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Q5RGN0

- NBPFN_HUMAN

UniProt

Q5RGN0 - NBPFN_HUMAN

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Protein

Putative neuroblastoma breakpoint family member 24

Gene

NBPF24

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative neuroblastoma breakpoint family member 24
Gene namesi
Name:NBPF24
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Unplaced

Organism-specific databases

HGNCiHGNC:27299. NBPF24.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165752039.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 790790Putative neuroblastoma breakpoint family member 24PRO_0000405313Add
BLAST

Proteomic databases

PaxDbiQ5RGN0.
PRIDEiQ5RGN0.

Expressioni

Gene expression databases

BgeeiQ5RGN0.

Interactioni

Protein-protein interaction databases

BioGridi609324. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ5RGN0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini90 – 18495NBPF 1PROSITE-ProRule annotationAdd
BLAST
Domaini361 – 45393NBPF 2PROSITE-ProRule annotationAdd
BLAST
Domaini454 – 54289NBPF 3PROSITE-ProRule annotationAdd
BLAST
Domaini545 – 60056NBPF 4PROSITE-ProRule annotationAdd
BLAST
Domaini601 – 69292NBPF 5PROSITE-ProRule annotationAdd
BLAST
Domaini695 – 79096NBPF 6PROSITE-ProRule annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili14 – 5542Sequence AnalysisAdd
BLAST
Coiled coili264 – 32663Sequence AnalysisAdd
BLAST

Sequence similaritiesi

Belongs to the NBPF family.Curated
Contains 6 NBPF domains.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil, Repeat

Phylogenomic databases

eggNOGibiNOG22098.
HOGENOMiHOG000049041.
HOVERGENiHBG058300.
InParanoidiQ5RGN0.
TreeFamiTF341151.

Family and domain databases

InterProiIPR010630. NBPF_dom.
[Graphical view]
PfamiPF06758. DUF1220. 6 hits.
[Graphical view]
PROSITEiPS51316. NBPF. 6 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5RGN0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFSNSTGRLP GQPTQEIQQY KVLVHSQERE LTQLREKLRE GRDASRSLNE
60 70 80 90 100
HLQALLTPDE PDKSQGQDLQ EQLAEGCRLA QHLVQKLSPE NDEDEDEDVQ
110 120 130 140 150
VEEDEKVLES SAPREVQKAE ESKVPEDSLE ECAITCSNSH GPCDSIQPHK
160 170 180 190 200
NIKITFEEDK VNSSLVVDRE SSHDGCQDAL NILPVPGPTS SATNVSMVVS
210 220 230 240 250
AGPLSSEKAE MNILEINEKL CPQLAEKKQQ FRSLKEKCFV TQVACFLAKQ
260 270 280 290 300
QNKYKYEECK DLIKSMLRNE RQFKEEKLAE QLKQAEELRQ YKVLVHSQER
310 320 330 340 350
ELTQLREKLR EGRDASRSLN EHLQALLTPD EPDKSQGQDL QEQLAEGCRL
360 370 380 390 400
AQHLVQKLSP ENDNDDDEDV QVEVAEKVQK SSSPREMQKA EEKEVPEDSL
410 420 430 440 450
EECAITCSNS HGPYDSNQPH RKTKITFEED KVDSTLIGSS SHVEWEDAVH
460 470 480 490 500
IIPENESDDE EEEEKGPVSP RNLQESEEEE VPQESWDEGY STLSIPPERL
510 520 530 540 550
ASYQSYSSTF HSLEEQQVCM AVDIGRHRWD QVKKEDQEAT GPRLSRELLD
560 570 580 590 600
EKEPEVLQDS LDRCYSTPSV YLGLTDSCQP YRSAFYVLEQ QRIGLAVDMD
610 620 630 640 650
EIEKYQEVEE DQDPSCPRLS RELLAEKEPE VLQDSLDRCY STPSGYLELP
660 670 680 690 700
DLGQPYRSAV YSLEEQYLGL ALDVDRIKKD QEEEEDQGPP CPRLSRELLE
710 720 730 740 750
VVEPEVLQDS LDVIQLLPVV LNSLTPASPT EVPFMHWRKN MLAFLLTWEK
760 770 780 790
LKRRGRGRKE GEEDQRRKEE GEEKKGKKIK THHAPGSAAC
Length:790
Mass (Da):90,230
Last modified:December 21, 2004 - v1
Checksum:iDCC4C07DA3050DA1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX842679 Genomic DNA. Translation: CAI23637.1.
UniGeneiHs.721588.
Hs.730358.
Hs.740943.
Hs.744018.

Genome annotation databases

UCSCiuc001eox.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX842679 Genomic DNA. Translation: CAI23637.1 .
UniGenei Hs.721588.
Hs.730358.
Hs.740943.
Hs.744018.

3D structure databases

ProteinModelPortali Q5RGN0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 609324. 1 interaction.

Proteomic databases

PaxDbi Q5RGN0.
PRIDEi Q5RGN0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi uc001eox.3. human.

Organism-specific databases

GeneCardsi GC01M147576.
HGNCi HGNC:27299. NBPF24.
neXtProti NX_Q5RGN0.
PharmGKBi PA165752039.
GenAtlasi Search...

Phylogenomic databases

eggNOGi biNOG22098.
HOGENOMi HOG000049041.
HOVERGENi HBG058300.
InParanoidi Q5RGN0.
TreeFami TF341151.

Miscellaneous databases

ChiTaRSi NBPF24. human.
NextBioi 13622359.

Gene expression databases

Bgeei Q5RGN0.

Family and domain databases

InterProi IPR010630. NBPF_dom.
[Graphical view ]
Pfami PF06758. DUF1220. 6 hits.
[Graphical view ]
PROSITEi PS51316. NBPF. 6 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiNBPFN_HUMAN
AccessioniPrimary (citable) accession number: Q5RGN0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 8, 2011
Last sequence update: December 21, 2004
Last modified: November 26, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Miscellaneous

Encoded by one of the numerous copies of NBPF genes clustered in the p36, p12 and q21 region of the chromosome 1.

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3