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Protein

50S ribosomal protein L14

Gene

rplN

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

This protein binds directly to 23S ribosomal RNA.By similarity
Contacts the 16S rRNA of the 30S subunit in two different positions helping to form bridges B5 and B8.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-1688-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L14UniRule annotation
Gene namesi
Name:rplNUniRule annotation
Ordered Locus Names:TTHA1682
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001285661 – 12250S ribosomal protein L14Add BLAST122

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L19. Forms a bridge to the 30S subunit in the 70S ribosome, contacting the 16S rRNA.

Protein-protein interaction databases

STRINGi300852.TTHA1682

Structurei

Secondary structure

1122
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi7 – 10Combined sources4
Beta strandi12 – 24Combined sources13
Beta strandi26 – 29Combined sources4
Beta strandi38 – 46Combined sources9
Beta strandi48 – 51Combined sources4
Beta strandi57 – 64Combined sources8
Beta strandi76 – 81Combined sources6
Beta strandi83 – 87Combined sources5
Beta strandi93 – 96Combined sources4
Helixi105 – 108Combined sources4
Helixi112 – 117Combined sources6

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VVJX-ray3.44RO/YO1-122[»]
1VY4X-ray2.60BO/DO1-122[»]
1VY5X-ray2.55BO/DO1-122[»]
1VY6X-ray2.90BO/DO1-122[»]
1VY7X-ray2.80BO/DO1-122[»]
4L47X-ray3.22RO/YO1-122[»]
4L71X-ray3.90RO/YO1-122[»]
4LELX-ray3.90RO/YO1-122[»]
4LFZX-ray3.92RO/YO1-122[»]
4LNTX-ray2.94RO/YO1-122[»]
4LSKX-ray3.48RO/YO1-122[»]
4LT8X-ray3.14RO/YO1-122[»]
4P6FX-ray3.60RO/YO1-122[»]
4P70X-ray3.68RO/YO1-122[»]
4TUAX-ray3.60RO/YO1-122[»]
4TUBX-ray3.60RO/YO1-122[»]
4TUCX-ray3.60RO/YO1-122[»]
4TUDX-ray3.60RO/YO1-122[»]
4TUEX-ray3.50RO/YO1-122[»]
4V42X-ray5.50BN57-121[»]
4V4PX-ray5.50N52-121[»]
4V4XX-ray5.00BN1-122[»]
4V4YX-ray5.50BN1-122[»]
4V4ZX-ray4.51BN1-122[»]
4V51X-ray2.80BO/DO1-122[»]
4V5AX-ray3.50BO/DO1-122[»]
4V5CX-ray3.30BO/DO1-122[»]
4V5DX-ray3.50BO/DO1-122[»]
4V5EX-ray3.45BO/DO1-122[»]
4V5FX-ray3.60BO/DO1-122[»]
4V5GX-ray3.60BO/DO1-122[»]
4V5JX-ray3.10BO/DO1-122[»]
4V5KX-ray3.20BO/DO1-122[»]
4V5LX-ray3.10BO1-122[»]
4V5Melectron microscopy7.80BO1-122[»]
4V5Nelectron microscopy7.60BO1-122[»]
4V5PX-ray3.10BO/DO1-122[»]
4V5QX-ray3.10BO/DO1-122[»]
4V5RX-ray3.10BO/DO1-122[»]
4V5SX-ray3.10BO/DO1-122[»]
4V68electron microscopy6.40BO1-122[»]
4V6AX-ray3.10BO/DO1-122[»]
4V6FX-ray3.10AN/DN1-122[»]
4V6GX-ray3.50BN/DN1-122[»]
4V7JX-ray3.30AO/BO1-122[»]
4V7KX-ray3.60AO/BO1-122[»]
4V7LX-ray3.00BO/DO1-122[»]
4V7MX-ray3.45BO/DO1-122[»]
4V7WX-ray3.00BO/DO1-122[»]
4V7XX-ray3.00BO/DO1-122[»]
4V7YX-ray3.00BO/DO1-122[»]
