Unreviewed, UniProtKB/TrEMBL Q5R3Z4 (Q5R3Z4_RAT)

Names and origin

Protein names

Submitted name:
    Leukocyte common antigen A EMBL AAA41516.1

Gene names

Name:

Ptprc RGD 3451

Organism

Rattus norvegicus (Rat) EMBL AAA41516.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	204 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	protein amino acid dephosphorylation Traceable author statement. Source: RGD response to gamma radiation Inferred from direct assay. Source: RGD
Cellular component	cell surface Inferred from direct assay. Source: RGD integral to membrane Inferred from direct assay. Source: RGD internal side of plasma membrane Traceable author statement. Source: RGD
Molecular function	protein binding Inferred from physical interaction. Source: RGD protein kinase regulator activity Traceable author statement. Source: RGD transmembrane receptor protein tyrosine phosphatase activity Traceable author statement. Source: RGD
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAA41516.1
	Non-terminal residue	204	1	EMBL AAA41516.1

Sequences

	Sequence		Length	Mass (Da)
	Q5R3Z4-1 [UniParc]. Last modified December 21, 2004. Version 1. Checksum: DA76F0E08F0669BB	FASTA	204	22,042
	10 20 30 40 50 60 QGTTDDGFSS TLMPHLTPQP DSQTPSARGA DTQTLSSQAD LTTLTAAPSG ETDPPGANLT 70 80 90 100 110 120 TPAPSTLGFA SNTTTSTEIA TPQTKPSCDE KFGNVTVRYI YDDSSKNFNA NLEGDKKPKC 130 140 150 160 170 180 EHTDCEKELK NLPECSQKNV TLSNGSCTPD KIINLDVPPG THNFNLTNCT PDIEANTSIC 190 200 LEWKIKNKFT CDIQKISYNY RCTP

References

[1]	"Gene structure of rat leukocyte common antigen (LCA): Alternative splicing of three exons." Jackson D.I., Barclay A.N. Immunogenetics 0:0-0(0) Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	M18347, M18348, M18349 Genomic DNA. Translation: AAA41516.1.
IPI	IPI00231601.
UniGene	Rn.90166
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q5R3Z4.
Genome annotation databases
Ensembl	ENSRNOT00000000814; ENSRNOP00000000814; ENSRNOG00000000655; Rattus norvegicus. [Genome view] ENSRNOT00000029865; ENSRNOP00000029889; ENSRNOG00000000655; Rattus norvegicus. [Genome view] ENSRNOT00000029878; ENSRNOP00000030503; ENSRNOG00000000655; Rattus norvegicus. [Genome view] ENSRNOT00000060292; ENSRNOP00000057042; ENSRNOG00000000655; Rattus norvegicus. [Genome view] ENSRNOT00000060293; ENSRNOP00000057043; ENSRNOG00000000655; Rattus norvegicus. [Genome view] ENSRNOT00000064785; ENSRNOP00000063859; ENSRNOG00000000655; Rattus norvegicus. [Genome view]
Phylogenomic databases
HOVERGEN	Q5R3Z4.
Gene expression databases
ArrayExpress	Q5R3Z4.
Genevestigator	Q5R3Z4.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

Q5R3Z4_RAT

Accession

Primary (citable) accession number: Q5R3Z4

Entry history

Integrated into UniProtKB/TrEMBL:	December 21, 2004
Last sequence update:	December 21, 2004
Last modified:	November 3, 2009
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)