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Q5SHN7

- RS10_THET8

UniProt

Q5SHN7 - RS10_THET8

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Protein

30S ribosomal protein S10

Gene

rpsJ

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli

Functioni

Part of the top of the 30S subunit head.

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-KW
  2. structural constituent of ribosome Source: InterPro
  3. tRNA binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-1732-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S10
Gene namesi
Name:rpsJ
Ordered Locus Names:TTHA1693
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000532: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Pathology & Biotechi

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 10510430S ribosomal protein S10PRO_0000146620Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight complex with proteins S3 and S14. Also contacts protein S9.

Protein-protein interaction databases

STRINGi300852.TTHA1693.

Structurei

Secondary structure

1
105
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi6 – 116
Turni15 – 206
Helixi22 – 254
Turni26 – 283
Beta strandi29 – 313
Beta strandi35 – 395
Beta strandi43 – 453
Beta strandi46 – 483
Beta strandi51 – 555
Beta strandi57 – 593
Beta strandi62 – 643
Beta strandi67 – 704
Beta strandi71 – 733
Beta strandi74 – 763
Turni78 – 803
Helixi81 – 844
Beta strandi85 – 873
Beta strandi92 – 943
Beta strandi95 – 984

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00J1-105[»]
1GIXX-ray5.50M1-105[»]
1HNWX-ray3.40J1-105[»]
1HNXX-ray3.40J1-105[»]
1HNZX-ray3.30J1-105[»]
1HR0X-ray3.20J1-105[»]
1I94X-ray3.20J2-105[»]
1I95X-ray4.50J2-105[»]
1I96X-ray4.20J2-105[»]
1I97X-ray4.50J2-105[»]
1IBKX-ray3.31J1-105[»]
1IBLX-ray3.11J1-105[»]
1IBMX-ray3.31J1-105[»]
1J5EX-ray3.05J2-105[»]
1JGOX-ray5.60M1-105[»]
1JGPX-ray7.00M1-105[»]
1JGQX-ray5.00M1-105[»]
1L1Umodel-J3-100[»]
1ML5electron microscopy14.00M1-105[»]
1N32X-ray3.00J2-105[»]
1N33X-ray3.35J2-105[»]
1N34X-ray3.80J2-105[»]
1N36X-ray3.65J2-105[»]
1PNSX-ray8.70J3-100[»]
1PNXX-ray9.50J3-100[»]
1VVLX-ray3.22J1-105[»]
1VVNX-ray3.22J1-105[»]
1VVPX-ray3.90J1-105[»]
1VVRX-ray3.90J1-105[»]
1VVTX-ray3.90J1-105[»]
1VVVX-ray3.90J1-105[»]
1VVXX-ray3.92J1-105[»]
1VVZX-ray3.92J1-105[»]
1VX8X-ray2.94J1-105[»]
