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Q5SHN7

- RS10_THET8

UniProt

Q5SHN7 - RS10_THET8

Protein

30S ribosomal protein S10

Gene

rpsJ

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Part of the top of the 30S subunit head.

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro
    3. tRNA binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE300852:GH8R-1732-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S10
    Gene namesi
    Name:rpsJ
    Ordered Locus Names:TTHA1693
    OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
    Taxonomic identifieri300852 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000532: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11Removed1 Publication
    Chaini2 – 10510430S ribosomal protein S10PRO_0000146620Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Forms a tight complex with proteins S3 and S14. Also contacts protein S9.

    Protein-protein interaction databases

    STRINGi300852.TTHA1693.

    Structurei

    Secondary structure

    1
    105
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi6 – 116
    Turni15 – 206
    Helixi22 – 254
    Turni26 – 283
    Beta strandi29 – 313
    Beta strandi35 – 395
    Beta strandi43 – 453
    Beta strandi46 – 483
    Beta strandi51 – 555
    Beta strandi57 – 593
    Beta strandi62 – 643
    Beta strandi67 – 704
    Beta strandi71 – 733
    Beta strandi74 – 763
    Turni78 – 803
    Helixi81 – 844
    Beta strandi85 – 873
    Beta strandi92 – 943
    Beta strandi95 – 984

