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Protein

30S ribosomal protein S14 type Z

Gene

rpsZ

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (By similarity). Binds 16S rRNA in center of the 30S subunit head.By similarity

Cofactori

Zn2+1 PublicationNote: Binds 1 zinc ion per subunit.1 Publication

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi24 – 241Zinc
Metal bindingi27 – 271Zinc
Metal bindingi40 – 401Zinc
Metal bindingi43 – 431Zinc

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
  3. zinc ion binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

Metal-binding, RNA-binding, rRNA-binding, Zinc

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-1718-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S14 type Z
Gene namesi
Name:rpsZ
Synonyms:rpsN
Ordered Locus Names:TTHA1679
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000532: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed2 Publications
Chaini2 – 616030S ribosomal protein S14 type ZPRO_0000130955Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight complex with proteins S3 and S10, which cover it.

Protein-protein interaction databases

STRINGi300852.TTHA1679.

Structurei

Secondary structure

1
61
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi4 – 118Combined sources
Helixi17 – 193Combined sources
Turni25 – 273Combined sources
Beta strandi30 – 334Combined sources
Turni35 – 373Combined sources
Beta strandi38 – 403Combined sources
Helixi41 – 499Combined sources
Beta strandi53 – 553Combined sources
Beta strandi56 – 583Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00N1-61[»]
1HNWX-ray3.40N1-61[»]
1HNXX-ray3.40N1-61[»]
1HNZX-ray3.30N1-61[»]
1HR0X-ray3.20N1-61[»]
1I94X-ray3.20N2-61[»]
1I95X-ray4.50N2-61[»]
1I96X-ray4.20N2-61[»]
1I97X-ray4.50N2-61[»]
1IBKX-ray3.31N1-61[»]
1IBLX-ray3.11N1-61[»]
1IBMX-ray3.31N1-61[»]
1J5EX-ray3.05N2-61[»]
1JGOX-ray5.60Q1-61[»]
1JGPX-ray7.00Q1-61[»]
1JGQX-ray5.00Q1-61[»]
1L1Umodel-N1-61[»]
1ML5electron microscopy14.00Q1-61[»]
1N32X-ray3.00N2-61[»]
1N33X-ray3.35N2-61[»]
1N34X-ray3.80N2-61[»]
1N36X-ray3.65N2-61[»]
1VVJX-ray3.44N1-61[»]
1VY4X-ray2.60N1-61[»]
1VY5X-ray2.55N1-61[»]
1VY6X-ray2.90N1-61[»]
1VY7X-ray2.80N1-61[»]
1XMOX-ray3.25N1-61[»]
1XMQX-ray3.00N1-61[»]
1XNQX-ray3.05N1-61[»]
1XNRX-ray3.10N1-61[»]
2E5LX-ray3.30N2-61[»]
2F4VX-ray3.80N1-61[»]
2HHHX-ray3.35N1-61[»]
2J00X-ray2.80N1-61[»]
2J02X-ray2.80N2-61[»]
2UU9X-ray3.10N2-61[»]
2UUAX-ray2.90N2-61[»]
2UUBX-ray2.80N2-61[»]
2UUCX-ray3.10N2-61[»]
2UXBX-ray3.10N2-61[»]
2UXCX-ray2.90N2-61[»]
2UXDX-ray3.20N2-61[»]
2V46X-ray3.50N2-61[»]
2V48X-ray3.50N2-61[»]
2VQEX-ray2.50N1-61[»]
2VQFX-ray2.90N1-61[»]
2WDGX-ray3.30N1-61[»]
2WDHX-ray3.30N1-61[»]
2WDKX-ray3.50N1-61[»]
2WDMX-ray3.50N1-61[»]
2WH1X-ray3.45N1-61[»]
2WH3X-ray3.45N1-61[»]
2ZM6X-ray3.30N2-61[»]
3OTOX-ray3.69N1-61[»]
3T1HX-ray3.11N1-61[»]
3T1YX-ray2.80N1-61[»]
4AQYX-ray3.50N2-61[»]
4B3MX-ray2.90N2-61[»]