1VXIX-ray2.94J1-105[»]
1VXKX-ray3.48J1-105[»]
1VXMX-ray3.48J1-105[»]
1VXPX-ray3.14J1-105[»]
1VXSX-ray3.14J1-105[»]
1VY0X-ray3.68J1-105[»]
1VY2X-ray3.68J1-105[»]
1XMOX-ray3.25J1-105[»]
1XMQX-ray3.00J1-105[»]
1XNQX-ray3.05J1-105[»]
1XNRX-ray3.10J1-105[»]
1YL4X-ray5.50M1-105[»]
2B64X-ray5.90J1-105[»]
2B9MX-ray6.76J1-105[»]
2B9OX-ray6.46J1-105[»]
2E5LX-ray3.30J2-105[»]
2F4VX-ray3.80J1-105[»]
2HGIX-ray5.00M1-105[»]
2HGPX-ray5.50M1-105[»]
2HGRX-ray4.51M1-105[»]
2HHHX-ray3.35J1-105[»]
2J00X-ray2.80J2-104[»]
2J02X-ray2.80J2-105[»]
2OW8X-ray3.71k-[»]
2UU9X-ray3.10J2-105[»]
2UUAX-ray2.90J2-105[»]
2UUBX-ray2.80J2-105[»]
2UUCX-ray3.10J2-105[»]
2UXBX-ray3.10J2-105[»]
2UXCX-ray2.90J2-105[»]
2UXDX-ray3.20J2-105[»]
2V46X-ray3.50J2-105[»]
2V48X-ray3.50J2-105[»]
2VQEX-ray2.50J1-105[»]
2VQFX-ray2.90J1-105[»]
2WDGX-ray3.30J1-105[»]
2WDHX-ray3.30J1-105[»]
2WDKX-ray3.50J1-105[»]
2WDMX-ray3.50J1-105[»]
2WH1X-ray3.45J1-105[»]
2WH3X-ray3.45J1-105[»]
2WRIX-ray3.60J1-105[»]
2WRKX-ray3.60J1-105[»]
2WRNX-ray3.60J1-105[»]
2WRQX-ray3.60J1-105[»]
2X9RX-ray3.10J1-105[»]
2X9TX-ray3.10J1-105[»]
2XFZX-ray3.20J1-105[»]
2XG1X-ray3.20J1-105[»]
2XQDX-ray3.10J1-105[»]
2XSYelectron microscopy7.80J1-105[»]
2XUYelectron microscopy7.60J1-105[»]
2Y0UX-ray3.10J1-105[»]
2Y0WX-ray3.10J1-105[»]
2Y0YX-ray3.10J1-105[»]
2Y10X-ray3.10J1-105[»]
2Y12X-ray3.10J1-105[»]
2Y14X-ray3.10J1-105[»]
2Y16X-ray3.10J1-105[»]
2Y18X-ray3.10J1-105[»]
2ZM6X-ray3.30J2-105[»]
3FICelectron microscopy6.40J3-101[»]
3HUWX-ray3.10J1-105[»]
3HUYX-ray3.10J1-105[»]
3I8GX-ray3.10M1-105[»]
3I8HX-ray3.10M1-105[»]
3I9BX-ray3.50M1-105[»]
3I9DX-ray3.50M1-105[»]
3KIQX-ray3.30j1-105[»]
3KISX-ray3.30j1-105[»]
3KIUX-ray3.60j1-105[»]
3KIXX-ray3.60j1-105[»]
3KNHX-ray3.00J1-105[»]
3KNJX-ray3.15J1-105[»]
3KNLX-ray3.45J1-105[»]
3KNNX-ray3.45J1-105[»]
3OGEX-ray3.00J1-105[»]
3OGYX-ray3.00J1-105[»]
3OHCX-ray3.00J1-105[»]
3OHDX-ray3.00J1-105[»]
3OHYX-ray3.00J1-105[»]
3OI0X-ray3.00J1-105[»]
3OI2X-ray3.10J1-105[»]
3OI4X-ray3.10J1-105[»]
3OTOX-ray3.69J1-105[»]
3T1HX-ray3.11J1-105[»]
3T1YX-ray2.80J1-105[»]
3TVFX-ray3.10M1-105[»]
3TVGX-ray3.10M1-105[»]
3UXSX-ray3.20J1-105[»]
3UXTX-ray3.20J1-105[»]
3UYDX-ray3.00M1-105[»]
3UYFX-ray3.00M1-105[»]
3UZ3X-ray3.30M1-105[»]
3UZ4X-ray3.30M1-105[»]
3UZ6X-ray3.00M1-105[»]
3UZ7X-ray3.00M1-105[»]
3UZGX-ray3.30M1-105[»]
3UZIX-ray3.30M1-105[»]
