-138[»]
1PNXX-ray9.50H1-138[»]
1QD7X-ray5.50G3-138[»]
1VOVX-ray11.50H1-138[»]
1VVLX-ray3.22H1-138[»]
1VVNX-ray3.22H1-138[»]
1VVPX-ray3.90H1-138[»]
1VVRX-ray3.90H1-138[»]
1VVTX-ray3.90H1-138[»]
1VVVX-ray3.90H1-138[»]
1VVXX-ray3.92H1-138[»]
1VVZX-ray3.92H1-138[»]
1VX8X-ray2.94H1-138[»]
1VXIX-ray2.94H1-138[»]
1VXKX-ray3.48H1-138[»]
1VXMX-ray3.48H1-138[»]
1VXPX-ray3.14H1-138[»]
1VXSX-ray3.14H1-138[»]
1VY0X-ray3.68H1-138[»]
1VY2X-ray3.68H1-138[»]
1XMOX-ray3.25H1-138[»]
1XMQX-ray3.00H1-138[»]
1XNQX-ray3.05H1-138[»]
1XNRX-ray3.10H1-138[»]
1YL4X-ray5.50K1-138[»]
2B64X-ray5.90H1-138[»]
2B9MX-ray6.76H1-138[»]
2B9OX-ray6.46H1-138[»]
2E5LX-ray3.30H1-138[»]
2F4VX-ray3.80H1-138[»]
2HGIX-ray5.00K1-138[»]
2HGPX-ray5.50K1-138[»]
2HGRX-ray4.51K1-138[»]
2HHHX-ray3.35H1-138[»]
2J00X-ray2.80H1-138[»]
2J02X-ray2.80H1-138[»]
2OW8X-ray3.71i-[»]
2UU9X-ray3.10H1-138[»]
2UUAX-ray2.90H1-138[»]
2UUBX-ray2.90H1-138[»]
2UUCX-ray3.10H1-138[»]
2UXBX-ray3.10H1-138[»]
2UXCX-ray2.90H1-138[»]
2UXDX-ray3.20H1-138[»]
2V46X-ray3.80H1-138[»]
2V48X-ray3.80H1-138[»]
2VQEX-ray2.50H1-138[»]
2VQFX-ray2.90H1-138[»]
2WDGX-ray3.30H1-138[»]
2WDHX-ray3.30H1-138[»]
2WDKX-ray3.50H1-138[»]
2WDMX-ray3.50H1-138[»]
2WH1X-ray3.45H1-138[»]
2WH3X-ray3.45H1-138[»]
2WRIX-ray3.60H1-138[»]
2WRKX-ray3.60H1-138[»]
2WRNX-ray3.60H1-138[»]
2WRQX-ray3.60H1-138[»]
2X9RX-ray3.10H1-138[»]
2X9TX-ray3.10H1-138[»]
2XFZX-ray3.20H1-138[»]
2XG1X-ray3.20H1-138[»]
2XQDX-ray3.10H1-138[»]
2XSYelectron microscopy7.80H1-138[»]
2XUYelectron microscopy7.60H1-138[»]
2Y0UX-ray3.10H1-138[»]
2Y0WX-ray3.10H1-138[»]
2Y0YX-ray3.10H1-138[»]
2Y10X-ray3.10H1-138[»]
2Y12X-ray3.10H1-138[»]
2Y14X-ray3.10H1-138[»]
2Y16X-ray3.10H1-138[»]
2Y18X-ray3.10H1-138[»]
2ZM6X-ray3.30H1-138[»]
3FICelectron microscopy6.40H1-138[»]
3HUWX-ray3.10H1-138[»]
3HUYX-ray3.10H1-138[»]
3I8GX-ray3.10K1-138[»]
3I8HX-ray3.10K1-138[»]
3I9BX-ray3.50K1-138[»]
3I9DX-ray3.50K1-138[»]
3KIQX-ray3.30h1-138[»]
3KISX-ray3.30h1-138[»]
3KIUX-ray3.60h1-138[»]
3KIXX-ray3.60h1-138[»]
3KNHX-ray3.00H1-138[»]
3KNJX-ray3.15H1-138[»]
3KNLX-ray3.45H1-138[»]
3KNNX-ray3.45H1-138[»]
3OGEX-ray3.00H1-138[»]
3OGYX-ray3.00H1-138[»]
3OHCX-ray3.00H1-138[»]
3OHDX-ray3.00H1-138[»]
3OHYX-ray3.00H1-138[»]
3OI0X-ray3.00H1-138[»]
3OI2X-ray3.10H1-138[»]
3OI4X-ray3.10H1-138[»]
3OTOX-ray3.69H1-138[»]
3T1HX-ray3.11H1-138[»]
3T1YX-ray2.80H1-138[»]
3TVFX-ray3.10K1-138[»]
3TVGX-ray3.10K1-138[»]
3UXSX-ray3.20H1-138[»]
3UXTX-ray3.20H1-138[»]
3UYDX-ray3.00K1-138[»]
3UYFX-ray3.00K1-138[»]
3UZ3X-ray3.30K1-138[»]