4B3RX-ray3.00N2-61[»]
4B3SX-ray3.15N2-61[»]
4B3TX-ray3.00N2-61[»]
4DR1X-ray3.60N1-61[»]
4DR2X-ray3.25N1-61[»]
4DR3X-ray3.35N1-61[»]
4DR4X-ray3.97N1-61[»]
4DR5X-ray3.45N1-61[»]
4DR6X-ray3.30N1-61[»]
4DR7X-ray3.75N1-61[»]
4DUYX-ray3.39N1-61[»]
4DUZX-ray3.65N1-61[»]
4DV0X-ray3.85N1-61[»]
4DV1X-ray3.85N1-61[»]
4DV2X-ray3.65N1-61[»]
4DV3X-ray3.55N1-61[»]
4DV4X-ray3.65N1-61[»]
4DV5X-ray3.68N1-61[»]
4DV6X-ray3.30N1-61[»]
4DV7X-ray3.29N1-61[»]
4GKJX-ray3.30N2-61[»]
4GKKX-ray3.20N2-61[»]
4JI0X-ray3.49N1-61[»]
4JI1X-ray3.14N1-61[»]
4JI2X-ray3.64N1-61[»]
4JI3X-ray3.35N1-61[»]
4JI4X-ray3.69N1-61[»]
4JI5X-ray3.85N1-61[»]
4JI6X-ray3.55N1-61[»]
4JI7X-ray3.50N1-61[»]
4JI8X-ray3.74N1-61[»]
4JV5X-ray3.16N2-61[»]
4JYAX-ray3.10N2-61[»]
4K0KX-ray3.40N2-61[»]
4KHPX-ray3.10N2-61[»]
4L47X-ray3.22N1-61[»]
4L71X-ray3.90N1-61[»]
4LELX-ray3.90N1-61[»]
4LF4X-ray3.34N1-61[»]
4LF5X-ray3.75N1-61[»]
4LF6X-ray3.31N1-61[»]
4LF7X-ray3.15N1-61[»]
4LF8X-ray3.15N1-61[»]
4LF9X-ray3.28N1-61[»]
4LFAX-ray3.65N1-61[»]
4LFBX-ray3.01N1-61[»]
4LFCX-ray3.60N1-61[»]
4LFZX-ray3.92N1-61[»]
4LNTX-ray2.94N1-61[»]
4LSKX-ray3.48N1-61[»]
4LT8X-ray3.14N1-61[»]
4NXMX-ray3.65N1-61[»]
4NXNX-ray3.54N1-61[»]
4OX9X-ray3.80N2-61[»]
4P6FX-ray3.60O1-61[»]
4P70X-ray3.68N1-61[»]
4RB7X-ray2.40N1-61[»]
4V42X-ray5.50Q1-61[»]
4V49X-ray8.70N2-61[»]
4V4AX-ray9.50N2-61[»]
4V4IX-ray3.71o-[»]
4V4PX-ray5.50Q1-61[»]
4V4RX-ray5.90N1-61[»]
4V4SX-ray6.76N1-61[»]
4V4TX-ray6.46N1-61[»]
4V4XX-ray5.00Q1-61[»]
4V4YX-ray5.50Q1-61[»]
4V4ZX-ray4.51Q1-61[»]
4V5FX-ray3.60N1-61[»]
4V5GX-ray3.60N1-61[»]
4V5JX-ray3.10N1-61[»]
4V5KX-ray3.20N1-61[»]
4V5LX-ray3.10N1-61[»]
4V5Melectron microscopy7.80N1-61[»]
4V5Nelectron microscopy7.60N1-61[»]
4V5PX-ray3.10N1-61[»]
4V5QX-ray3.10N1-61[»]
4V5RX-ray3.10N1-61[»]
4V5SX-ray3.10N1-61[»]
4V68electron microscopy6.40N2-61[»]
4V6AX-ray3.10N1-61[»]
4V6FX-ray3.10Q1-61[»]
4V6GX-ray3.50Q1-61[»]
4V7JX-ray3.30n1-61[»]
4V7KX-ray3.60n1-61[»]
4V7LX-ray3.15N1-61[»]
4V7MX-ray3.45N1-61[»]
4V7WX-ray3.00N1-61[»]
4V7XX-ray3.00N1-61[»]
4V7YX-ray3.00N1-61[»]
4V7ZX-ray3.10N1-61[»]
4V87X-ray3.10Q1-61[»]
4V8AX-ray3.20N1-61[»]
4V8BX-ray3.00Q1-61[»]
4V8CX-ray3.30Q1-61[»]
4V8DX-ray3.00Q1-61[»]
4V8EX-ray3.30Q1-61[»]
4V8FX-ray3.30Q1-61[»]
4V8GX-ray3.00N1-61[»]
4V8HX-ray3.10N1-61[»]
4V8IX-ray2.70N1-61[»]
4V8JX-ray3.90N1-61[»]
4V8NX-ray3.10N1-61[»]
4V8OX-ray3.80N1-61[»]
4V8QX-ray3.10N1-61[»]
4V8UX-ray3.70N1-61[»]
4V8XX-ray3.35N1-61[»]
4V90X-ray2.95N1-61[»]
4V95X-ray3.20N1-61[»]
4V97X-ray3.52N1-61[»]
4V9AX-ray3.30Q1-61[»]
4V9BX-ray3.10Q1-61[»]
4V9HX-ray2.86N2-61[»]
4V9IX-ray3.30N2-61[»]
4V9RX-ray3.00N1-61[»]
4V9SX-ray3.10N1-61[»]
4W2EX-ray2.90n1-61[»]
4W2GX-ray2.55N1-61[»]
4W2HX-ray2.70N1-61[»]
4W2IX-ray2.70N1-61[»]
ProteinModelPortaliQ5SHQ1.
SMRiQ5SHQ1. Positions 2-61.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SHQ1.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0199.
HOGENOMiHOG000039865.
KOiK02954.
OMAiCLRKMAN.
OrthoDBiEOG6BCT0K.
PhylomeDBiQ5SHQ1.