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1FJGX-ray3.00J1-105[»]
    1GIXX-ray5.50M1-105[»]
    1HNWX-ray3.40J1-105[»]
    1HNXX-ray3.40J1-105[»]
    1HNZX-ray3.30J1-105[»]
    1HR0X-ray3.20J1-105[»]
    1I94X-ray3.20J2-105[»]
    1I95X-ray4.50J2-105[»]
    1I96X-ray4.20J2-105[»]
    1I97X-ray4.50J2-105[»]
    1IBKX-ray3.31J1-105[»]
    1IBLX-ray3.11J1-105[»]
    1IBMX-ray3.31J1-105[»]
    1J5EX-ray3.05J2-105[»]
    1JGOX-ray5.60M1-105[»]
    1JGPX-ray7.00M1-105[»]
    1JGQX-ray5.00M1-105[»]
    1L1Umodel-J3-100[»]
    1ML5electron microscopy14.00M1-105[»]
    1N32X-ray3.00J2-105[»]
    1N33X-ray3.35J2-105[»]
    1N34X-ray3.80J2-105[»]
    1N36X-ray3.65J2-105[»]
    1PNSX-ray8.70J3-100[»]
    1PNXX-ray9.50J3-100[»]
    1XMOX-ray3.25J1-105[»]
    1XMQX-ray3.00J1-105[»]
    1XNQX-ray3.05J1-105[»]
    1XNRX-ray3.10J1-105[»]
    1YL4X-ray5.50M1-105[»]
    2B64X-ray5.90J1-105[»]
    2B9MX-ray6.76J1-105[»]
    2B9OX-ray6.46J1-105[»]
    2E5LX-ray3.30J2-105[»]
    2F4VX-ray3.80J1-105[»]
    2HGIX-ray5.00M1-105[»]
    2HGPX-ray5.50M1-105[»]
    2HGRX-ray4.51M1-105[»]
    2HHHX-ray3.35J1-105[»]
    2J00X-ray2.80J2-104[»]
    2J02X-ray2.80J2-105[»]
    2OW8X-ray3.71k-[»]
    2UU9X-ray3.10J2-105[»]
    2UUAX-ray2.90J2-105[»]
    2UUBX-ray2.80J2-105[»]
    2UUCX-ray3.10J2-105[»]
    2UXBX-ray3.10J2-105[»]
    2UXCX-ray2.90J2-105[»]
    2UXDX-ray3.20J2-105[»]
    2V46X-ray3.50J2-105[»]
    2V48X-ray3.50J2-105[»]
    2VQEX-ray2.50J1-105[»]
    2VQFX-ray2.90J1-105[»]
    2WDGX-ray3.30J1-105[»]
    2WDHX-ray3.30J1-105[»]
    2WDKX-ray3.50J1-105[»]
    2WDMX-ray3.50J1-105[»]
    2WH1X-ray3.45J1-105[»]
    2WH3X-ray3.45J1-105[»]
    2WRIX-ray3.60J1-105[»]
    2WRKX-ray3.60J1-105[»]
    2WRNX-ray3.60J1-105[»]
    2WRQX-ray3.60J1-105[»]
    2X9RX-ray3.10J1-105[»]
    2X9TX-ray3.10J1-105[»]
    2XFZX-ray3.20J1-105[»]
    2XG1X-ray3.20J1-105[»]
    2XQDX-ray3.10J1-105[»]
    2XSYelectron microscopy7.80J1-105[»]
    2XUYelectron microscopy7.60J1-105[»]
    2Y0UX-ray3.10J1-105[»]
    2Y0WX-ray3.10J1-105[»]
    2Y0YX-ray3.10J1-105[»]
    2Y10X-ray3.10J1-105[»]
    2Y12X-ray3.10J1-105[»]
    2Y14X-ray3.10J1-105[»]
    2Y16X-ray3.10J1-105[»]
    2Y18X-ray3.10J1-105[»]
    2ZM6X-ray3.30J2-105[»]
    3FICelectron microscopy6.40J3-101[»]
    3HUWX-ray3.10J1-105[»]
    3HUYX-ray3.10J1-105[»]
    3I8GX-ray3.10M1-105[»]
    3I8HX-ray3.10M1-105[»]
    3I9BX-ray3.50M1-105[»]
    3I9DX-ray3.50M1-105[»]
    3KIQX-ray3.30j1-105[»]
    3KISX-ray3.30j1-105[»]
    3KIUX-ray3.60j1-105[»]
    3KIXX-ray3.60j1-105[»]
    3KNHX-ray3.00J1-105[»]
    3KNJX-ray3.15J1-105[»]
    3KNLX-ray3.45J1-105[»]
    3KNNX-ray3.45J1-105[»]
    3OGEX-ray3.00J1-105[»]
    3OGYX-ray3.00J1-105[»]
    3OHCX-ray3.00J1-105[»]
