Q5RLJ3 (Q5RLJ3_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
LIM homeobox protein 4 EMBL AAV67806.1

Gene names

Name:

LHX4 EMBL AAV67806.1

Organism

Homo sapiens (Human) EMBL AAV67806.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	67 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 LIM zinc-binding domain. RuleBase RU000350

Ontologies

Keywords
Domain	Homeobox EMBL AAV67806.1 LIM domain RuleBase RU000350 SAAS SAAS001781
Ligand	Metal-binding Zinc
Gene Ontology (GO)
Biological_process	medial motor column neuron differentiation Inferred from electronic annotation. Source: Compara motor neuron axon guidance Inferred from electronic annotation. Source: Compara negative regulation of apoptotic process Inferred from electronic annotation. Source: Compara organ morphogenesis Inferred from electronic annotation. Source: Compara placenta development Inferred from electronic annotation. Source: Compara
Cellular_component	intracellular Inferred from electronic annotation. Source: Compara
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAV67806.1
	Non-terminal residue	67	1	EMBL AAV67806.1

Sequences

	Sequence		Length	Mass (Da)
	Q5RLJ3 [UniParc]. Last modified December 21, 2004. Version 1. Checksum: C78AD4C47881848C	FASTA	67	7,704
	10 20 30 40 50 60 RFGTKCTACQ QGIPPTQVVR KAQDFVYHLH CFACIICNRQ LATGDEFYLM EDGRLVCKED YETAKQN

References

[1]	"Allelic variation in exon 3 of the LHX4 gene." Melo M.E., Knoepfelmacher M., Arnhold I.J.P., Marui S., Mendonca B.B. Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY817172 Genomic DNA. Translation: AAV67806.1.
IPI	IPI00169275.
UniGene	Hs.658487.
3D structure databases
ProteinModelPortal	Q5RLJ3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5RLJ3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Gene expression databases
ArrayExpress	Q5RLJ3.
Bgee	Q5RLJ3.
Family and domain databases
Gene3D	2.10.110.10. 1 hit.
InterPro	IPR001781. Znf_LIM. [Graphical view]
Pfam	PF00412. LIM. 1 hit. [Graphical view]
SMART	SM00132. LIM. 1 hit. [Graphical view]
PROSITE	PS00478. LIM_DOMAIN_1. 1 hit. PS50023. LIM_DOMAIN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5RLJ3_HUMAN

Accession

Primary (citable) accession number: Q5RLJ3

Entry history

Integrated into UniProtKB/TrEMBL:	December 21, 2004
Last sequence update:	December 21, 2004
Last modified:	April 3, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.