Family and domain databases

HAMAPiMF_01364_B. Ribosomal_S14_2_B.
InterProiIPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
IPR023053. Ribosomal_S14_Z.
[Graphical view]
PANTHERiPTHR19836. PTHR19836. 1 hit.
PfamiPF00253. Ribosomal_S14. 1 hit.
[Graphical view]
PROSITEiPS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5SHQ1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARKALIEKA KRTPKFKVRA YTRCVRCGRA RSVYRFFGLC RICLRELAHK
60
GQLPGVRKAS W
Length:61
Mass (Da):7,140
Last modified:January 23, 2007 - v3
Checksum:iBEE8AB1E1E86B531
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti36 – 361F → Y in CAA39897. (PubMed:2029902)Curated
Sequence conflicti57 – 571R → K in CAA39897. (PubMed:2029902)Curated

Mass spectrometryi

Molecular mass is 7010 Da from positions 2 - 61. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X56552 Genomic DNA. Translation: CAA39897.1.
S78490 Genomic DNA. Translation: AAB34721.1.
AP008226 Genomic DNA. Translation: BAD71502.1.
RefSeqiYP_144945.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD71502; BAD71502; BAD71502.
GeneIDi3169802.
KEGGittj:TTHA1679.
PATRICi23958313. VBITheThe93045_1649.