    3OHDX-ray3.00J1-105[»]
    3OHYX-ray3.00J1-105[»]
    3OI0X-ray3.00J1-105[»]
    3OI2X-ray3.10J1-105[»]
    3OI4X-ray3.10J1-105[»]
    3OTOX-ray3.69J1-105[»]
    3T1HX-ray3.11J1-105[»]
    3T1YX-ray2.80J1-105[»]
    3TVFX-ray3.10M1-105[»]
    3TVGX-ray3.10M1-105[»]
    3UXSX-ray3.20J1-105[»]
    3UXTX-ray3.20J1-105[»]
    3UYDX-ray3.00M1-105[»]
    3UYFX-ray3.00M1-105[»]
    3UZ3X-ray3.30M1-105[»]
    3UZ4X-ray3.30M1-105[»]
    3UZ6X-ray3.00M1-105[»]
    3UZ7X-ray3.00M1-105[»]
    3UZGX-ray3.30M1-105[»]
    3UZIX-ray3.30M1-105[»]
    3UZLX-ray3.30M1-105[»]
    3UZMX-ray3.30M1-105[»]
    3V22X-ray3.00J1-105[»]
    3V24X-ray3.00J1-105[»]
    3V26X-ray3.10J1-105[»]
    3V28X-ray3.10J1-105[»]
    3V2CX-ray2.70J1-105[»]
    3V2EX-ray2.70J1-105[»]
    3V6UX-ray3.90J1-105[»]
    3V6VX-ray3.90J1-105[»]
    3ZN7X-ray3.10J1-105[»]
    3ZNDX-ray3.10J1-105[»]
    3ZVOX-ray3.80J1-105[»]
    4ABRX-ray3.10J1-105[»]
    4AQYX-ray3.50J2-105[»]
    4B3MX-ray2.90J2-105[»]
    4B3RX-ray3.00J2-105[»]
    4B3SX-ray3.15J2-105[»]
    4B3TX-ray3.00J2-105[»]
    4B8FX-ray3.70J1-105[»]
    4B8HX-ray3.70J1-105[»]
    4BYDX-ray3.35J1-105[»]
    4CR1X-ray2.95J1-105[»]
    4DH9X-ray3.20J1-105[»]
    4DHBX-ray3.20J1-105[»]
    4DR1X-ray3.60J1-105[»]
    4DR2X-ray3.25J1-105[»]
    4DR3X-ray3.35J1-105[»]
    4DR4X-ray3.97J1-105[»]
    4DR5X-ray3.45J1-105[»]
    4DR6X-ray3.30J1-105[»]
    4DR7X-ray3.75J1-105[»]
    4DUYX-ray3.39J1-105[»]
    4DUZX-ray3.65J1-105[»]
    4DV0X-ray3.85J1-105[»]
    4DV1X-ray3.85J1-105[»]
    4DV2X-ray3.65J1-105[»]
    4DV3X-ray3.55J1-105[»]
    4DV4X-ray3.65J1-105[»]
    4DV5X-ray3.68J1-105[»]
    4DV6X-ray3.30J1-105[»]
    4DV7X-ray3.29J1-105[»]
    4EJ9X-ray3.52J1-105[»]
    4EJAX-ray3.52J1-105[»]
    4G5KX-ray3.30M1-105[»]
    4G5MX-ray3.30M1-105[»]
    4G5TX-ray3.10M1-105[»]
    4G5VX-ray3.10M1-105[»]
    4GKJX-ray3.30J3-100[»]
    4GKKX-ray3.20J3-100[»]
    4JI0X-ray3.49J1-105[»]
    4JI1X-ray3.14J1-105[»]
    4JI2X-ray3.64J1-105[»]
    4JI3X-ray3.35J1-105[»]
    4JI4X-ray3.69J1-105[»]
    4JI5X-ray3.85J1-105[»]
    4JI6X-ray3.55J1-105[»]
    4JI7X-ray3.50J1-105[»]
    4JI8X-ray3.74J1-105[»]
    4JUWX-ray2.86J3-100[»]
    4JV5X-ray3.16J3-100[»]
    4JYAX-ray3.10J3-100[»]
    4K0KX-ray3.40J3-101[»]
    4K0LX-ray3.30J3-100[»]
    4K0PX-ray3.30J3-100[»]
    4KHPX-ray3.10J3-100[»]
    4NVUX-ray3.00J1-105[»]
    4NVWX-ray3.00J1-105[»]
    4NVYX-ray3.10J1-105[»]
    4NW0X-ray3.10J1-105[»]
    4NXMX-ray3.65J1-105[»]
    4NXNX-ray3.54J1-105[»]
    4OX9X-ray3.80J2-105[»]
    ProteinModelPortaliQ5SHN7.
    SMRiQ5SHN7. Positions 3-100.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ5SHN7.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S10P family.Curated