3UZ4X-ray3.30K1-138[»]
3UZ6X-ray3.00K1-138[»]
3UZ7X-ray3.00K1-138[»]
3UZGX-ray3.30K1-138[»]
3UZIX-ray3.30K1-138[»]
3UZLX-ray3.30K1-138[»]
3UZMX-ray3.30K1-138[»]
3V22X-ray3.00H1-138[»]
3V24X-ray3.00H1-138[»]
3V26X-ray3.10H1-138[»]
3V28X-ray3.10H1-138[»]
3V2CX-ray2.70H1-138[»]
3V2EX-ray2.70H1-138[»]
3V6UX-ray3.90H1-138[»]
3V6VX-ray3.90H1-138[»]
3ZN7X-ray3.10H1-138[»]
3ZNDX-ray3.10H1-138[»]
3ZVOX-ray3.80H1-138[»]
4ABRX-ray3.10H1-138[»]
4AQYX-ray3.50H1-138[»]
4B3MX-ray2.90H1-138[»]
4B3RX-ray3.00H1-138[»]
4B3SX-ray3.15H1-138[»]
4B3TX-ray3.00H1-138[»]
4B8FX-ray3.70H1-138[»]
4B8HX-ray3.70H1-138[»]
4BYDX-ray3.35H1-138[»]
4CR1X-ray2.95H1-138[»]
4DH9X-ray3.20H1-138[»]
4DHBX-ray3.20H1-138[»]
4DR1X-ray3.60H1-138[»]
4DR2X-ray3.25H1-138[»]
4DR3X-ray3.35H1-138[»]
4DR4X-ray3.97H1-138[»]
4DR5X-ray3.45H1-138[»]
4DR6X-ray3.30H1-138[»]
4DR7X-ray3.75H1-138[»]
4DUYX-ray3.39H1-138[»]
4DUZX-ray3.65H1-138[»]
4DV0X-ray3.85H1-138[»]
4DV1X-ray3.85H1-138[»]
4DV2X-ray3.65H1-138[»]
4DV3X-ray3.55H1-138[»]
4DV4X-ray3.65H1-138[»]
4DV5X-ray3.68H1-138[»]
4DV6X-ray3.30H1-138[»]
4DV7X-ray3.29H1-138[»]
4EJ9X-ray3.52H1-138[»]
4EJAX-ray3.52H1-138[»]
4G5KX-ray3.30K1-138[»]
4G5MX-ray3.30K1-138[»]
4G5TX-ray3.10K1-138[»]
4G5VX-ray3.10K1-138[»]
4GKJX-ray3.30H1-138[»]
4GKKX-ray3.20H1-138[»]
4JI0X-ray3.49H1-138[»]
4JI1X-ray3.14H1-138[»]
4JI2X-ray3.64H1-138[»]
4JI3X-ray3.35H1-138[»]
4JI4X-ray3.69H1-138[»]
4JI5X-ray3.85H1-138[»]
4JI6X-ray3.55H1-138[»]
4JI7X-ray3.50H1-138[»]
4JI8X-ray3.74H1-138[»]
4JUWX-ray2.86H1-138[»]
4JV5X-ray3.16H1-138[»]
4JYAX-ray3.10H1-138[»]
4K0KX-ray3.40H1-138[»]
4K0LX-ray3.30H1-138[»]
4K0PX-ray3.30H1-138[»]
4KHPX-ray3.10H1-138[»]
4KWZX-ray3.44H1-138[»]
4KX1X-ray3.44H1-138[»]
4LF4X-ray3.34H1-138[»]
4LF5X-ray3.75H1-138[»]
4LF6X-ray3.31H1-138[»]
4LF7X-ray3.15H1-138[»]
4LF8X-ray3.15H1-138[»]
4LF9X-ray3.28H1-138[»]
4LFAX-ray3.65H1-138[»]
4LFBX-ray3.01H1-138[»]
4LFCX-ray3.60H1-138[»]
4NVUX-ray3.00H1-138[»]
4NVWX-ray3.00H1-138[»]
4NVYX-ray3.10H1-138[»]
4NW0X-ray3.10H1-138[»]
4NXMX-ray3.65H1-138[»]
4NXNX-ray3.54H1-138[»]
4OX9X-ray3.80H1-138[»]
4QCMX-ray2.60H1-138[»]
4QCOX-ray2.60H1-138[»]
4QCQX-ray2.55H1-138[»]
4QCSX-ray2.55H1-138[»]
4QCUX-ray2.90H1-138[»]
4QCWX-ray2.90H1-138[»]
4QCYX-ray2.80H1-138[»]
4QD0X-ray2.80H1-138[»]
4QJTX-ray2.90h1-138[»]
4W2AX-ray3.60I1-138[»]
4W2CX-ray3.60I1-138[»]
ProteinModelPortaliQ5SHQ2.
SMRiQ5SHQ2. Positions 1-138.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SHQ2.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8P family.Curated

