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Protein
Submitted name:

Sox3 protein

Gene

Sox3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi143 – 211HMG boxPROSITE-ProRule annotationAdd BLAST69

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Sox3 proteinImported
Gene namesi
Name:Sox3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:98365. Sox3.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

PTM / Processingi

Proteomic databases

PaxDbiQ5RKW0.

Expressioni

Gene expression databases

GenevisibleiQ5RKW0. MM.

Structurei

3D structure databases

ProteinModelPortaliQ5RKW0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini143 – 211HMG box DNA-bindingInterPro annotationAdd BLAST69

Phylogenomic databases

eggNOGiKOG0527. Eukaryota.
ENOG4111FVF. LUCA.
HOVERGENiHBG105663.
KOiK09267.
OMAiHQHYQSA.

Family and domain databases

Gene3Di1.10.30.10. 1 hit.
InterProiView protein in InterPro
IPR009071. HMG_box_dom.
IPR022097. SOX_fam.
PfamiView protein in Pfam
PF00505. HMG_box. 1 hit.
PF12336. SOXp. 1 hit.
SMARTiView protein in SMART
SM00398. HMG. 1 hit.
SUPFAMiSSF47095. SSF47095. 1 hit.
PROSITEiView protein in PROSITE
PS50118. HMG_BOX_2. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q5RKW0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
RPARENASGE RSPRVPADFA RSPSASLPFP PELPARRPLS TTPTESPGLF
60 70 80 90 100
TVAAPAPGAP SPPATLAHLL PAPAMYSLLE TELKNPVGPP TPAAGTGVPA
110 120 130 140 150
APGAAGKSGA NPAGGANAGN GGSGGANGGG GGGGGGGSDQ DRVKRPMNAF
160 170 180 190 200
MVWSRGQRRK MALENPKMHN SEISKRLGAD WKLLTDAEKR PFIDEAKRLR
210 220 230 240 250
AVHMKEYPDY KYRPRRKTKT LLKKDKYSLP GGLLPPGAAA AAAAAAAAAA
260 270 280 290 300
ASSPVGVGQR LDTYTHVNGW ANGAYSLVQE QLGYAQPPSM SSPPPPPALP
310 320 330 340 350
QMHRYDMAGL QYSPMMPPGA QSYMNAAAAA AAASGYGGMA PSAAAAAAAA
360 370 380 390 400
YGQQPATAAA AAAAAAAMSL GPMGSVVKSE PSSPPPAIAS HSQRACLGDL
410 420 430 440
RDMISMYLPP GGDAADAASP LPGGRLHGVH QHYQGAGTAV NGTVPLTHI
Length:449
Mass (Da):45,313
Last modified:December 21, 2004 - v1
Checksum:iB5386A3572C84DA7
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC052024 mRNA. Translation: AAH52024.1.
RefSeqiNP_033263.2. NM_009237.2.
UniGeneiMm.35784.

Genome annotation databases

GeneIDi20675.
KEGGimmu:20675.

Similar proteinsi

Entry informationi

Entry nameiQ5RKW0_MOUSE
AccessioniPrimary (citable) accession number: Q5RKW0
Entry historyiIntegrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: August 30, 2017
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)