    Phylogenomic databases

    eggNOGiCOG0051.
    HOGENOMiHOG000270246.
    KOiK02946.
    OMAiVHVNKDS.
    OrthoDBiEOG6VXFHB.
    PhylomeDBiQ5SHN7.

    Family and domain databases

    Gene3Di3.30.70.600. 1 hit.
    HAMAPiMF_00508. Ribosomal_S10.
    InterProiIPR001848. Ribosomal_S10.
    IPR018268. Ribosomal_S10_CS.
    IPR027486. Ribosomal_S10_dom.
    [Graphical view]
    PANTHERiPTHR11700. PTHR11700. 1 hit.
    PfamiPF00338. Ribosomal_S10. 1 hit.
    [Graphical view]
    PRINTSiPR00971. RIBOSOMALS10.
    SUPFAMiSSF54999. SSF54999. 1 hit.
    TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.
    PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q5SHN7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPKIRIKLRG FDHKTLDASA QKIVEAARRS GAQVSGPIPL PTRVRRFTVI    50
    RGPFKHKDSR EHFELRTHNR LVDIINPNRK TIEQLMTLDL PTGVEIEIKT 100
    VGGGR 105
    Length:105
    Mass (Da):11,930
    Last modified:January 23, 2007 - v3
    Checksum:iE769CB9EFE2C4EF4
    GO