Phylogenomic databases

eggNOGiCOG0096.
HOGENOMiHOG000204095.
KOiK02994.
OMAiTRVRNGQ.
OrthoDBiEOG6Z0QH1.
PhylomeDBiQ5SHQ2.

Family and domain databases

HAMAPiMF_01302_B. Ribosomal_S8_B.
InterProiIPR000630. Ribosomal_S8.
[Graphical view]
PANTHERiPTHR11758. PTHR11758. 1 hit.
PfamiPF00410. Ribosomal_S8. 1 hit.
[Graphical view]
SUPFAMiSSF56047. SSF56047. 1 hit.
PROSITEiPS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5SHQ2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLTDPIADML TRIRNATRVY KESTDVPASR FKEEILRILA REGFIKGYER
60 70 80 90 100
VDVDGKPYLR VYLKYGPRRQ GPDPRPEQVI HHIRRISKPG RRVYVGVKEI
110 120 130
PRVRRGLGIA ILSTSKGVLT DREARKLGVG GELICEVW
Length:138
Mass (Da):15,838
Last modified:December 21, 2004 - v1
Checksum:i49CC858AD1E4DB5A
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti25 – 251D → E in CAA39898. (PubMed:2029902)Curated
Sequence conflicti37 – 371R → K in CAA39898. (PubMed:2029902)Curated
Sequence conflicti52 – 521D → E in CAA39898. (PubMed:2029902)Curated
Sequence conflicti61 – 622VY → IH in CAA39898. (PubMed:2029902)Curated
Sequence conflicti81 – 811H → K in CAA39898. (PubMed:2029902)Curated
Sequence conflicti88 – 881K → R in CAA39898. (PubMed:2029902)Curated
Sequence conflicti115 – 1151S → P in CAA39898. (PubMed:2029902)Curated

Mass spectrometryi

Molecular mass is 15839 Da from positions 1 - 138. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X56552 Genomic DNA. Translation: CAA39898.1.
AP008226 Genomic DNA. Translation: BAD71501.1.
PIRiS15441.
RefSeqiWP_011173705.1. NC_006461.1.
YP_144944.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD71501; BAD71501; BAD71501.
GeneIDi3169811.
KEGGittj:TTHA1678.
PATRICi23958311. VBITheThe93045_1648.

