Q5RI06 (Q5RI06_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Prostaglandin G/H synthase 2b EMBL ABF50051.1

Submitted name:
Prostaglandin-endoperoxide synthase 2b EMBL AAI39569.1
Submitted name:
Uncharacterized protein Ensembl ENSDARP00000003684

Gene names

Name:	ptgs2b ZFIN ZDB-GENE-041014-323 Ensembl ENSDARP00000003684
Synonyms:	si:dkey-97o5.6 ZFIN ZDB-GENE-041014-323

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome] Ensembl ENSDARP00000003684

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	606 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	response to chemical stimulus Inferred from direct assay Ref.1. Source: ZFIN response to oxidative stress Inferred from electronic annotation. Source: InterPro
Molecular_function	heme binding Inferred from electronic annotation. Source: InterPro peroxidase activity Inferred from direct assay Ref.1. Source: ZFIN
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5RI06 [UniParc]. Last modified December 21, 2004. Version 1. Checksum: C0601EA49A06EA6A	FASTA	606	69,465
	10 20 30 40 50 60 MKSSVLFIFL LLGFVVCTGA NPCCSHPCQN RGVCTEMGSD AYECDCTRTG YYGQNCTTPE 70 80 90 100 110 120 FLTWVKVSLK PSPNTVHYIL THFKSLWNII NNVSFLRNGI MRYVLTSRAH LIDSPPTFNA 130 140 150 160 170 180 DYGYKSWEAY SNLSYYTRTL PPVPRDCPTP MGVAGKKELP DVKMLAEKLL LRRKFIPDPQ 190 200 210 220 230 240 RTNLMFAFFA QHFTHQFFKS DMKKGPAFTT ALNHGVDLAH IYGQNLDRQH KLRLFKDGKL 250 260 270 280 290 300 RYQILDGEVY PPTVSEVQVD MHYPPHVPES RRFAVGHEAF GLVPGLMMYA TIWLREHNRV 310 320 330 340 350 360 CDILKQEHPD WDDERLFQTS RLILIGETIK IVIEDYVQHL SGYYFKLKFD PELLFNERFQ 370 380 390 400 410 420 YQNRISSEFN TLYHWHPLMP DDFHIQDEVY NYQQFLFNTS ILTDYGVNSL VESFNKQIAG 430 440 450 460 470 480 RVAGGRNVAP AVLRVAIKSI ENSRQMRYQS INAYRKRFNM KPYRSFEEMT GEKEMAAELE 490 500 510 520 530 540 EMYGDVDAVE LYAGLLVEKP RSNAIFGETM VEMGAPYSLK GLMGNPICSP EYWKPSTFGG 550 560 570 580 590 600 KVGFEIVNSA SLQNLVCNNV NGPCPMASFY VPNVKDSLPT TINASTSQSD RNVNPTVLLK ERTSEL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The zebrafish genome contains two inducible, functional cyclooxygenase-2 genes." Ishikawa T., Griffin K.J.P., Banerjee U., Herschman H.R. Biochem. Biophys. Res. Commun. 352:181-187(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: Singapore local strain EMBL AAI39569.1. Tissue: Embryo EMBL AAI39569.1.
[3]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000003684.
[4]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000003684.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX323056 Genomic DNA. No translation available. BC139568 mRNA. Translation: AAI39569.1. DQ494791 mRNA. Translation: ABF50051.1.
IPI	IPI00495837.
RefSeq	NP_001020675.1. NM_001025504.2.
UniGene	Dr.48719.
3D structure databases
SMR	Q5RI06. Positions 20-571.
ModBase	Search...
Protein-protein interaction databases
STRING	7955.ENSDARP00000003684.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000010028; ENSDARP00000003684; ENSDARG00000010276.
GeneID	559020.
KEGG	dre:559020.
Organism-specific databases
CTD	559020.
ZFIN	ZDB-GENE-041014-323. ptgs2b.
Phylogenomic databases
eggNOG	NOG39991.
GeneTree	ENSGT00390000010743.
HOGENOM	HOG000013149.
HOVERGEN	HBG000366.
InParanoid	Q5RI06.
KO	K11987.
OMA	THFKGVW.
OrthoDB	EOG4H19VF.
Family and domain databases
Gene3D	1.10.640.10. 1 hit.
InterPro	IPR000742. EG-like_dom. IPR010255. Haem_peroxidase. IPR002007. Haem_peroxidase_animal. IPR019791. Haem_peroxidase_animal_subgr. [Graphical view]
Pfam	PF03098. An_peroxidase. 2 hits. [Graphical view]
PRINTS	PR00457. ANPEROXIDASE.
SUPFAM	SSF48113. Peroxidase_super. 1 hit.
PROSITE	PS50026. EGF_3. 1 hit. PS50292. PEROXIDASE_3. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20882745.

Entry information

Entry name

Q5RI06_DANRE

Accession

Primary (citable) accession number: Q5RI06

Entry history

Integrated into UniProtKB/TrEMBL:	December 21, 2004
Last sequence update:	December 21, 2004
Last modified:	April 3, 2013
This is version 77 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)