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Q5SGZ2 (Q5SGZ2_THET8) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Acyl-CoA dehydrogenase EMBL BAD71761.1
Gene names
Ordered Locus Names:TTHA1938
OrganismThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifier300852 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus

Protein attributes

Sequence length387 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the acyl-CoA dehydrogenase family. RuleBase RU004309

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding125 – 1284FAD PDB 2D29
Nucleotide binding158 – 1603FAD PDB 2D29
Nucleotide binding284 – 2852FAD PDB 2D29
Nucleotide binding371 – 3733FAD PDB 2D29

Sites

Binding site1341FAD PDB 2D29
Binding site2741FAD PDB 2D29
Binding site3421FAD; via carbonyl oxygen PDB 2D29
Binding site3461FAD; via amide nitrogen PDB 2D29

Sequences

Sequence LengthMass (Da)Tools
Q5SGZ2 [UniParc].

Last modified December 21, 2004. Version 1.
Checksum: 7CC9810AAB33555A

FASTA38741,532
        10         20         30         40         50         60 
MGLWFEEGAE ERQVLGPFRE FLKAEVAPGA AERDRTGAFP WDLVRKLAEF GVFGALVPEA 

        70         80         90        100        110        120 
YGGAGLSTRL FARMVEAIAY YDGALALTVA SHNSLATGHI LLAGSEAQKE AFLPKLASGE 

       130        140        150        160        170        180 
ALGAWGLTEP GSGSDAAALK TKAEKVEGGW RLNGTKQFIT QGSVAGVYVV MARTDPPPSP 

       190        200        210        220        230        240 
ERKHQGISAF AFFRPERGLK VGRKEEKLGL TASDTAQLIL EDLFVPEEAL LGERGKGFYD 

       250        260        270        280        290        300 
VLRVLDGGRI GIAAMAVGLG QAALDYALAY AKGREAFGRP IAEFEGVSFK LAEAATELEA 

       310        320        330        340        350        360 
ARLLYLKAAE LKDAGRPFTL EAAQAKLFAS EAAVKACDEA IQILGGYGYV KDYPVERYWR 

       370        380 
DARLTRIGEG TSEILKLVIA RRLLEAV

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Thermus thermophilus HB8."
Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HB8 / ATCC 27634 / DSM 579.
[2]"Crystal structure of project ID TT0172 from Thermus thermophilus HB8."
Shimizu K., Kunishima N.
Submitted (NOV-2004) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS).
[3]"Crystal structure of acyl-CoA dehydrogenase."
Murayama K., Kinebuchi T., Shirouzu M., Yokoyama S.
Submitted (JUN-2005) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS).
[4]"Structural study on project ID TT0172 from Thermus thermophilus HB8."
Shimizu K., Kunishima N.
Submitted (SEP-2005) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.65 ANGSTROMS) IN COMPLEX WITH FAD.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP008226 Genomic DNA. Translation: BAD71761.1.
RefSeqYP_145204.1. NC_006461.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1WS9X-ray2.30A/B1-387[»]
2CX9X-ray2.00A/B/C/D1-387[»]
2D29X-ray1.65A/B1-387[»]
ProteinModelPortalQ5SGZ2.
SMRQ5SGZ2. Positions 2-387.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5SGZ2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3168367.
GenomeReviewsGene locus TTHA1938 in contig AP008226_GR.
KEGGttj:TTHA1938.
NMPDRfig|300852.3.peg.1616.
PATRIC23958855. VBITheThe93045_1909.

Phylogenomic databases

eggNOGCOG1960.
HOGENOMHBG699365.
OMAYPVERYW.
ProtClustDBCLSK445125.

Enzyme and pathway databases

BioCycTTHE300852:TTHA1938-MONOMER.

Family and domain databases

InterProIPR006089. Acyl-CoA_DH_CS.
IPR006092. Acyl-CoA_DH_N.
IPR006090. Acyl-CoA_Oxase/DH_1.
IPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase.
[Graphical view]
Gene3DG3DSA:2.40.110.10. Acyl_CoA_DH/ox_M. 1 hit.
G3DSA:1.10.540.10. AcylCoA_DH/ox_N. 1 hit.
G3DSA:1.20.140.10. AcylCoA_DH_1/2_C. 1 hit.
PfamPF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
SUPFAMSSF56645. AcylCoA_dehyd_NM. 1 hit.
SSF47203. AcylCoADH_C_like. 1 hit.
PROSITEPS00072. ACYL_COA_DH_1. 1 hit.
PS00073. ACYL_COA_DH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5SGZ2_THET8
AccessionPrimary (citable) accession number: Q5SGZ2
Entry history
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: December 14, 2011
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info