3UZLX-ray3.30M1-105[»]
3UZMX-ray3.30M1-105[»]
3V22X-ray3.00J1-105[»]
3V24X-ray3.00J1-105[»]
3V26X-ray3.10J1-105[»]
3V28X-ray3.10J1-105[»]
3V2CX-ray2.70J1-105[»]
3V2EX-ray2.70J1-105[»]
3V6UX-ray3.90J1-105[»]
3V6VX-ray3.90J1-105[»]
3ZN7X-ray3.10J1-105[»]
3ZNDX-ray3.10J1-105[»]
3ZVOX-ray3.80J1-105[»]
4ABRX-ray3.10J1-105[»]
4AQYX-ray3.50J2-105[»]
4B3MX-ray2.90J2-105[»]
4B3RX-ray3.00J2-105[»]
4B3SX-ray3.15J2-105[»]
4B3TX-ray3.00J2-105[»]
4B8FX-ray3.70J1-105[»]
4B8HX-ray3.70J1-105[»]
4BYDX-ray3.35J1-105[»]
4CR1X-ray2.95J1-105[»]
4DH9X-ray3.20J1-105[»]
4DHBX-ray3.20J1-105[»]
4DR1X-ray3.60J1-105[»]
4DR2X-ray3.25J1-105[»]
4DR3X-ray3.35J1-105[»]
4DR4X-ray3.97J1-105[»]
4DR5X-ray3.45J1-105[»]
4DR6X-ray3.30J1-105[»]
4DR7X-ray3.75J1-105[»]
4DUYX-ray3.39J1-105[»]
4DUZX-ray3.65J1-105[»]
4DV0X-ray3.85J1-105[»]
4DV1X-ray3.85J1-105[»]
4DV2X-ray3.65J1-105[»]
4DV3X-ray3.55J1-105[»]
4DV4X-ray3.65J1-105[»]
4DV5X-ray3.68J1-105[»]
4DV6X-ray3.30J1-105[»]
4DV7X-ray3.29J1-105[»]
4EJ9X-ray3.52J1-105[»]
4EJAX-ray3.52J1-105[»]
4G5KX-ray3.30M1-105[»]
4G5MX-ray3.30M1-105[»]
4G5TX-ray3.10M1-105[»]
4G5VX-ray3.10M1-105[»]
4GKJX-ray3.30J3-100[»]
4GKKX-ray3.20J3-100[»]
4JI0X-ray3.49J1-105[»]
4JI1X-ray3.14J1-105[»]
4JI2X-ray3.64J1-105[»]
4JI3X-ray3.35J1-105[»]
4JI4X-ray3.69J1-105[»]
4JI5X-ray3.85J1-105[»]
4JI6X-ray3.55J1-105[»]
4JI7X-ray3.50J1-105[»]
4JI8X-ray3.74J1-105[»]
4JUWX-ray2.86J3-100[»]
4JV5X-ray3.16J3-100[»]
4JYAX-ray3.10J3-100[»]
4K0KX-ray3.40J3-101[»]
4K0LX-ray3.30J3-100[»]
4K0PX-ray3.30J3-100[»]
4KHPX-ray3.10J3-100[»]
4KWZX-ray3.44J1-105[»]
4KX1X-ray3.44J1-105[»]
4LF4X-ray3.34J1-105[»]
4LF5X-ray3.75J1-105[»]
4LF6X-ray3.31J1-105[»]
4LF7X-ray3.15J1-105[»]
4LF8X-ray3.15J1-105[»]
4LF9X-ray3.28J1-105[»]
4LFAX-ray3.65J1-105[»]
4LFBX-ray3.01J1-105[»]
4LFCX-ray3.60J1-105[»]
4NVUX-ray3.00J1-105[»]
4NVWX-ray3.00J1-105[»]
4NVYX-ray3.10J1-105[»]
4NW0X-ray3.10J1-105[»]
4NXMX-ray3.65J1-105[»]
4NXNX-ray3.54J1-105[»]
4OX9X-ray3.80J2-105[»]
4QCMX-ray2.60J1-105[»]
4QCOX-ray2.60J1-105[»]
4QCQX-ray2.55J1-105[»]
4QCSX-ray2.55J1-105[»]
4QCUX-ray2.90J1-105[»]
4QCWX-ray2.90J1-105[»]
4QCYX-ray2.80J1-105[»]
4QD0X-ray2.80J1-105[»]
ProteinModelPortaliQ5SHN7.
SMRiQ5SHN7. Positions 3-100.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SHN7.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S10P family.Curated

