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Protein

Normal mucosa of esophagus-specific gene 1 protein

Gene

Nmes1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Normal mucosa of esophagus-specific gene 1 protein
Gene namesi
Name:Nmes1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi1359583. MGC105649.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8383Normal mucosa of esophagus-specific gene 1 proteinPRO_0000245771Add
BLAST

Proteomic databases

PaxDbiQ5RK28.
PRIDEiQ5RK28.

Family & Domainsi

Sequence similaritiesi

Belongs to the complex I NDUFA4 subunit family.Curated

Phylogenomic databases

eggNOGiENOG410J1F7. Eukaryota.
ENOG410YXE9. LUCA.
HOGENOMiHOG000261679.
HOVERGENiHBG052639.
InParanoidiQ5RK28.
PhylomeDBiQ5RK28.

Family and domain databases

InterProiIPR010530. B12D.
[Graphical view]
PANTHERiPTHR14256. PTHR14256. 1 hit.
PfamiPF06522. B12D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5RK28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIFQRLMKN KELIPLAFFI SAAATGASSF ALYALKKTDV VIDRKRNPEP
60 70 80
WETVDPTQPQ KLLTINQEWK PVEELQRVRR ATR
Length:83
Mass (Da):9,598
Last modified:December 21, 2004 - v1
Checksum:iD4C56678F7740B43
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC086337 mRNA. Translation: AAH86337.1.
RefSeqiNP_001008518.1. NM_001008518.2.
UniGeneiRn.106101.

Genome annotation databases

GeneIDi302884.
KEGGirno:302884.
UCSCiRGD:1359583. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC086337 mRNA. Translation: AAH86337.1.
RefSeqiNP_001008518.1. NM_001008518.2.
UniGeneiRn.106101.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ5RK28.
PRIDEiQ5RK28.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi302884.
KEGGirno:302884.
UCSCiRGD:1359583. rat.

Organism-specific databases

RGDi1359583. MGC105649.

Phylogenomic databases

eggNOGiENOG410J1F7. Eukaryota.
ENOG410YXE9. LUCA.
HOGENOMiHOG000261679.
HOVERGENiHBG052639.
InParanoidiQ5RK28.
PhylomeDBiQ5RK28.

Miscellaneous databases

NextBioi650285.
PROiQ5RK28.

Family and domain databases

InterProiIPR010530. B12D.
[Graphical view]
PANTHERiPTHR14256. PTHR14256. 1 hit.
PfamiPF06522. B12D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Ovary.

Entry informationi

Entry nameiNMES1_RAT
AccessioniPrimary (citable) accession number: Q5RK28
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 11, 2006
Last sequence update: December 21, 2004
Last modified: November 11, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.