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Protein

Ashwin

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Ashwin
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 9

Organism-specific databases

RGDi1310553. RGD1310553.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 232232AshwinPRO_0000268861Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei112 – 1121PhosphoserineBy similarity
Modified residuei182 – 1821PhosphoserineBy similarity
Modified residuei184 – 1841PhosphoserineBy similarity
Modified residuei189 – 1891PhosphoserineCombined sources
Modified residuei193 – 1931PhosphoserineCombined sources
Modified residuei197 – 1971PhosphothreonineBy similarity
Modified residuei198 – 1981PhosphothreonineBy similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ5RJT0.
PRIDEiQ5RJT0.

PTM databases

iPTMnetiQ5RJT0.
PhosphoSiteiQ5RJT0.

Expressioni

Gene expression databases

GenevisibleiQ5RJT0. RN.

Interactioni

Subunit structurei

Component of the tRNA-splicing ligase complex.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022601.

Family & Domainsi

Sequence similaritiesi

Belongs to the ashwin family.Curated

Phylogenomic databases

eggNOGiENOG410IGF7. Eukaryota.
ENOG4111XKJ. LUCA.
GeneTreeiENSGT00390000007488.
HOGENOMiHOG000034099.
HOVERGENiHBG080774.
InParanoidiQ5RJT0.
KOiK15432.
OMAiDLYIQHA.
OrthoDBiEOG7M3J1X.
PhylomeDBiQ5RJT0.
TreeFamiTF332084.

Family and domain databases

InterProiIPR024887. Ashwin.
[Graphical view]
PfamiPF15323. Ashwin. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5RJT0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGDVGGRSC TDAELLLHPE LLSQEFLLLT LEQKNIAVEN DVRVNKDNLT
60 70 80 90 100
DLYVQHAIPL PQRDLPKNRW GKMMEKKREH HEGKNDTKRG SAVDGLRKRP
110 120 130 140 150
LIVFDGSSTS TSIKVKKTEN GADDRLKPPA QTGSTSDSLR KSPNSSSRIA
160 170 180 190 200
PLVLYSSLPM NNKMEHNNND TKQNHDLTHR KSPSGPVKSP PLSPVGTTPV
210 220 230
KLKRAAPKEE AEATNHLKPP EAKRKIQHVT WP
Length:232
Mass (Da):25,787
Last modified:December 21, 2004 - v1
Checksum:i031D5825145303D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC086514 mRNA. Translation: AAH86514.1.
RefSeqiNP_001008517.1. NM_001008517.1.
UniGeneiRn.12996.

Genome annotation databases

EnsembliENSRNOT00000022601; ENSRNOP00000022601; ENSRNOG00000016447.
GeneIDi301374.
KEGGirno:301374.
UCSCiRGD:1310553. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC086514 mRNA. Translation: AAH86514.1.
RefSeqiNP_001008517.1. NM_001008517.1.
UniGeneiRn.12996.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022601.

PTM databases

iPTMnetiQ5RJT0.
PhosphoSiteiQ5RJT0.

Proteomic databases

PaxDbiQ5RJT0.
PRIDEiQ5RJT0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000022601; ENSRNOP00000022601; ENSRNOG00000016447.
GeneIDi301374.
KEGGirno:301374.
UCSCiRGD:1310553. rat.

Organism-specific databases

CTDi301374.
RGDi1310553. RGD1310553.

Phylogenomic databases

eggNOGiENOG410IGF7. Eukaryota.
ENOG4111XKJ. LUCA.
GeneTreeiENSGT00390000007488.
HOGENOMiHOG000034099.
HOVERGENiHBG080774.
InParanoidiQ5RJT0.
KOiK15432.
OMAiDLYIQHA.
OrthoDBiEOG7M3J1X.
PhylomeDBiQ5RJT0.
TreeFamiTF332084.

Miscellaneous databases

PROiQ5RJT0.

Gene expression databases

GenevisibleiQ5RJT0. RN.

Family and domain databases

InterProiIPR024887. Ashwin.
[Graphical view]
PfamiPF15323. Ashwin. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  2. "Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues."
    Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C., Olsen J.V.
    Nat. Commun. 3:876-876(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-189 AND SER-193, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiASHWN_RAT
AccessioniPrimary (citable) accession number: Q5RJT0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: December 21, 2004
Last modified: July 6, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.