    Mass spectrometryi

    Molecular mass is 11799 Da from positions 2 - 105. Determined by MALDI. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U36504 Genomic DNA. Translation: AAA97863.1.
    AP008226 Genomic DNA. Translation: BAD71516.1.
    PIRiS10249. R3TW12.
    RefSeqiYP_144959.1. NC_006461.1.

    Genome annotation databases

    EnsemblBacteriaiBAD71516; BAD71516; BAD71516.
    GeneIDi3167932.
    KEGGittj:TTHA1693.
    PATRICi23958341. VBITheThe93045_1663.

    Cross-referencesi

    Web resourcesi

    T.thermophilus ribosome structure and function

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U36504 Genomic DNA. Translation: AAA97863.1 .
    AP008226 Genomic DNA. Translation: BAD71516.1 .
    PIRi S10249. R3TW12.
    RefSeqi YP_144959.1. NC_006461.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1FJG X-ray 3.00 J 1-105 [» ]
    1GIX X-ray 5.50 M 1-105 [» ]
    1HNW X-ray 3.40 J 1-105 [» ]
    1HNX X-ray 3.40 J 1-105 [» ]
    1HNZ X-ray 3.30 J 1-105 [» ]
    1HR0 X-ray 3.20 J 1-105 [» ]
    1I94 X-ray 3.20 J 2-105 [» ]
    1I95 X-ray 4.50 J 2-105 [» ]
    1I96 X-ray 4.20 J 2-105 [» ]
    1I97 X-ray 4.50 J 2-105 [» ]
    1IBK X-ray 3.31 J 1-105 [» ]
    1IBL X-ray 3.11 J 1-105 [» ]
    1IBM X-ray 3.31 J 1-105 [» ]
    1J5E X-ray 3.05 J 2-105 [» ]
    1JGO X-ray 5.60 M 1-105 [» ]
    1JGP X-ray 7.00 M 1-105 [» ]
    1JGQ X-ray 5.00 M 1-105 [» ]
    1L1U model - J 3-100 [» ]
    1ML5 electron microscopy 14.00 M 1-105 [» ]
    1N32 X-ray 3.00 J 2-105 [» ]
    1N33 X-ray 3.35 J 2-105 [» ]
    1N34 X-ray 3.80 J 2-105 [» ]
    1N36 X-ray 3.65 J 2-105 [» ]
    1PNS X-ray 8.70 J 3-100 [» ]
    1PNX X-ray 9.50 J 3-100 [» ]
    1XMO X-ray 3.25 J 1-105 [» ]
    1XMQ X-ray 3.00 J 1-105 [» ]
    1XNQ X-ray 3.05 J 1-105 [» ]
    1XNR X-ray 3.10 J 1-105 [» ]
    1YL4 X-ray 5.50 M 1-105 [» ]
    2B64 X-ray 5.90 J 1-105 [» ]
    2B9M X-ray 6.76 J 1-105 [» ]
    2B9O X-ray 6.46 J 1-105 [» ]
    2E5L X-ray 3.30 J 2-105 [» ]
    2F4V X-ray 3.80 J 1-105 [» ]
    2HGI X-ray 5.00 M 1-105 [» ]
    2HGP X-ray 5.50 M 1-105 [» ]
    2HGR X-ray 4.51 M 1-105 [» ]
    2HHH X-ray 3.35 J 1-105 [» ]
    2J00 X-ray 2.80 J 2-104 [» ]
    2J02 X-ray 2.80 J 2-105 [» ]
    2OW8 X-ray 3.71 k - [» ]
    2UU9 X-ray 3.10 J 2-105 [» ]
    2UUA X-ray 2.90 J 2-105 [» ]
    2UUB X-ray 2.80 J 2-105 [» ]
    2UUC X-ray 3.10 J 2-105 [» ]
    2UXB X-ray 3.10 J 2-105 [» ]
    2UXC X-ray 2.90 J 2-105 [» ]
    2UXD X-ray 3.20 J 2-105 [» ]
    2V46 X-ray 3.50 J 2-105 [» ]
    2V48 X-ray 3.50 J 2-105 [» ]
    2VQE X-ray 2.50 J 1-105 [» ]
    2VQF X-ray 2.90 J 1-105 [» ]
    2WDG X-ray 3.30 J 1-105 [» ]
    2WDH X-ray 3.30 J 1-105 [» ]
    2WDK X-ray 3.50 J 1-105 [» ]
    2WDM X-ray 3.50 J 1-105 [» ]
    2WH1 X-ray 3.45 J 1-105 [» ]
    2WH3 X-ray 3.45 J 1-105 [» ]
    2WRI X-ray 3.60 J 1-105 [» ]
    2WRK X-ray 3.60 J 1-105 [» ]
    2WRN X-ray 3.60 J 1-105 [» ]
    2WRQ X-ray 3.60 J 1-105 [» ]
    2X9R X-ray 3.10 J 1-105 [» ]
    2X9T X-ray 3.10 J 1-105 [» ]
    2XFZ X-ray 3.20 J 1-105 [» ]
    2XG1 X-ray 3.20 J 1-105 [» ]
    2XQD X-ray 3.10 J 1-105 [» ]
    2XSY electron microscopy 7.80 J 1-105 [» ]
    2XUY electron microscopy 7.60 J 1-105 [» ]
    2Y0U X-ray 3.10 J 1-105 [» ]
    2Y0W X-ray 3.10 J 1-105 [» ]
    2Y0Y X-ray 3.10 J 1-105 [» ]
    2Y10 X-ray 3.10 J 1-105 [» ]
    2Y12 X-ray 3.10 J 1-105 [» ]
    2Y14 X-ray 3.10 J 1-105 [» ]
    2Y16 X-ray 3.10 J 1-105 [» ]
    2Y18 X-ray 3.10 J 1-105 [» ]
    2ZM6 X-ray 3.30 J 2-105 [» ]
    3FIC electron microscopy 6.40 J 3-101 [» ]
    3HUW X-ray 3.10 J 1-105 [» ]
    3HUY X-ray 3.10 J 1-105 [» ]
    3I8G X-ray 3.10 M 1-105 [» ]
    3I8H X-ray 3.10 M 1-105 [» ]
    3I9B X-ray 3.50 M 1-105 [» ]
    3I9D X-ray 3.50 M 1-105 [» ]