Cross-referencesi

Web resourcesi

T.thermophilus ribosome structure and function

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X56552 Genomic DNA. Translation: CAA39898.1 .
AP008226 Genomic DNA. Translation: BAD71501.1 .
PIRi S15441.
RefSeqi WP_011173705.1. NC_006461.1.
YP_144944.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1EMI X-ray 7.50 A 3-138 [» ]
1FJG X-ray 3.00 H 1-138 [» ]
1FKA X-ray 3.30 H 1-138 [» ]
1GIX X-ray 5.50 K 1-138 [» ]
1HNW X-ray 3.40 H 1-138 [» ]
1HNX X-ray 3.40 H 1-138 [» ]
1HNZ X-ray 3.30 H 1-138 [» ]
1HR0 X-ray 3.20 H 1-138 [» ]
1I94 X-ray 3.20 H 1-138 [» ]
1I95 X-ray 4.50 H 1-138 [» ]
1I96 X-ray 4.20 H 1-138 [» ]
1I97 X-ray 4.50 H 1-138 [» ]
1IBK X-ray 3.31 H 1-138 [» ]
1IBL X-ray 3.11 H 1-138 [» ]
1IBM X-ray 3.31 H 1-138 [» ]
1J5E X-ray 3.05 H 1-138 [» ]
1JGO X-ray 5.60 K 1-138 [» ]
1JGP X-ray 7.00 K 1-138 [» ]
1JGQ X-ray 5.00 K 1-138 [» ]
1L1U model - H 1-138 [» ]
1ML5 electron microscopy 14.00 K 1-138 [» ]
1N32 X-ray 3.00 H 1-138 [» ]
1N33 X-ray 3.35 H 1-138 [» ]
1N34 X-ray 3.80 H 1-138 [» ]
1N36 X-ray 3.65 H 1-138 [» ]
1PNS X-ray 8.70 H 1-138 [» ]
1PNX X-ray 9.50 H 1-138 [» ]
1QD7 X-ray 5.50 G 3-138 [» ]
1VOV X-ray 11.50 H 1-138 [» ]
1VVL X-ray 3.22 H 1-138 [» ]
1VVN X-ray 3.22 H 1-138 [» ]
1VVP X-ray 3.90 H 1-138 [» ]
1VVR X-ray 3.90 H 1-138 [» ]
1VVT X-ray 3.90 H 1-138 [» ]
1VVV X-ray 3.90 H 1-138 [» ]
1VVX X-ray 3.92 H 1-138 [» ]
1VVZ X-ray 3.92 H 1-138 [» ]
1VX8 X-ray 2.94 H 1-138 [» ]
1VXI X-ray 2.94 H 1-138 [» ]
1VXK X-ray 3.48 H 1-138 [» ]
1VXM X-ray 3.48 H 1-138 [» ]
1VXP X-ray 3.14 H 1-138 [» ]
1VXS X-ray 3.14 H 1-138 [» ]
1VY0 X-ray 3.68 H 1-138 [» ]
1VY2 X-ray 3.68 H 1-138 [» ]
1XMO X-ray 3.25 H 1-138 [» ]
1XMQ X-ray 3.00 H 1-138 [» ]
1XNQ X-ray 3.05 H 1-138 [» ]
1XNR X-ray 3.10 H 1-138 [» ]
1YL4 X-ray 5.50 K 1-138 [» ]
2B64 X-ray 5.90 H 1-138 [» ]
2B9M X-ray 6.76 H 1-138 [» ]
2B9O X-ray 6.46 H 1-138 [» ]
2E5L X-ray 3.30 H 1-138 [» ]
2F4V X-ray 3.80 H 1-138 [» ]
2HGI X-ray 5.00 K 1-138 [» ]
2HGP X-ray 5.50 K 1-138 [» ]
2HGR X-ray 4.51 K 1-138 [» ]
2HHH X-ray 3.35 H 1-138 [» ]
2J00 X-ray 2.80 H 1-138 [» ]
2J02 X-ray 2.80 H 1-138 [» ]
2OW8 X-ray 3.71 i - [» ]
2UU9 X-ray 3.10 H 1-138 [» ]
2UUA X-ray 2.90 H 1-138 [» ]
2UUB X-ray 2.90 H 1-138 [» ]
2UUC X-ray 3.10 H 1-138 [» ]
2UXB X-ray 3.10 H 1-138 [» ]
2UXC X-ray 2.90 H 1-138 [» ]
2UXD X-ray 3.20 H 1-138 [» ]
2V46 X-ray 3.80 H 1-138 [» ]
2V48 X-ray 3.80 H 1-138 [» ]
2VQE X-ray 2.50 H 1-138 [» ]
2VQF X-ray 2.90 H 1-138 [» ]
