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Q5R5V2 (LAMP5_PONAB) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Lysosome-associated membrane glycoprotein 5
Alternative name(s):
Brain and dendritic cell-associated LAMP
Brain-associated LAMP-like protein
Short name=BAD-LAMP
Lysosome-associated membrane protein 5
Short name=LAMP-5
Gene names
Name:LAMP5
OrganismPongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii) [Reference proteome]
Taxonomic identifier9601 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePongo

Protein attributes

Sequence length223 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Post-translational modification

Glycosylated By similarity.

Sequence similarities

Belongs to the LAMP family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential
Chain30 – 223194Lysosome-associated membrane glycoprotein 5
PRO_0000042643

Amino acid modifications

Glycosylation351N-linked (GlcNAc...) Potential
Glycosylation531N-linked (GlcNAc...) Potential
Glycosylation1271N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q5R5V2 [UniParc].

Last modified December 21, 2004. Version 1.
Checksum: 8A5384997DE621CD

FASTA22324,888
        10         20         30         40         50         60 
MDLQGRAVPS VDRLRVLLML FHTMAQIMAE QEVENLSGLS TNPEKDIFVV RENGTTCLMA 

        70         80         90        100        110        120 
EFAAKFIVPY DVWASNYVDL ITEQADIALT RGAEVKGRCG HSESELQVFW VDRAYALKML 

       130        140        150        160        170        180 
FVKESHNMSK GPEETWRLSK VQFVYDSSEK THFKDAVSAG KHTANSHHLS ALVTPAGKSY 

       190        200        210        220 
ECQAQQTISL ASSDPQKIVT MILSAVHIQP FDIISDFVFS EGN 

« Hide

References

[1]The German cDNA consortium
Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain cortex.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR860751 mRNA. Translation: CAH92864.1.
RefSeqNP_001126676.1. NM_001133204.1.
UniGenePab.2703.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100173676.
KEGGpon:100173676.

Organism-specific databases

CTD24141.

Phylogenomic databases

HOVERGENHBG051186.
InParanoidQ5R5V2.

Family and domain databases

InterProIPR002000. Lysosome-assoc_membr_glycop.
[Graphical view]
PfamPF01299. Lamp. 1 hit.
[Graphical view]
PROSITEPS00310. LAMP_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameLAMP5_PONAB
AccessionPrimary (citable) accession number: Q5R5V2
Entry history
Integrated into UniProtKB/Swiss-Prot: October 25, 2005
Last sequence update: December 21, 2004
Last modified: April 16, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families