Cross-referencesi

Web resourcesi

T.thermophilus ribosome structure and function

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X56552 Genomic DNA. Translation: CAA39897.1.
S78490 Genomic DNA. Translation: AAB34721.1.
AP008226 Genomic DNA. Translation: BAD71502.1.
RefSeqiYP_144945.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00N1-61[»]
1HNWX-ray3.40N1-61[»]
1HNXX-ray3.40N1-61[»]
1HNZX-ray3.30N1-61[»]
1HR0X-ray3.20N1-61[»]
1I94X-ray3.20N2-61[»]
1I95X-ray4.50N2-61[»]
1I96X-ray4.20N2-61[»]
1I97X-ray4.50N2-61[»]
1IBKX-ray3.31N1-61[»]
1IBLX-ray3.11N1-61[»]
1IBMX-ray3.31N1-61[»]
1J5EX-ray3.05N2-61[»]
1JGOX-ray5.60Q1-61[»]
1JGPX-ray7.00Q1-61[»]
1JGQX-ray5.00Q1-61[»]
1L1Umodel-N1-61[»]
1ML5electron microscopy14.00Q1-61[»]
1N32X-ray3.00N2-61[»]
1N33X-ray3.35N2-61[»]
1N34X-ray3.80N2-61[»]
1N36X-ray3.65N2-61[»]
1VVJX-ray3.44N1-61[»]
1VY4X-ray2.60N1-61[»]
1VY5X-ray2.55N1-61[»]
1VY6X-ray2.90N1-61[»]
1VY7X-ray2.80N1-61[»]
1XMOX-ray3.25N1-61[»]
1XMQX-ray3.00N1-61[»]
1XNQX-ray3.05N1-61[»]
1XNRX-ray3.10N1-61[»]
2E5LX-ray3.30N2-61[»]
2F4VX-ray3.80N1-61[»]
2HHHX-ray3.35N1-61[»]
2J00X-ray2.80N1-61[»]
2J02X-ray2.80N2-61[»]
2UU9X-ray3.10N2-61[»]
2UUAX-ray2.90N2-61[»]
2UUBX-ray2.80N2-61[»]
2UUCX-ray3.10N2-61[»]
2UXBX-ray3.10N2-61[»]
2UXCX-ray2.90N2-61[»]
2UXDX-ray3.20N2-61[»]
2V46X-ray3.50N2-61[»]
2V48X-ray3.50N2-61[»]
2VQEX-ray2.50N1-61[»]
2VQFX-ray2.90N1-61[»]
2WDGX-ray3.30N1-61[»]
2WDHX-ray3.30N1-61[»]
2WDKX-ray3.50N1-61[»]
2WDMX-ray3.50N1-61[»]
2WH1X-ray3.45N1-61[»]
2WH3X-ray3.45N1-61[»]
2ZM6X-ray3.30N2-61[»]
3OTOX-ray3.69N1-61[»]
3T1HX-ray3.11N1-61[»]
3T1YX-ray2.80N1-61[»]
4AQYX-ray3.50N2-61[»]
4B3MX-ray2.90N2-61[»]
4B3RX-ray3.00N2-61[»]
4B3SX-ray3.15N2-61[»]
4B3TX-ray3.00N2-61[»]
4DR1X-ray3.60N1-61[»]
4DR2X-ray3.25N1-61[»]
4DR3X-ray3.35N1-61[»]
4DR4X-ray3.97N1-61[»]
4DR5X-ray3.45N1-61[»]
4DR6X-ray3.30N1-61[»]
4DR7X-ray3.75N1-61[»]
4DUYX-ray3.39N1-61[»]
4DUZX-ray3.65N1-61[»]
4DV0X-ray3.85N1-61[»]
4DV1X-ray3.85N1-61[»]
4DV2X-ray3.65N1-61[»]
4DV3X-ray3.55N1-61[»]
4DV4X-ray3.65N1-61[»]
4DV5X-ray3.68N1-61[»]
4DV6X-ray3.30N1-61[»]
4DV7X-ray3.29N1-61[»]
4GKJX-ray3.30N2-61[»]
4GKKX-ray3.20N2-61[»]
4JI0X-ray3.49N1-61[»]
4JI1X-ray3.14N1-61[»]
4JI2X-ray3.64N1-61[»]
4JI3X-ray3.35N1-61[»]
4JI4X-ray3.69N1-61[»]
4JI5X-ray3.85N1-61[»]
4JI6X-ray3.55N1-61[»]
4JI7X-ray3.50N1-61[»]
4JI8X-ray3.74N1-61[»]
4JV5X-ray3.16N2-61[»]
4JYAX-ray3.10N2-61[»]
4K0KX-ray3.40N2-61[»]
4KHPX-ray3.10N2-61[»]
4L47X-ray3.22N1-61[»]
4L71X-ray3.90N1-61[»]
4LELX-ray3.90N1-61[»]
4LF4X-ray3.34N1-61[»]
4LF5X-ray3.75N1-61[»]
4LF6X-ray3.31N1-61[»]
4LF7X-ray3.15N1-61[»]
4LF8X-ray3.15N1-61[»]
4LF9X-ray3.28N1-61[»]
4LFAX-ray3.65N1-61[»]
4LFBX-ray3.01N1-61[»]
4LFCX-ray3.60N1-61[»]
4LFZX-ray3.92N1-61[»]
4LNTX-ray2.94N1-61[»]
4LSKX-ray3.48N1-61[»]
4LT8X-ray3.14N1-61[»]
4NXMX-ray3.65N1-61[»]
4NXNX-ray3.54N1-61[»]
4OX9X-ray3.80N2-61[»]
4P6FX-ray3.60O1-61[»]
4P70X-ray3.68N1-61[»]
4RB7X-ray2.40N1-61[»]
4V42X-ray5.50Q1-61[»]
4V49X-ray8.70N2-61[»]
4V4AX-ray9.50N2-61[»]
4V4IX-ray3.71o-[»]
4V4PX-ray5.50Q1-61[»]
4V4RX-ray5.90N1-61[»]
4V4SX-ray6.76N1-61[»]
4V4TX-ray6.46N1-61[»]
4V4XX-ray5.00Q1-61[»]
4V4YX-ray5.50Q1-61[»]
4V4ZX-ray4.51Q1-61[»]
4V5FX-ray3.60N1-61[»]
4V5GX-ray3.60N1-61[»]
4V5JX-ray3.10N1-61[»]
4V5KX-ray3.20N1-61[»]
4V5LX-ray3.10N1-61[»]
4V5Melectron microscopy7.80N1-61[»]
4V5Nelectron microscopy7.60N1-61[»]
4V5PX-ray3.10N1-61[»]
4V5QX-ray3.10N1-61[»]
4V5RX-ray3.10N1-61[»]
4V5SX-ray3.10N1-61[»]
4V68electron microscopy6.40N2-61[»]
4V6AX-ray3.10N1-61[»]
4V6FX-ray3.10Q1-61[»]
4V6GX-ray3.50Q1-61[»]
4V7JX-ray3.30n1-61[»]
4V7KX-ray3.60n1-61[»]
4V7LX-ray3.15N1-61[»]
4V7MX-ray3.45N1-61[»]
4V7WX-ray3.00N1-61[»]
4V7XX-ray3.00N1-61[»]
4V7YX-ray3.00N1-61[»]
4V7ZX-ray3.10N1-61[»]
4V87X-ray3.10Q1-61[»]
4V8AX-ray3.20N1-61[»]
4V8BX-ray3.00Q1-61[»]
4V8CX-ray3.30Q1-61[»]
4V8DX-ray3.00Q1-61[»]
4V8EX-ray3.30Q1-61[»]
4V8FX-ray3.30Q1-61[»]
4V8GX-ray3.00N1-61[»]
4V8HX-ray3.10N1-61[»]
4V8IX-ray2.70N1-61[»]
4V8JX-ray3.90N1-61[»]
4V8NX-ray3.10N1-61[»]
4V8OX-ray3.80N1-61[»]
4V8QX-ray3.10N1-61[»]
4V8UX-ray3.70N1-61[»]
4V8XX-ray3.35N1-61[»]
4V90X-ray2.95N1-61[»]
4V95X-ray3.20N1-61[»]
4V97X-ray3.52N1-61[»]
4V9AX-ray3.30Q1-61[»]
4V9BX-ray3.10Q1-61[»]
4V9HX-ray2.86N2-61[»]
4V9IX-ray3.30N2-61[»]
4V9RX-ray3.00N1-61[»]
4V9SX-ray3.10N1-61[»]
4W2EX-ray2.90n1-61[»]
4W2GX-ray2.55N1-61[»]
4W2HX-ray2.70N1-61[»]
4W2IX-ray2.70N1-61[»]
ProteinModelPortaliQ5SHQ1.
SMRiQ5SHQ1. Positions 2-61.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA1679.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD71502; BAD71502; BAD71502.
GeneIDi3169802.
KEGGittj:TTHA1679.
PATRICi23958313. VBITheThe93045_1649.

