Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Translocated promoter region b, nuclear basket protein

Gene

tprb

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Translocated promoter region b, nuclear basket proteinImported
Gene namesi
Name:tprbImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 20

Organism-specific databases

ZFINiZDB-GENE-030131-6410 tprb

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiQ5RI09
PRIDEiQ5RI09

Expressioni

Gene expression databases

BgeeiENSDARG00000016630

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000019846

Structurei

3D structure databases

ProteinModelPortaliQ5RI09
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1041 – 1168TPR_MLP1_2InterPro annotationAdd BLAST128

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili22 – 49Sequence analysisAdd BLAST28
Coiled coili75 – 172Sequence analysisAdd BLAST98
Coiled coili219 – 281Sequence analysisAdd BLAST63
Coiled coili293 – 366Sequence analysisAdd BLAST74
Coiled coili429 – 515Sequence analysisAdd BLAST87
Coiled coili546 – 573Sequence analysisAdd BLAST28
Coiled coili579 – 606Sequence analysisAdd BLAST28
Coiled coili695 – 764Sequence analysisAdd BLAST70
Coiled coili772 – 806Sequence analysisAdd BLAST35
Coiled coili832 – 873Sequence analysisAdd BLAST42
Coiled coili882 – 919Sequence analysisAdd BLAST38
Coiled coili929 – 970Sequence analysisAdd BLAST42
Coiled coili982 – 1081Sequence analysisAdd BLAST100
Coiled coili1098 – 1118Sequence analysisAdd BLAST21
Coiled coili1151 – 1171Sequence analysisAdd BLAST21
Coiled coili1224 – 1251Sequence analysisAdd BLAST28
Coiled coili1272 – 1306Sequence analysisAdd BLAST35
Coiled coili1314 – 1341Sequence analysisAdd BLAST28
Coiled coili1357 – 1377Sequence analysisAdd BLAST21
Coiled coili1392 – 1419Sequence analysisAdd BLAST28
Coiled coili1470 – 1556Sequence analysisAdd BLAST87
Coiled coili1568 – 1627Sequence analysisAdd BLAST60
Coiled coili1952 – 1991Sequence analysisAdd BLAST40

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4674 Eukaryota
ENOG410XSA1 LUCA
GeneTreeiENSGT00730000111014
HOGENOMiHOG000139431
HOVERGENiHBG009158
InParanoidiQ5RI09
KOiK09291
OMAiSSWLKFG
OrthoDBiEOG091G006U
PhylomeDBiQ5RI09
TreeFamiTF350364