Phylogenomic databases

eggNOGiCOG0051.
HOGENOMiHOG000270246.
KOiK02946.
OMAiVHVNKDS.
OrthoDBiEOG6VXFHB.
PhylomeDBiQ5SHN7.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5SHN7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPKIRIKLRG FDHKTLDASA QKIVEAARRS GAQVSGPIPL PTRVRRFTVI
60 70 80 90 100
RGPFKHKDSR EHFELRTHNR LVDIINPNRK TIEQLMTLDL PTGVEIEIKT

VGGGR
Length:105
Mass (Da):11,930
Last modified:January 23, 2007 - v3
Checksum:iE769CB9EFE2C4EF4
GO

Mass spectrometryi

Molecular mass is 11799 Da from positions 2 - 105. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U36504 Genomic DNA. Translation: AAA97863.1.
AP008226 Genomic DNA. Translation: BAD71516.1.
PIRiS10249. R3TW12.
RefSeqiYP_144959.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD71516; BAD71516; BAD71516.
GeneIDi3167932.
KEGGittj:TTHA1693.
PATRICi23958341. VBITheThe93045_1663.

Cross-referencesi

Web resourcesi

T.thermophilus ribosome structure and function

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U36504 Genomic DNA. Translation: AAA97863.1 .
AP008226 Genomic DNA. Translation: BAD71516.1 .
PIRi S10249. R3TW12.
RefSeqi YP_144959.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1FJG X-ray 3.00 J 1-105 [» ]
1GIX X-ray 5.50 M 1-105 [» ]
1HNW X-ray 3.40 J 1-105 [» ]
1HNX X-ray 3.40 J 1-105 [» ]
1HNZ X-ray 3.30 J 1-105 [» ]
1HR0 X-ray 3.20 J 1-105 [» ]
1I94 X-ray 3.20 J 2-105 [» ]
1I95 X-ray 4.50 J 2-105 [» ]
1I96 X-ray 4.20 J 2-105 [» ]
1I97 X-ray 4.50 J 2-105 [» ]
1IBK X-ray 3.31 J 1-105 [» ]
1IBL X-ray 3.11 J 1-105 [» ]
1IBM X-ray 3.31 J 1-105 [» ]
1J5E X-ray 3.05 J 2-105 [» ]
1JGO X-ray 5.60 M 1-105 [» ]
1JGP X-ray 7.00 M 1-105 [» ]
1JGQ X-ray 5.00 M 1-105 [» ]
1L1U model - J 3-100 [» ]
1ML5 electron microscopy 14.00 M 1-105 [» ]
1N32 X-ray 3.00 J 2-105 [» ]
1N33 X-ray 3.35 J 2-105 [» ]
1N34 X-ray 3.80 J 2-105 [» ]
1N36 X-ray 3.65 J 2-105 [» ]
1PNS X-ray 8.70 J 3-100 [» ]
1PNX X-ray 9.50 J 3-100 [» ]
1VVL X-ray 3.22 J 1-105 [» ]
1VVN X-ray 3.22 J 1-105 [» ]
1VVP X-ray 3.90 J 1-105 [» ]
1VVR X-ray 3.90 J 1-105 [» ]
1VVT X-ray 3.90 J 1-105 [» ]
1VVV X-ray 3.90 J 1-105 [» ]
1VVX X-ray 3.92 J 1-105 [» ]
1VVZ X-ray 3.92 J 1-105 [» ]
1VX8 X-ray 2.94 J 1-105 [» ]
1VXI X-ray 2.94 J 1-105 [» ]
1VXK X-ray 3.48 J 1-105 [» ]
1VXM X-ray 3.48 J 1-105 [» ]
1VXP X-ray 3.14 J 1-105 [» ]
1VXS X-ray 3.14 J 1-105 [» ]
1VY0 X-ray 3.68 J 1-105 [» ]
1VY2 X-ray 3.68 J 1-105 [» ]
1XMO X-ray 3.25 J 1-105 [» ]
1XMQ X-ray 3.00 J 1-105 [» ]
1XNQ X-ray 3.05 J 1-105 [» ]
1XNR X-ray 3.10 J 1-105 [» ]
1YL4 X-ray 5.50 M 1-105 [» ]
2B64 X-ray 5.90 J 1-105 [» ]
2B9M X-ray 6.76 J 1-105 [» ]
2B9O X-ray 6.46 J 1-105 [» ]