Phylogenomic databases

eggNOGiCOG0199.
HOGENOMiHOG000039865.
KOiK02954.
OMAiCLRKMAN.
OrthoDBiEOG6BCT0K.
PhylomeDBiQ5SHQ1.

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-1718-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ5SHQ1.

Family and domain databases

HAMAPiMF_01364_B. Ribosomal_S14_2_B.
InterProiIPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
IPR023053. Ribosomal_S14_Z.
[Graphical view]
PANTHERiPTHR19836. PTHR19836. 1 hit.
PfamiPF00253. Ribosomal_S14. 1 hit.
[Graphical view]
PROSITEiPS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the spc ribosomal protein operon of Thermus aquaticus."
    Jahn O., Hartmann R.K., Erdmann V.A.
    Eur. J. Biochem. 197:733-740(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Studies on S14 protein from Thermus thermophilus possessing zinc finger-like motifs."
    Tsiboli P., Choli T.
    Biol. Chem. Hoppe-Seyler 376:127-130(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 2-61.
  3. "Complete genome sequence of Thermus thermophilus HB8."
    Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB8 / ATCC 27634 / DSM 579.
  4. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
    Tsiboli P., Herfurth E., Choli T.
    Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-23.
  5. "Studies on the Zn-containing S14 ribosomal protein from Thermus thermophilus."
    Tsiboli P., Triantafillidou D., Franceschi F., Choli-Papadopoulou T.
    Eur. J. Biochem. 256:136-141(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: COFACTOR.
  6. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
    Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
    Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: MASS SPECTROMETRY.
  7. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
  8. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
    Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
    Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  9. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  10. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
  11. "The path of messenger RNA through the ribosome."
    Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
    Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
  12. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
    Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
    EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  13. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
    Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  14. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
  15. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
    Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
    Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
  16. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
    J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.

Entry informationi

Entry nameiRS14Z_THET8
AccessioniPrimary (citable) accession number: Q5SHQ1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 29, 2005
Last sequence update: January 23, 2007
Last modified: February 4, 2015
This is version 99 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.