    3KIQ X-ray 3.30 j 1-105 [» ]
    3KIS X-ray 3.30 j 1-105 [» ]
    3KIU X-ray 3.60 j 1-105 [» ]
    3KIX X-ray 3.60 j 1-105 [» ]
    3KNH X-ray 3.00 J 1-105 [» ]
    3KNJ X-ray 3.15 J 1-105 [» ]
    3KNL X-ray 3.45 J 1-105 [» ]
    3KNN X-ray 3.45 J 1-105 [» ]
    3OGE X-ray 3.00 J 1-105 [» ]
    3OGY X-ray 3.00 J 1-105 [» ]
    3OHC X-ray 3.00 J 1-105 [» ]
    3OHD X-ray 3.00 J 1-105 [» ]
    3OHY X-ray 3.00 J 1-105 [» ]
    3OI0 X-ray 3.00 J 1-105 [» ]
    3OI2 X-ray 3.10 J 1-105 [» ]
    3OI4 X-ray 3.10 J 1-105 [» ]
    3OTO X-ray 3.69 J 1-105 [» ]
    3T1H X-ray 3.11 J 1-105 [» ]
    3T1Y X-ray 2.80 J 1-105 [» ]
    3TVF X-ray 3.10 M 1-105 [» ]
    3TVG X-ray 3.10 M 1-105 [» ]
    3UXS X-ray 3.20 J 1-105 [» ]
    3UXT X-ray 3.20 J 1-105 [» ]
    3UYD X-ray 3.00 M 1-105 [» ]
    3UYF X-ray 3.00 M 1-105 [» ]
    3UZ3 X-ray 3.30 M 1-105 [» ]
    3UZ4 X-ray 3.30 M 1-105 [» ]
    3UZ6 X-ray 3.00 M 1-105 [» ]
    3UZ7 X-ray 3.00 M 1-105 [» ]
    3UZG X-ray 3.30 M 1-105 [» ]
    3UZI X-ray 3.30 M 1-105 [» ]
    3UZL X-ray 3.30 M 1-105 [» ]
    3UZM X-ray 3.30 M 1-105 [» ]
    3V22 X-ray 3.00 J 1-105 [» ]
    3V24 X-ray 3.00 J 1-105 [» ]
    3V26 X-ray 3.10 J 1-105 [» ]
    3V28 X-ray 3.10 J 1-105 [» ]
    3V2C X-ray 2.70 J 1-105 [» ]
    3V2E X-ray 2.70 J 1-105 [» ]
    3V6U X-ray 3.90 J 1-105 [» ]
    3V6V X-ray 3.90 J 1-105 [» ]
    3ZN7 X-ray 3.10 J 1-105 [» ]
    3ZND X-ray 3.10 J 1-105 [» ]
    3ZVO X-ray 3.80 J 1-105 [» ]
    4ABR X-ray 3.10 J 1-105 [» ]
    4AQY X-ray 3.50 J 2-105 [» ]
    4B3M X-ray 2.90 J 2-105 [» ]
    4B3R X-ray 3.00 J 2-105 [» ]
    4B3S X-ray 3.15 J 2-105 [» ]
    4B3T X-ray 3.00 J 2-105 [» ]
    4B8F X-ray 3.70 J 1-105 [» ]
    4B8H X-ray 3.70 J 1-105 [» ]
    4BYD X-ray 3.35 J 1-105 [» ]
    4CR1 X-ray 2.95 J 1-105 [» ]
    4DH9 X-ray 3.20 J 1-105 [» ]
    4DHB X-ray 3.20 J 1-105 [» ]
    4DR1 X-ray 3.60 J 1-105 [» ]
    4DR2 X-ray 3.25 J 1-105 [» ]
    4DR3 X-ray 3.35 J 1-105 [» ]
    4DR4 X-ray 3.97 J 1-105 [» ]
    4DR5 X-ray 3.45 J 1-105 [» ]
    4DR6 X-ray 3.30 J 1-105 [» ]
    4DR7 X-ray 3.75 J 1-105 [» ]
    4DUY X-ray 3.39 J 1-105 [» ]
    4DUZ X-ray 3.65 J 1-105 [» ]
    4DV0 X-ray 3.85 J 1-105 [» ]
    4DV1 X-ray 3.85 J 1-105 [» ]
    4DV2 X-ray 3.65 J 1-105 [» ]
    4DV3 X-ray 3.55 J 1-105 [» ]
    4DV4 X-ray 3.65 J 1-105 [» ]
    4DV5 X-ray 3.68 J 1-105 [» ]
    4DV6 X-ray 3.30 J 1-105 [» ]
    4DV7 X-ray 3.29 J 1-105 [» ]
    4EJ9 X-ray 3.52 J 1-105 [» ]
    4EJA X-ray 3.52 J 1-105 [» ]
    4G5K X-ray 3.30 M 1-105 [» ]
    4G5M X-ray 3.30 M 1-105 [» ]
    4G5T X-ray 3.10 M 1-105 [» ]
    4G5V X-ray 3.10 M 1-105 [» ]
    4GKJ X-ray 3.30 J 3-100 [» ]
    4GKK X-ray 3.20 J 3-100 [» ]
    4JI0 X-ray 3.49 J 1-105 [» ]
    4JI1 X-ray 3.14 J 1-105 [» ]
    4JI2 X-ray 3.64 J 1-105 [» ]
    4JI3 X-ray 3.35 J 1-105 [» ]
    4JI4 X-ray 3.69 J 1-105 [» ]
    4JI5 X-ray 3.85 J 1-105 [» ]
    4JI6 X-ray 3.55 J 1-105 [» ]
    4JI7 X-ray 3.50 J 1-105 [» ]
    4JI8 X-ray 3.74 J 1-105 [» ]
    4JUW X-ray 2.86 J 3-100 [» ]
    4JV5 X-ray 3.16 J 3-100 [» ]
    4JYA X-ray 3.10 J 3-100 [» ]
    4K0K X-ray 3.40 J 3-101 [» ]
    4K0L X-ray 3.30 J 3-100 [» ]
    4K0P X-ray 3.30 J 3-100 [» ]
    4KHP X-ray 3.10 J 3-100 [» ]
    4NVU X-ray 3.00 J 1-105 [» ]
    4NVW X-ray 3.00 J 1-105 [» ]
    4NVY X-ray 3.10 J 1-105 [» ]
    4NW0 X-ray 3.10 J 1-105 [» ]
    4NXM X-ray 3.65 J 1-105 [» ]
    4NXN X-ray 3.54 J 1-105 [» ]
    4OX9 X-ray 3.80 J 2-105 [» ]
    ProteinModelPortali Q5SHN7.
    SMRi Q5SHN7. Positions 3-100.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 300852.TTHA1693.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD71516 ; BAD71516 ; BAD71516 .
    GeneIDi 3167932.
    KEGGi ttj:TTHA1693.
    PATRICi 23958341. VBITheThe93045_1663.