2E5L X-ray 3.30 J 2-105 [» ]
2F4V X-ray 3.80 J 1-105 [» ]
2HGI X-ray 5.00 M 1-105 [» ]
2HGP X-ray 5.50 M 1-105 [» ]
2HGR X-ray 4.51 M 1-105 [» ]
2HHH X-ray 3.35 J 1-105 [» ]
2J00 X-ray 2.80 J 2-104 [» ]
2J02 X-ray 2.80 J 2-105 [» ]
2OW8 X-ray 3.71 k - [» ]
2UU9 X-ray 3.10 J 2-105 [» ]
2UUA X-ray 2.90 J 2-105 [» ]
2UUB X-ray 2.80 J 2-105 [» ]
2UUC X-ray 3.10 J 2-105 [» ]
2UXB X-ray 3.10 J 2-105 [» ]
2UXC X-ray 2.90 J 2-105 [» ]
2UXD X-ray 3.20 J 2-105 [» ]
2V46 X-ray 3.50 J 2-105 [» ]
2V48 X-ray 3.50 J 2-105 [» ]
2VQE X-ray 2.50 J 1-105 [» ]
2VQF X-ray 2.90 J 1-105 [» ]
2WDG X-ray 3.30 J 1-105 [» ]
2WDH X-ray 3.30 J 1-105 [» ]
2WDK X-ray 3.50 J 1-105 [» ]
2WDM X-ray 3.50 J 1-105 [» ]
2WH1 X-ray 3.45 J 1-105 [» ]
2WH3 X-ray 3.45 J 1-105 [» ]
2WRI X-ray 3.60 J 1-105 [» ]
2WRK X-ray 3.60 J 1-105 [» ]
2WRN X-ray 3.60 J 1-105 [» ]
2WRQ X-ray 3.60 J 1-105 [» ]
2X9R X-ray 3.10 J 1-105 [» ]
2X9T X-ray 3.10 J 1-105 [» ]
2XFZ X-ray 3.20 J 1-105 [» ]
2XG1 X-ray 3.20 J 1-105 [» ]
2XQD X-ray 3.10 J 1-105 [» ]
2XSY electron microscopy 7.80 J 1-105 [» ]
2XUY electron microscopy 7.60 J 1-105 [» ]
2Y0U X-ray 3.10 J 1-105 [» ]
2Y0W X-ray 3.10 J 1-105 [» ]
2Y0Y X-ray 3.10 J 1-105 [» ]
2Y10 X-ray 3.10 J 1-105 [» ]
2Y12 X-ray 3.10 J 1-105 [» ]
2Y14 X-ray 3.10 J 1-105 [» ]
2Y16 X-ray 3.10 J 1-105 [» ]
2Y18 X-ray 3.10 J 1-105 [» ]
2ZM6 X-ray 3.30 J 2-105 [» ]
3FIC electron microscopy 6.40 J 3-101 [» ]
3HUW X-ray 3.10 J 1-105 [» ]
3HUY X-ray 3.10 J 1-105 [» ]
3I8G X-ray 3.10 M 1-105 [» ]
3I8H X-ray 3.10 M 1-105 [» ]
3I9B X-ray 3.50 M 1-105 [» ]
3I9D X-ray 3.50 M 1-105 [» ]
3KIQ X-ray 3.30 j 1-105 [» ]
3KIS X-ray 3.30 j 1-105 [» ]
3KIU X-ray 3.60 j 1-105 [» ]
3KIX X-ray 3.60 j 1-105 [» ]
3KNH X-ray 3.00 J 1-105 [» ]
3KNJ X-ray 3.15 J 1-105 [» ]
3KNL X-ray 3.45 J 1-105 [» ]
3KNN X-ray 3.45 J 1-105 [» ]
3OGE X-ray 3.00 J 1-105 [» ]
3OGY X-ray 3.00 J 1-105 [» ]
3OHC X-ray 3.00 J 1-105 [» ]
3OHD X-ray 3.00 J 1-105 [» ]
3OHY X-ray 3.00 J 1-105 [» ]
3OI0 X-ray 3.00 J 1-105 [» ]
3OI2 X-ray 3.10 J 1-105 [» ]
3OI4 X-ray 3.10 J 1-105 [» ]
3OTO X-ray 3.69 J 1-105 [» ]
3T1H X-ray 3.11 J 1-105 [» ]
3T1Y X-ray 2.80 J 1-105 [» ]
3TVF X-ray 3.10 M 1-105 [» ]
3TVG X-ray 3.10 M 1-105 [» ]
3UXS X-ray 3.20 J 1-105 [» ]
3UXT X-ray 3.20 J 1-105 [» ]
3UYD X-ray 3.00 M 1-105 [» ]
3UYF X-ray 3.00 M 1-105 [» ]
3UZ3 X-ray 3.30 M 1-105 [» ]
3UZ4 X-ray 3.30 M 1-105 [» ]
3UZ6 X-ray 3.00 M 1-105 [» ]
3UZ7 X-ray 3.00 M 1-105 [» ]
3UZG X-ray 3.30 M 1-105 [» ]
3UZI X-ray 3.30 M 1-105 [» ]
3UZL X-ray 3.30 M 1-105 [» ]
3UZM X-ray 3.30 M 1-105 [» ]
3V22 X-ray 3.00 J 1-105 [» ]
3V24 X-ray 3.00 J 1-105 [» ]
3V26 X-ray 3.10 J 1-105 [» ]
3V28 X-ray 3.10 J 1-105 [» ]