2WDG X-ray 3.30 H 1-138 [» ]
2WDH X-ray 3.30 H 1-138 [» ]
2WDK X-ray 3.50 H 1-138 [» ]
2WDM X-ray 3.50 H 1-138 [» ]
2WH1 X-ray 3.45 H 1-138 [» ]
2WH3 X-ray 3.45 H 1-138 [» ]
2WRI X-ray 3.60 H 1-138 [» ]
2WRK X-ray 3.60 H 1-138 [» ]
2WRN X-ray 3.60 H 1-138 [» ]
2WRQ X-ray 3.60 H 1-138 [» ]
2X9R X-ray 3.10 H 1-138 [» ]
2X9T X-ray 3.10 H 1-138 [» ]
2XFZ X-ray 3.20 H 1-138 [» ]
2XG1 X-ray 3.20 H 1-138 [» ]
2XQD X-ray 3.10 H 1-138 [» ]
2XSY electron microscopy 7.80 H 1-138 [» ]
2XUY electron microscopy 7.60 H 1-138 [» ]
2Y0U X-ray 3.10 H 1-138 [» ]
2Y0W X-ray 3.10 H 1-138 [» ]
2Y0Y X-ray 3.10 H 1-138 [» ]
2Y10 X-ray 3.10 H 1-138 [» ]
2Y12 X-ray 3.10 H 1-138 [» ]
2Y14 X-ray 3.10 H 1-138 [» ]
2Y16 X-ray 3.10 H 1-138 [» ]
2Y18 X-ray 3.10 H 1-138 [» ]
2ZM6 X-ray 3.30 H 1-138 [» ]
3FIC electron microscopy 6.40 H 1-138 [» ]
3HUW X-ray 3.10 H 1-138 [» ]
3HUY X-ray 3.10 H 1-138 [» ]
3I8G X-ray 3.10 K 1-138 [» ]
3I8H X-ray 3.10 K 1-138 [» ]
3I9B X-ray 3.50 K 1-138 [» ]
3I9D X-ray 3.50 K 1-138 [» ]
3KIQ X-ray 3.30 h 1-138 [» ]
3KIS X-ray 3.30 h 1-138 [» ]
3KIU X-ray 3.60 h 1-138 [» ]
3KIX X-ray 3.60 h 1-138 [» ]
3KNH X-ray 3.00 H 1-138 [» ]
3KNJ X-ray 3.15 H 1-138 [» ]
3KNL X-ray 3.45 H 1-138 [» ]
3KNN X-ray 3.45 H 1-138 [» ]
3OGE X-ray 3.00 H 1-138 [» ]
3OGY X-ray 3.00 H 1-138 [» ]
3OHC X-ray 3.00 H 1-138 [» ]
3OHD X-ray 3.00 H 1-138 [» ]
3OHY X-ray 3.00 H 1-138 [» ]
3OI0 X-ray 3.00 H 1-138 [» ]
3OI2 X-ray 3.10 H 1-138 [» ]
3OI4 X-ray 3.10 H 1-138 [» ]
3OTO X-ray 3.69 H 1-138 [» ]
3T1H X-ray 3.11 H 1-138 [» ]
3T1Y X-ray 2.80 H 1-138 [» ]
3TVF X-ray 3.10 K 1-138 [» ]
3TVG X-ray 3.10 K 1-138 [» ]
3UXS X-ray 3.20 H 1-138 [» ]
3UXT X-ray 3.20 H 1-138 [» ]
3UYD X-ray 3.00 K 1-138 [» ]
3UYF X-ray 3.00 K 1-138 [» ]
3UZ3 X-ray 3.30 K 1-138 [» ]
3UZ4 X-ray 3.30 K 1-138 [» ]
3UZ6 X-ray 3.00 K 1-138 [» ]
3UZ7 X-ray 3.00 K 1-138 [» ]
3UZG X-ray 3.30 K 1-138 [» ]
3UZI X-ray 3.30 K 1-138 [» ]
3UZL X-ray 3.30 K 1-138 [» ]
3UZM X-ray 3.30 K 1-138 [» ]
3V22 X-ray 3.00 H 1-138 [» ]
3V24 X-ray 3.00 H 1-138 [» ]
3V26 X-ray 3.10 H 1-138 [» ]
3V28 X-ray 3.10 H 1-138 [» ]
3V2C X-ray 2.70 H 1-138 [» ]
3V2E X-ray 2.70 H 1-138 [» ]
3V6U X-ray 3.90 H 1-138 [» ]
3V6V X-ray 3.90 H 1-138 [» ]
3ZN7 X-ray 3.10 H 1-138 [» ]
3ZND X-ray 3.10 H 1-138 [» ]
3ZVO X-ray 3.80 H 1-138 [» ]
4ABR X-ray 3.10 H 1-138 [» ]
4AQY X-ray 3.50 H 1-138 [» ]
4B3M X-ray 2.90 H 1-138 [» ]
4B3R X-ray 3.00 H 1-138 [» ]
4B3S X-ray 3.15 H 1-138 [» ]
4B3T X-ray 3.00 H 1-138 [» ]
4B8F X-ray 3.70 H 1-138 [» ]
