Q5RI00 (Q5RI00_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Novel protein similar to vertebrate UDP-N-acetyl-alpha-D-galactosamine polypeptide N-acetylgalactosaminyltransferase family EMBL CAI11789.1

Gene names

Name:	galnt8b ZFIN ZDB-GENE-041210-84
Synonyms:	si:ch211-214j24.3 ZFIN ZDB-GENE-041210-84
ORF Names:	CH211-214J24.3-001 EMBL CAI11789.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL CAI11789.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	462 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Calcium By similarity. SAAS SAAS001173 Manganese By similarity. SAAS SAAS001173
Pathway	Protein modification; protein glycosylation. SAAS SAAS001173
Sequence similarities	Contains 1 ricin B-type lectin domain. SAAS SAAS001173

Ontologies

Keywords
Cellular component	Golgi apparatus SAAS SAAS001173 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS001173
Ligand	Calcium SAAS SAAS001173 Lectin SAAS SAAS001173 Manganese SAAS SAAS001173
Molecular function	Glycosyltransferase SAAS SAAS000772 RuleBase RU003687 Transferase
PTM	Disulfide bond SAAS SAAS001173
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL CAI11789.1

Sequences

	Sequence		Length	Mass (Da)
	Q5RI00 [UniParc]. Last modified December 21, 2004. Version 1. Checksum: B6B0F6047DFC09EC	FASTA	462	52,997
	10 20 30 40 50 60 CAEREYPPDL PTVSVVLIYL DEALSVIQRA VYSIINRTPA HLLKEIILVD DHSTNEDLQT 70 80 90 100 110 120 QLHVYISSIN EKHPGLVKMV THAEQKGLSQ ARISGWKAAS GDVVAILDAH IEVHVKWAEP 130 140 150 160 170 180 LLARIQADRT LVLSPVFDKI NYDDLEVTKY IASAHGFDWA LWCMYVTFPE KWYNQNDPSL 190 200 210 220 230 240 PGKSPSVMGI LVVDRLFFGE IGTLDEGMQV YGGENVELGI RVWLCGGSIE VVPCSKIAHI 250 260 270 280 290 300 ERAHKPYMPD LSNVMKRNAL RVAEVWMDEY KKNVYMAWGL PMQNHGIDIG DLSERKKLRE 310 320 330 340 350 360 RLNCKRFKWY LENVYNLLNP MDDLLGYGSL INDLQTSLCL DKGPSEENTP ILYPCHFLIS 370 380 390 400 410 420 QQFFYTTSGE ILVGPLQPLL HSRNRCLADP GSGRFPEFSW CSDTEKPKHM YWDFKQGQAI 430 440 450 460 QNRDTKRCLE ISTKQTGDYK NNVFIQQCRN QHWRIQHAIR DF

References

[1]	Pelan S. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX323558 Genomic DNA. Translation: CAI11789.1.
IPI	IPI01016729.
UniGene	Dr.114613.
3D structure databases
ProteinModelPortal	Q5RI00.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5RI00.
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
ZFIN	ZDB-GENE-041210-84. galnt8b.
Phylogenomic databases
eggNOG	fiNOG06531.
GeneTree	ENSGT00560000076662.
HOGENOM	HBG715048.
HOVERGEN	HBG051699.
InParanoid	Q5RI00.
OrthoDB	EOG4DNF4F.
PhylomeDB	Q5RI00.
Gene expression databases
Bgee	Q5RI00.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
SUPFAM	SSF50370. RicinB_like. 1 hit.
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5RI00_DANRE

Accession

Primary (citable) accession number: Q5RI00

Entry history

Integrated into UniProtKB/TrEMBL:	December 21, 2004
Last sequence update:	December 21, 2004
Last modified:	January 25, 2012
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)