3V2C X-ray 2.70 J 1-105 [» ]
3V2E X-ray 2.70 J 1-105 [» ]
3V6U X-ray 3.90 J 1-105 [» ]
3V6V X-ray 3.90 J 1-105 [» ]
3ZN7 X-ray 3.10 J 1-105 [» ]
3ZND X-ray 3.10 J 1-105 [» ]
3ZVO X-ray 3.80 J 1-105 [» ]
4ABR X-ray 3.10 J 1-105 [» ]
4AQY X-ray 3.50 J 2-105 [» ]
4B3M X-ray 2.90 J 2-105 [» ]
4B3R X-ray 3.00 J 2-105 [» ]
4B3S X-ray 3.15 J 2-105 [» ]
4B3T X-ray 3.00 J 2-105 [» ]
4B8F X-ray 3.70 J 1-105 [» ]
4B8H X-ray 3.70 J 1-105 [» ]
4BYD X-ray 3.35 J 1-105 [» ]
4CR1 X-ray 2.95 J 1-105 [» ]
4DH9 X-ray 3.20 J 1-105 [» ]
4DHB X-ray 3.20 J 1-105 [» ]
4DR1 X-ray 3.60 J 1-105 [» ]
4DR2 X-ray 3.25 J 1-105 [» ]
4DR3 X-ray 3.35 J 1-105 [» ]
4DR4 X-ray 3.97 J 1-105 [» ]
4DR5 X-ray 3.45 J 1-105 [» ]
4DR6 X-ray 3.30 J 1-105 [» ]
4DR7 X-ray 3.75 J 1-105 [» ]
4DUY X-ray 3.39 J 1-105 [» ]
4DUZ X-ray 3.65 J 1-105 [» ]
4DV0 X-ray 3.85 J 1-105 [» ]
4DV1 X-ray 3.85 J 1-105 [» ]
4DV2 X-ray 3.65 J 1-105 [» ]
4DV3 X-ray 3.55 J 1-105 [» ]
4DV4 X-ray 3.65 J 1-105 [» ]
4DV5 X-ray 3.68 J 1-105 [» ]
4DV6 X-ray 3.30 J 1-105 [» ]
4DV7 X-ray 3.29 J 1-105 [» ]
4EJ9 X-ray 3.52 J 1-105 [» ]
4EJA X-ray 3.52 J 1-105 [» ]
4G5K X-ray 3.30 M 1-105 [» ]
4G5M X-ray 3.30 M 1-105 [» ]
4G5T X-ray 3.10 M 1-105 [» ]
4G5V X-ray 3.10 M 1-105 [» ]
4GKJ X-ray 3.30 J 3-100 [» ]
4GKK X-ray 3.20 J 3-100 [» ]
4JI0 X-ray 3.49 J 1-105 [» ]
4JI1 X-ray 3.14 J 1-105 [» ]
4JI2 X-ray 3.64 J 1-105 [» ]
4JI3 X-ray 3.35 J 1-105 [» ]
4JI4 X-ray 3.69 J 1-105 [» ]
4JI5 X-ray 3.85 J 1-105 [» ]
4JI6 X-ray 3.55 J 1-105 [» ]
4JI7 X-ray 3.50 J 1-105 [» ]
4JI8 X-ray 3.74 J 1-105 [» ]
4JUW X-ray 2.86 J 3-100 [» ]
4JV5 X-ray 3.16 J 3-100 [» ]
4JYA X-ray 3.10 J 3-100 [» ]
4K0K X-ray 3.40 J 3-101 [» ]
4K0L X-ray 3.30 J 3-100 [» ]
4K0P X-ray 3.30 J 3-100 [» ]
4KHP X-ray 3.10 J 3-100 [» ]
4KWZ X-ray 3.44 J 1-105 [» ]
4KX1 X-ray 3.44 J 1-105 [» ]
4LF4 X-ray 3.34 J 1-105 [» ]
4LF5 X-ray 3.75 J 1-105 [» ]
4LF6 X-ray 3.31 J 1-105 [» ]
4LF7 X-ray 3.15 J 1-105 [» ]
4LF8 X-ray 3.15 J 1-105 [» ]
4LF9 X-ray 3.28 J 1-105 [» ]
4LFA X-ray 3.65 J 1-105 [» ]
4LFB X-ray 3.01 J 1-105 [» ]
4LFC X-ray 3.60 J 1-105 [» ]
4NVU X-ray 3.00 J 1-105 [» ]
4NVW X-ray 3.00 J 1-105 [» ]
4NVY X-ray 3.10 J 1-105 [» ]
4NW0 X-ray 3.10 J 1-105 [» ]
4NXM X-ray 3.65 J 1-105 [» ]
4NXN X-ray 3.54 J 1-105 [» ]
4OX9 X-ray 3.80 J 2-105 [» ]
4QCM X-ray 2.60 J 1-105 [» ]
4QCO X-ray 2.60 J 1-105 [» ]
4QCQ X-ray 2.55 J 1-105 [» ]
4QCS X-ray 2.55 J 1-105 [» ]
4QCU X-ray 2.90 J 1-105 [» ]
4QCW X-ray 2.90 J 1-105 [» ]
4QCY X-ray 2.80 J 1-105 [» ]
4QD0 X-ray 2.80 J 1-105 [» ]
ProteinModelPortali Q5SHN7.
SMRi Q5SHN7. Positions 3-100.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 300852.TTHA1693.