4V7ZX-ray3.10BO/DO1-122[»]
4V87X-ray3.10AN/DN1-122[»]
4V8AX-ray3.20AO/BO1-122[»]
4V8BX-ray3.00BN/DN1-122[»]
4V8CX-ray3.30AN/BN1-122[»]
4V8DX-ray3.00BN/DN1-122[»]
4V8EX-ray3.30AN/CN1-122[»]
4V8FX-ray3.30AN/DN1-122[»]
4V8GX-ray3.00BO/DO1-122[»]
4V8HX-ray3.10BO/DO1-122[»]
4V8IX-ray2.70BO/DO1-122[»]
4V8JX-ray3.90BO/DO1-122[»]
4V8NX-ray3.10BO/DO1-122[»]
4V8OX-ray3.80BO1-122[»]
4V8QX-ray3.10AO1-122[»]
4V8UX-ray3.70BO/DO1-122[»]
4V8XX-ray3.35BO/DO1-122[»]
4V90X-ray2.95BO1-122[»]
4V95X-ray3.20BO/DO1-122[»]
4V97X-ray3.52BO/DO1-122[»]
4V9AX-ray3.30BN/DN1-122[»]
4V9BX-ray3.10BN/DN1-122[»]
4V9HX-ray2.86BO1-122[»]
4V9IX-ray3.30BO/DO1-122[»]
4V9RX-ray3.00BO/DO1-122[»]
4V9SX-ray3.10BO/DO1-122[»]
4W2EX-ray2.90O1-122[»]
4W2FX-ray2.40BO/DO1-122[»]
4W2GX-ray2.55BO/DO1-122[»]
4W2HX-ray2.70BO/DO1-122[»]
4W2IX-ray2.70BO/DO1-122[»]
4W4GX-ray3.30RO/YO1-122[»]
4WPOX-ray2.80AO/CO1-122[»]
4WQ1X-ray3.1025/681-122[»]
4WQFX-ray2.80AO/CO1-122[»]
4WQRX-ray3.1525/681-122[»]
4WQUX-ray2.80AO/CO1-122[»]
4WQYX-ray2.80AO/CO1-122[»]
4WR6X-ray3.0525/681-122[»]
4WRAX-ray3.0525/681-122[»]
4WROX-ray3.05681-122[»]
4WSDX-ray2.9525/681-122[»]
4WSMX-ray3.3025/681-122[»]
4WT1X-ray3.0525/681-122[»]
4WT8X-ray3.40CN/DN1-122[»]
4WU1X-ray3.2025/681-122[»]
4WZDX-ray3.1025/681-122[»]
4WZOX-ray3.3025/681-122[»]
4Y4OX-ray2.301O/2O1-122[»]
4Y4PX-ray2.501O/2O1-122[»]
4YPBX-ray3.40RO/YO1-122[»]
4YZVX-ray3.10RO/YO1-122[»]
4Z3SX-ray2.651O/2O1-122[»]
4Z8CX-ray2.901O/2O1-122[»]
4ZERX-ray3.101O/2O1-122[»]
4ZSNX-ray3.60RO/YO1-122[»]
5A9Zelectron microscopy4.70AL1-122[»]
5AA0electron microscopy5.00AL1-122[»]
5CZPX-ray3.30RO/YO1-122[»]
5D8BX-ray3.63EB/I1-122[»]
5DFEX-ray3.10RO/YO1-122[»]
5DOXX-ray3.101O/2O1-122[»]
5DOYX-ray2.601O/2O1-122[»]
5E7KX-ray3.2025/681-122[»]
5E81X-ray2.9525/681-122[»]
5EL4X-ray3.1525/681-122[»]
5EL5X-ray3.1525/681-122[»]
5EL6X-ray3.1025/681-122[»]
5EL7X-ray3.1525/681-122[»]
5F8KX-ray2.801O/2O1-122[»]
5FDUX-ray2.901O/2O1-122[»]
5FDVX-ray2.801O/2O1-122[»]
5HAUX-ray3.001M/2M1-122[»]
5HCPX-ray2.891O/2O1-122[»]
5HCQX-ray2.801O/2O1-122[»]
5HCRX-ray2.801O/2O1-122[»]
5HD1X-ray2.701O/2O1-122[»]
5IB7X-ray2.9925/681-122[»]
5IB8X-ray3.1325/681-122[»]
5IBBX-ray2.9625/681-122[»]
5J30X-ray3.20RO/YO1-122[»]
5J3CX-ray3.04RO/YO1-122[»]
5J4BX-ray2.601O/2O1-122[»]
5J4CX-ray2.801O/2O1-122[»]
5J8BX-ray2.60O1-122[»]
5NDKX-ray2.9525/681-122[»]
5OT7electron microscopy3.80p1-122[»]
5UQ7electron microscopy3.50O1-122[»]
5UQ8electron microscopy3.20O1-122[»]
5VP2X-ray2.801O/2O1-122[»]
5W4KX-ray2.701O/2O1-122[»]
5WISX-ray2.701O/2O1-122[»]
5WITX-ray2.601O/2O1-122[»]
6C5LX-ray3.20BO/DO1-122[»]
6CFJX-ray2.801O/2O1-122[»]
6CFKX-ray2.701O/2O1-122[»]
6CFLX-ray2.601O/2O1-122[»]
6FKRX-ray3.201O/2O1-122[»]
ProteinModelPortaliQ5SHP8
SMRiQ5SHP8
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SHP8