Family and domain databases

InterProiView protein in InterPro
IPR012929 TPR/MLP1
PfamiView protein in Pfam
PF07926 TPR_MLP1_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q5RI09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAVLQQILE RSEISKLQKT VLTKLEKYIS EQQCEVDDLK AQQEQFRVDS
60 70 80 90 100
EQQYFDIEKK FAESQAQFVS QTQEHQILKE EHYKLEDELK CLRENNKEQA
110 120 130 140 150
ASYAKLESKQ NDLSKAKDEL EAEKRELVRT LERRSQEMEH QSEDLKRLND
160 170 180 190 200
RLVEVSAEKM QLQLKLEESE TSEVSIKYKE KRMEQEKDLL QSQVTWLNTE
210 220 230 240 250
LKAKSEELLS LSRQRGNEIL ELQCNLNNKE DEITRLQDQV TSLKASNETF
260 270 280 290 300
QKQAEEMIIK MREAKEQQAA LEEKFSNELN ANIKLSNLYK GAAADAEAKS
310 320 330 340 350
EELSRAVDEL HKLLKEAGEA HKDLEVKMAD LESHKNKEIA ELKEKISSQE
360 370 380 390 400
KELDNANDLL SDSRHRGAAS ILTEEQVTIM SPTAAAVAKM IKPGMKLTEI
410 420 430 440 450
YTAYVETQEH LQREKLENKR LHKYLDDIVQ EMEAKAPILK RQREEYERMQ
460 470 480 490 500
KSVSSLSAKL EQAVTEVHRL QKESDESNKR ASVLERDNQR FEVQLADMAQ
510 520 530 540 550
QVRVLLVELE EARGNHVMRE DDDVGSADVS STSEVISQHL VTFRSVEELQ
560 570 580 590 600
QQNQRLLVAL RDLSEEKEKD ELEGDTMKRS EVEKYLEELQ RELEQLKEKR
610 620 630 640 650
TQDLQKVDTV ARQRDMFRML LTQTTGVTFP QGAGAEELML TSTPRRSPAV
660 670 680 690 700
TPTTGTPTAL VATAIESTES VEAKAALKQL QEVFVAYKKE KIESEKAQIE
710 720 730 740 750
QNEKLQDQVT ELRSENMKIS TQLEFTSKRY EMLQDNVEGY RKDIASLNEK
760 770 780 790 800
LQKQAAAIQQ SEQTTHTLTQ DLQAAAEKLS IAESELENLR KERDMLKLVE
810 820 830 840 850
IRLTQEKESF QAQQLGQNML LTNLKSIQTT LERSETETRQ RLTAQIEKQE
860 870 880 890 900
REITQLQKRL ENEVEQKHLL ARNQDVQLMD TKKQLEAQIA QHHKTKEQLS
910 920 930 940 950
AAQLELTNLR LQLNSGESRL ASAAVHTGLQ GSERDMEVLR AQIRQTENRI
960 970 980 990 1000
EELTERLKNT TASMEQYKAM SLSLEESLDK EKQVTEQVRS SVENQVEAAQ
1010 1020 1030 1040 1050
EQYKRLEQKL LEMDKEKQNL LEEKNKAVAA VEQELTELRK SLSSVQAELQ
1060 1070 1080 1090 1100
SAQEKAAVAA AQEQQALLDG QEQAKMAAEA QDKYEREMLL HAADVEALQA
1110 1120 1130 1140 1150
AKAQAQQASL VRQQLEEKVQ ITSAQLLEAR VSWEEQEKIL KEEQCKIQSR
1160 1170 1180 1190 1200
CENLQRQNKL LHEQIQTLSG QMASQLKRAT TESPLNVSLT EEGKSQEQLL
1210 1220 1230 1240 1250
EILRFVRREK EIAESRFEVV QGESLRHRLR VEHLERELKD MQESLNAERE
1260 1270 1280 1290 1300
RMQVTAKTLA QHDELMKKTE TMNVLMETNK MLREEKEKLE KELQDTQAKI
1310 1320 1330 1340 1350
RKLESDIMPV QESNSELSEK SGMLQAEKKL LEEDIKRWKA RTQHLVSQQK
1360 1370 1380 1390 1400
DTDPEEYKRL HSEREAHLKR IQQLVEETGR LKADAARSSG SLTTLQSQVQ
1410 1420 1430 1440 1450
NLRENLGKVM VERDNLKKDQ EAKILDIQEK IKTITQVKKI GRRYKTQYEE
1460 1470 1480 1490 1500
LKVEYEKLVA AAASAPAQDQ EAQQASAQEL QNLKESLNQS ETRIRELEGQ
1510 1520 1530 1540 1550
LENLNRTVGE REMEARSAQE QASRLQTELT RLRQELQEKS SQEERLKQQL
1560 1570 1580 1590 1600
TEKEERTKKA ILLAKQKISQ LTGIKGQFQK ENEELKQQKE ELEVRVSALK
1610 1620 1630 1640 1650
SQYEGRLSRQ ERELRDLREQ QERHGEQRDE PQEQGSSKTQ EPQRTTEQRQ
1660 1670 1680 1690 1700
ISLKTTPAAE RGSASTSEPP TANIKPTPLA ATPSKPQVIP GNKSTPRASI
1710 1720 1730 1740 1750
KPMITPAPVP TPTPTATVMP TTQVESQEPM QSSESPLEHV TVYGSASGSV
1760 1770 1780 1790 1800
RSTSPNVQTT LAQPLLNVQQ QNQATAFIQP TQQQTQPPAE PSNQEPPAAL
1810 1820 1830 1840 1850
MLPTSQLDRP LSTSTGLWSA TPSTSSASAV SASPGSALSK RPREEEQESM
1860 1870 1880 1890 1900
SADTQSQDEP NDSPTCKRLR IHRVGLEEEM LAEDSTEAES VVPGEIQEAP
1910 1920 1930 1940 1950
DAGQELENYS TLEEMDEEPG PSQSVPGDRM LPHPSETHRS PEEPDHHVIV
1960 1970 1980 1990 2000
IVSDTESEGE QEEESEEEEE EEEEEQDYEE EDEEEEEEDD DDDEEDGGIG
2010 2020 2030 2040 2050
EEGDESNEES RDDNEAYEGD DTEGPDPTDP GTETEESLGA TDSTQRMADS
2060 2070 2080 2090 2100
QSFESNTLEM FEVPVTSSAP RPPQSPRRPQ HPLPPRLNIL AAPAQELGPP
2110 2120 2130 2140 2150
AQVQRLPARR QSVGRGLQLA SGMASSAQPF FEDDDRMVPS TPTLPLRSDG
2160 2170 2180 2190 2200
FAEAIHSPQV AGVPRFRFGL LDELPQTSSS HSDLSQLPSQ GLGMYESSVF
2210 2220 2230 2240 2250
LGSHEDESGG RSVPTTPLQI SAPVTILSEA AVSEASEHAS QSVPMVSTST
2260 2270 2280 2290 2300
PGLSAPAVEE RDDMFLDAGD SAEASLEAVS QTEAEEAAQP SDDANLPSTS
2310 2320 2330 2340 2350
QEPSSSSADT SSSQPPKARS GSGRQWTGSR GSRSIVKRDG LSVMGVRGRF

AR
Length:2,352
Mass (Da):265,981
Last modified:December 21, 2004 - v1
Checksum:iD05C4EFFE1128374
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX323056 Genomic DNA No translation available.
RefSeqiNP_001025294.1, NM_001030123.1
UniGeneiDr.52426

Genome annotation databases

EnsembliENSDART00000017941; ENSDARP00000019846; ENSDARG00000016630
GeneIDi558883
KEGGidre:558883

Similar proteinsi

Entry informationi

Entry nameiQ5RI09_DANRE
AccessioniPrimary (citable) accession number: Q5RI09
Entry historyiIntegrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: March 28, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health