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Q5RGV8 (Q5RGV8_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Novel protein similar to vertebrate mitochondrial malonyl-CoA:acyl carrier protein transacylase EMBL CAI21143.1
Gene names
Name:mcat ZFIN ZDB-GENE-041111-231 Ensembl ENSDARP00000005503
Synonyms:si:dkey-31f5.5 ZFIN ZDB-GENE-041111-231
ORF Names:DKEY-31F5.5-001 EMBL CAI21143.1
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL CAI21143.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length364 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionbinding

Inferred from electronic annotation. Source: InterPro

transferase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5RGV8 [UniParc].

Last modified December 21, 2004. Version 1.
Checksum: 99DAAF725F340FFD

FASTA36440,479
        10         20         30         40         50         60 
MNLSVTLRSY SRARVCRNKA TVSVYRRLSD APEEPQSVKI RRAPGNATIL LFPGQGSQFV 

        70         80         90        100        110        120 
GMGRGLLKYG NVKEMFSVAQ KVLGYDLLSL CLNGPEKDLM KTVHCQPAVF VCSLAAVERL 

       130        140        150        160        170        180 
NHENPAAIES CVSAVGFSVG EFAALVFSGA MNFAEALFAV KVRAEAMQKA SDQVSSGMLS 

       190        200        210        220        230        240 
VIGRPQAHYK HACVRAREHC VSLGIQDPVC SVANYLFPDG RVIAGHKEAL DFLQERSKEL 

       250        260        270        280        290        300 
NFMRTRLLPV SGAFHTSLME AAVEPLRDVL RKIEVRRPEI SVHSNVDGKR YMHDKHIRNQ 

       310        320        330        340        350        360 
LAKQLVSPVK WEQTLHEIYQ RAQGQEFPHT YEVGPGRHLG SMLQKCNMKA FKNYTHVDVA 


LAED 

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References

« Hide 'large scale' references
[1]Lovell J.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The genomic sequence of Danio rerio."
The Danio rerio Sequencing Project at the Sanger Institute
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000005503.
[3]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000005503.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX649534 Genomic DNA. Translation: CAI21143.1.
IPIIPI00503169.
RefSeqNP_001038508.1. NM_001045043.1.
UniGeneDr.84100.

3D structure databases

ProteinModelPortalQ5RGV8.
SMRQ5RGV8. Positions 45-359.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5RGV8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000021782; ENSDARP00000005503; ENSDARG00000016613.
GeneID564111.
KEGGdre:564111.

Organism-specific databases

CTD27349.
ZFINZDB-GENE-041111-231. mcat.

Phylogenomic databases

GeneTreeENSGT00390000013715.
HOVERGENHBG051540.
InParanoidQ5RGV8.
OMAFAANYNC.
PhylomeDBQ5RGV8.

Gene expression databases

BgeeQ5RGV8.

Family and domain databases

InterProIPR001227. Ac_transferase_dom.
IPR014043. Acyl_transferase.
IPR016035. Acyl_Trfase/lysoPLipase.
IPR016036. Malonyl_transacylase_ACP-bd.
[Graphical view]
Gene3DG3DSA:3.40.366.10. Ac_transferase_reg. 2 hits.
KOK00645.
PfamPF00698. Acyl_transf_1. 1 hit.
[Graphical view]
SUPFAMSSF52151. Acyl_Trfase/lysoPlipase. 1 hit.
SSF55048. Malonyl_transacylase_ACP-bd. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5RGV8_DANRE
AccessionPrimary (citable) accession number: Q5RGV8
Entry history
Integrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)