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL14 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UNN Bacteria
COG0093 LUCA
HOGENOMiHOG000183702
KOiK02874
OMAiIKGPVAR
PhylomeDBiQ5SHP8

Family and domain databases

Gene3Di2.40.150.20, 1 hit
HAMAPiMF_01367 Ribosomal_L14, 1 hit
InterProiView protein in InterPro
IPR036853 Ribosomal_L14_sf
IPR000218 Ribosomal_L14P
IPR005745 Ribosomal_L14P_bac-type
IPR019972 Ribosomal_L14P_CS
PANTHERiPTHR11761 PTHR11761, 1 hit
PfamiView protein in Pfam
PF00238 Ribosomal_L14, 1 hit
SMARTiView protein in SMART
SM01374 Ribosomal_L14, 1 hit
SUPFAMiSSF50193 SSF50193, 1 hit
TIGRFAMsiTIGR01067 rplN_bact, 1 hit
PROSITEiView protein in PROSITE
PS00049 RIBOSOMAL_L14, 1 hit

Sequencei

Sequence statusi: Complete.

Q5SHP8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIQPQTYLEV ADNTGARKIM CIRVLKGSNA KYATVGDVIV ASVKEAIPRG
60 70 80 90 100
AVKEGDVVKA VVVRTKKEIK RPDGSAIRFD DNAAVIINNQ LEPRGTRVFG
110 120
PVARELREKG FMKIVSLAPE VL
Length:122
Mass (Da):13,303
Last modified:December 21, 2004 - v1
Checksum:i9305B92EBAAB9B6C
GO

Mass spectrometryi

Molecular mass is 13304 Da from positions 1 - 122. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD71505.1
RefSeqiWP_011228844.1, NC_006461.1
YP_144948.1, NC_006461.1

Genome annotation databases

EnsemblBacteriaiBAD71505; BAD71505; BAD71505
GeneIDi3168727
KEGGittj:TTHA1682
PATRICifig|300852.9.peg.1652

Similar proteinsi

Entry informationi

Entry nameiRL14_THET8
AccessioniPrimary (citable) accession number: Q5SHP8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 29, 2005
Last sequence update: December 21, 2004
Last modified: May 23, 2018
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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