Q5RFV2 (Q5RFV2_DANRE) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 57.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Novel protein similar to human and mouse UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) (GALNT14) EMBL CAI20718.1 Submitted name: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) Ensembl ENSDARP00000036450 | ||||||
| Gene names |
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| Organism | Danio rerio (Zebrafish) (Brachydanio rerio) EMBL CAI20718.1 | ||||||
| Taxonomic identifier | 7955 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio |
Protein attributes
| Sequence length | 554 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Cofactor | Calcium By similarity. SAAS SAAS001173 Manganese By similarity. SAAS SAAS001173 |
| Pathway | Protein modification; protein glycosylation. SAAS SAAS001173 |
| Sequence similarities | Contains 1 ricin B-type lectin domain. SAAS SAAS001173 |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Golgi apparatus SAAS SAAS001173 Membrane |
| Domain | Transmembrane Transmembrane helix SAAS SAAS001173 |
| Ligand | Calcium SAAS SAAS001173 Lectin SAAS SAAS001173 Manganese SAAS SAAS001173 |
| Molecular function | Glycosyltransferase SAAS SAAS000772 RuleBase RU003687 Transferase |
| PTM | Disulfide bond SAAS SAAS001173 |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular component | Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membraneInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groupsInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | Beasley H. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | Hammond S. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000036450. |
| [4] | Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000036450. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BX897693, CR626885 Genomic DNA. Translation: CAI11605.1. CR626885, BX897693 Genomic DNA. Translation: CAI20718.1. |
| IPI | IPI00487701. |
| RefSeq | NP_001038460.1. NM_001044995.2. |
| UniGene | Dr.80214. |
3D structure databases | |
| ProteinModelPortal | Q5RFV2. |
| SMR | Q5RFV2. Positions 56-553. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q5RFV2. |
Protein family/group databases | |
| CAZy | CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENSDART00000032161; ENSDARP00000036450; ENSDARG00000023448. |
| GeneID | 562739. |
| KEGG | dre:562739. |
Organism-specific databases | |
| CTD | 79623. |
| ZFIN | ZDB-GENE-041014-351. galnt14. |
Phylogenomic databases | |
| eggNOG | fiNOG13339. |
| GeneTree | ENSGT00560000076578. |
| HOGENOM | HBG715048. |
| HOVERGEN | HBG051699. |
| InParanoid | Q5RFV2. |
| OMA | LWDQFDE. |
| OrthoDB | EOG483D4C. |
| PhylomeDB | Q5RFV2. |
Gene expression databases | |
| ArrayExpress | Q5RFV2. |
| Bgee | Q5RFV2. |
Family and domain databases | |
| InterPro | IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view] |
| KO | K00710. |
| Pfam | PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view] |
| SMART | SM00458. RICIN. 1 hit. [Graphical view] |
| SUPFAM | SSF50370. RicinB_like. 1 hit. |
| PROSITE | PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q5RFV2_DANRE | ||||||||
| Accession | Primary (citable) accession number: Q5RFV2 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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