Chemistry

DrugBanki DB01421. Paromomycin.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAD71516 ; BAD71516 ; BAD71516 .
GeneIDi 3167932.
KEGGi ttj:TTHA1693.
PATRICi 23958341. VBITheThe93045_1663.

Phylogenomic databases

eggNOGi COG0051.
HOGENOMi HOG000270246.
KOi K02946.
OMAi VHVNKDS.
OrthoDBi EOG6VXFHB.
PhylomeDBi Q5SHN7.

Enzyme and pathway databases

BioCyci TTHE300852:GH8R-1732-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q5SHN7.

Family and domain databases

Gene3Di 3.30.70.600. 1 hit.
HAMAPi MF_00508. Ribosomal_S10.
InterProi IPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
[Graphical view ]
PANTHERi PTHR11700. PTHR11700. 1 hit.
Pfami PF00338. Ribosomal_S10. 1 hit.
[Graphical view ]
PRINTSi PR00971. RIBOSOMALS10.
SUPFAMi SSF54999. SSF54999. 1 hit.
TIGRFAMsi TIGR01049. rpsJ_bact. 1 hit.
PROSITEi PS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Direct linkage of str-, S10- and spc-related gene clusters in Thermus thermophilus HB8, and sequences of ribosomal proteins L4 and S10."
    Pfeiffer T., Jorcke D., Feltens R., Hartmann R.K.
    Gene 167:141-145(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Complete genome sequence of Thermus thermophilus HB8."
    Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB8 / ATCC 27634 / DSM 579.
  3. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
    Tsiboli P., Herfurth E., Choli T.
    Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-33.
  4. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
    Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
    Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: MASS SPECTROMETRY.
  5. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
  6. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
    Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
    Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  7. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  8. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
  9. "The path of messenger RNA through the ribosome."
    Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
    Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
  10. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
    Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
    EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  11. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
    Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  12. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
  13. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
    Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
    Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
  14. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
    J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.

Entry informationi

Entry nameiRS10_THET8
AccessioniPrimary (citable) accession number: Q5SHN7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 29, 2005
Last sequence update: January 23, 2007
Last modified: October 29, 2014
This is version 95 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3