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Q5RKH9

- Q5RKH9_RAT

UniProt

Q5RKH9 - Q5RKH9_RAT

Protein
Submitted name:

Der1-like domain family, member 1

Gene

Derl1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (21 Dec 2004)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Der1-like domain family, member 1Imported
    Submitted name:
    RCG59470, isoform CRA_aImported
    Gene namesi
    Name:Derl1Imported
    Synonyms:RGD1311835Imported
    ORF Names:rCG_59470Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi1311835. Derl1.

    Expressioni

    Gene expression databases

    GenevestigatoriQ5RKH9.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000007484.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG5291.
    HOGENOMiHOG000200949.
    HOVERGENiHBG105143.
    InParanoidiQ5RKH9.
    KOiK11519.
    TreeFamiTF354297.

    Family and domain databases

    InterProiIPR007599. DER1.
    [Graphical view]
    PANTHERiPTHR11009. PTHR11009. 1 hit.
    PfamiPF04511. DER1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5RKH9-1 [UniParc]FASTAAdd to Basket

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    MSDIGDWFRS IPAITRYWFA ATVAVPLIGK LGIISPAYFF LWPEAFLYRF    50
    QIWRPFTATF YFPVGPGTGF LYLVNLYFLY QYSTRLEAGA FDGRPADYLF 100
    MLLFNWICIV ITGLAMDMQL LMIPLIMSVL YVWAQLNRDL IVSFWFGTRF 150
    KACYLPWVIL GFNYIIGGSV INELIGNLVG HLYFFLMFRY PMDLGGRNFL 200
    STPQFLYRWL PSRRGGVSGF GVPPASMRRA ADQNGGGGRH NWGQGFRLGD 250
    Q 251
    Length:251
    Mass (Da):28,835
    Last modified:December 21, 2004 - v1
    Checksum:i2E1B79DEAFD3FDC8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC085877 mRNA. Translation: AAH85877.1.
    CH473950 Genomic DNA. Translation: EDM16237.1.
    RefSeqiNP_001014224.1. NM_001014202.1.
    UniGeneiRn.110990.

    Genome annotation databases

    GeneIDi362912.
    KEGGirno:362912.
    UCSCiRGD:1311835. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC085877 mRNA. Translation: AAH85877.1 .
    CH473950 Genomic DNA. Translation: EDM16237.1 .
    RefSeqi NP_001014224.1. NM_001014202.1.
    UniGenei Rn.110990.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000007484.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 362912.
    KEGGi rno:362912.
    UCSCi RGD:1311835. rat.

    Organism-specific databases

    CTDi 79139.
    RGDi 1311835. Derl1.

    Phylogenomic databases

    eggNOGi COG5291.
    HOGENOMi HOG000200949.
    HOVERGENi HBG105143.
    InParanoidi Q5RKH9.
    KOi K11519.
    TreeFami TF354297.

    Miscellaneous databases

    NextBioi 681760.
    PROi Q5RKH9.

    Gene expression databases

    Genevestigatori Q5RKH9.

    Family and domain databases

    InterProi IPR007599. DER1.
    [Graphical view ]
    PANTHERi PTHR11009. PTHR11009. 1 hit.
    Pfami PF04511. DER1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: HeartImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.

    Entry informationi

    Entry nameiQ5RKH9_RAT
    AccessioniPrimary (citable) accession number: Q5RKH9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 21, 2004
    Last sequence update: December 21, 2004
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)