4B8H X-ray 3.70 H 1-138 [» ]
4BYD X-ray 3.35 H 1-138 [» ]
4CR1 X-ray 2.95 H 1-138 [» ]
4DH9 X-ray 3.20 H 1-138 [» ]
4DHB X-ray 3.20 H 1-138 [» ]
4DR1 X-ray 3.60 H 1-138 [» ]
4DR2 X-ray 3.25 H 1-138 [» ]
4DR3 X-ray 3.35 H 1-138 [» ]
4DR4 X-ray 3.97 H 1-138 [» ]
4DR5 X-ray 3.45 H 1-138 [» ]
4DR6 X-ray 3.30 H 1-138 [» ]
4DR7 X-ray 3.75 H 1-138 [» ]
4DUY X-ray 3.39 H 1-138 [» ]
4DUZ X-ray 3.65 H 1-138 [» ]
4DV0 X-ray 3.85 H 1-138 [» ]
4DV1 X-ray 3.85 H 1-138 [» ]
4DV2 X-ray 3.65 H 1-138 [» ]
4DV3 X-ray 3.55 H 1-138 [» ]
4DV4 X-ray 3.65 H 1-138 [» ]
4DV5 X-ray 3.68 H 1-138 [» ]
4DV6 X-ray 3.30 H 1-138 [» ]
4DV7 X-ray 3.29 H 1-138 [» ]
4EJ9 X-ray 3.52 H 1-138 [» ]
4EJA X-ray 3.52 H 1-138 [» ]
4G5K X-ray 3.30 K 1-138 [» ]
4G5M X-ray 3.30 K 1-138 [» ]
4G5T X-ray 3.10 K 1-138 [» ]
4G5V X-ray 3.10 K 1-138 [» ]
4GKJ X-ray 3.30 H 1-138 [» ]
4GKK X-ray 3.20 H 1-138 [» ]
4JI0 X-ray 3.49 H 1-138 [» ]
4JI1 X-ray 3.14 H 1-138 [» ]
4JI2 X-ray 3.64 H 1-138 [» ]
4JI3 X-ray 3.35 H 1-138 [» ]
4JI4 X-ray 3.69 H 1-138 [» ]
4JI5 X-ray 3.85 H 1-138 [» ]
4JI6 X-ray 3.55 H 1-138 [» ]
4JI7 X-ray 3.50 H 1-138 [» ]
4JI8 X-ray 3.74 H 1-138 [» ]
4JUW X-ray 2.86 H 1-138 [» ]
4JV5 X-ray 3.16 H 1-138 [» ]
4JYA X-ray 3.10 H 1-138 [» ]
4K0K X-ray 3.40 H 1-138 [» ]
4K0L X-ray 3.30 H 1-138 [» ]
4K0P X-ray 3.30 H 1-138 [» ]
4KHP X-ray 3.10 H 1-138 [» ]
4KWZ X-ray 3.44 H 1-138 [» ]
4KX1 X-ray 3.44 H 1-138 [» ]
4LF4 X-ray 3.34 H 1-138 [» ]
4LF5 X-ray 3.75 H 1-138 [» ]
4LF6 X-ray 3.31 H 1-138 [» ]
4LF7 X-ray 3.15 H 1-138 [» ]
4LF8 X-ray 3.15 H 1-138 [» ]
4LF9 X-ray 3.28 H 1-138 [» ]
4LFA X-ray 3.65 H 1-138 [» ]
4LFB X-ray 3.01 H 1-138 [» ]
4LFC X-ray 3.60 H 1-138 [» ]
4NVU X-ray 3.00 H 1-138 [» ]
4NVW X-ray 3.00 H 1-138 [» ]
4NVY X-ray 3.10 H 1-138 [» ]
4NW0 X-ray 3.10 H 1-138 [» ]
4NXM X-ray 3.65 H 1-138 [» ]
4NXN X-ray 3.54 H 1-138 [» ]
4OX9 X-ray 3.80 H 1-138 [» ]
4QCM X-ray 2.60 H 1-138 [» ]
4QCO X-ray 2.60 H 1-138 [» ]
4QCQ X-ray 2.55 H 1-138 [» ]
4QCS X-ray 2.55 H 1-138 [» ]
4QCU X-ray 2.90 H 1-138 [» ]
4QCW X-ray 2.90 H 1-138 [» ]
4QCY X-ray 2.80 H 1-138 [» ]
4QD0 X-ray 2.80 H 1-138 [» ]
4QJT X-ray 2.90 h 1-138 [» ]
4W2A X-ray 3.60 I 1-138 [» ]
4W2C X-ray 3.60 I 1-138 [» ]
ProteinModelPortali Q5SHQ2.
SMRi Q5SHQ2. Positions 1-138.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 300852.TTHA1678.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAD71501 ; BAD71501 ; BAD71501 .
GeneIDi 3169811.
KEGGi ttj:TTHA1678.
PATRICi 23958311. VBITheThe93045_1648.