    Phylogenomic databases

    eggNOGi COG0051.
    HOGENOMi HOG000270246.
    KOi K02946.
    OMAi VHVNKDS.
    OrthoDBi EOG6VXFHB.
    PhylomeDBi Q5SHN7.

    Enzyme and pathway databases

    BioCyci TTHE300852:GH8R-1732-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q5SHN7.

    Family and domain databases

    Gene3Di 3.30.70.600. 1 hit.
    HAMAPi MF_00508. Ribosomal_S10.
    InterProi IPR001848. Ribosomal_S10.
    IPR018268. Ribosomal_S10_CS.
    IPR027486. Ribosomal_S10_dom.
    [Graphical view ]
    PANTHERi PTHR11700. PTHR11700. 1 hit.
    Pfami PF00338. Ribosomal_S10. 1 hit.
    [Graphical view ]
    PRINTSi PR00971. RIBOSOMALS10.
    SUPFAMi SSF54999. SSF54999. 1 hit.
    TIGRFAMsi TIGR01049. rpsJ_bact. 1 hit.
    PROSITEi PS00361. RIBOSOMAL_S10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Direct linkage of str-, S10- and spc-related gene clusters in Thermus thermophilus HB8, and sequences of ribosomal proteins L4 and S10."
      Pfeiffer T., Jorcke D., Feltens R., Hartmann R.K.
      Gene 167:141-145(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete genome sequence of Thermus thermophilus HB8."
      Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
      Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB8 / ATCC 27634 / DSM 579.
    3. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
      Tsiboli P., Herfurth E., Choli T.
      Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 2-33.
    4. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
      Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
      Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: MASS SPECTROMETRY.
    5. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
    6. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
      Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
      Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    7. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    8. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
    9. "The path of messenger RNA through the ribosome."
      Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
      Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
    10. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
      Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
      EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    11. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
      Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    12. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
    13. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
      Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
      Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
    14. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
      J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.

    Entry informationi

    Entry nameiRS10_THET8
    AccessioniPrimary (citable) accession number: Q5SHN7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 29, 2005
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 94 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3