Phylogenomic databases

eggNOGi COG0096.
HOGENOMi HOG000204095.
KOi K02994.
OMAi TRVRNGQ.
OrthoDBi EOG6Z0QH1.
PhylomeDBi Q5SHQ2.

Enzyme and pathway databases

BioCyci TTHE300852:GH8R-1717-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q5SHQ2.

Family and domain databases

HAMAPi MF_01302_B. Ribosomal_S8_B.
InterProi IPR000630. Ribosomal_S8.
[Graphical view ]
PANTHERi PTHR11758. PTHR11758. 1 hit.
Pfami PF00410. Ribosomal_S8. 1 hit.
[Graphical view ]
SUPFAMi SSF56047. SSF56047. 1 hit.
PROSITEi PS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the spc ribosomal protein operon of Thermus aquaticus."
    Jahn O., Hartmann R.K., Erdmann V.A.
    Eur. J. Biochem. 197:733-740(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Complete genome sequence of Thermus thermophilus HB8."
    Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB8 / ATCC 27634 / DSM 579.
  3. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
    Tsiboli P., Herfurth E., Choli T.
    Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 1-28.
  4. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
    Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
    Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: MASS SPECTROMETRY.
  5. "Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution."
    Clemons W.M. Jr., May J.L.C., Wimberly B.T., McCutcheon J.P., Capel M.S., Ramakrishnan V.
    Nature 400:833-840(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE 30S SUBUNIT.
  6. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
  7. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
    Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
    Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  8. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  9. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
  10. "The location of protein S8 and surrounding elements of 16S rRNA in the 70S ribosome from combined use of directed hydroxyl radical probing and X-ray crystallography."
    Lancaster L., Culver G.M., Yusupova G.Z., Cate J.H.D., Yusupov M.M., Noller H.F.
    RNA 6:717-729(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (7.5 ANGSTROMS) OF THE RIBOSOME.
  11. "The path of messenger RNA through the ribosome."
    Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
    Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
  12. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
    Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
    EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  13. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
    Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  14. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
  15. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
    Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
    Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
  16. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
    J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.

Entry informationi

Entry nameiRS8_THET8
AccessioniPrimary (citable) accession number: Q5SHQ2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: December 21, 2004
Last modified: November 26, 2014
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3