Leukocyte common antigen B - Rattus norvegicus (Rat)

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Unreviewed, UniProtKB/TrEMBL Q5R3Z3 (Q5R3Z3_RAT)

Last modified November 24, 2009. Version 20. History...

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Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Leukocyte common antigen B EMBL AAA41517.1

Gene names

Name:

Ptprc RGD 3451

Organism

Rattus norvegicus (Rat) EMBL AAA41517.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	196 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	protein amino acid dephosphorylation Traceable author statement. Source: RGD response to gamma radiation Inferred from direct assay. Source: RGD
Cellular component	cell surface Inferred from direct assay. Source: RGD integral to membrane Inferred from direct assay. Source: RGD internal side of plasma membrane Traceable author statement. Source: RGD
Molecular function	protein binding Inferred from physical interaction. Source: RGD protein kinase regulator activity Traceable author statement. Source: RGD transmembrane receptor protein tyrosine phosphatase activity Traceable author statement. Source: RGD
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Experimental info

Non-terminal residue

1

EMBL AAA41517.1

Non-terminal residue

1

EMBL AAA41517.1

Sequences

Sequence

Length

Mass (Da)

Tools

Q5R3Z3-1 [UniParc].

Last modified December 21, 2004. Version 1.
Checksum: DA4A671AE9D65D1F
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196

21,199

        10         20         30         40         50         60 
QGTTDDGVPE ESTVPETFPG GTPILARNST APSPTHTSNV STTDISSGAN LTTPAPSTLG 

        70         80         90        100        110        120 
FASNTTTSTE IATPQTKPSC DEKFGNVTVR YIYDDSSKNF NANLEGDKKP KCEHTDCEKE 

       130        140        150        160        170        180 
LKNLPECSQK NVTLSNGSCT PDKIINLDVP PGTHNFNLTN CTPDIEANTS ICLEWKIKNK 

       190 
FTCDIQKISY NYRCTP

References

[1]	"Gene structure of rat leukocyte common antigen (LCA): Alternative splicing of three exons." Jackson D.I., Barclay A.N. Immunogenetics 0:0-0(0) Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	M18347, M18348, M18349 Genomic DNA. Translation: AAA41517.1.
IPI	IPI00389957.
UniGene	Rn.90166
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q5R3Z3.
Genome annotation databases
Ensembl	ENSRNOT00000060292; ENSRNOP00000057042; ENSRNOG00000000655; Rattus norvegicus. [Genome view]
Phylogenomic databases
HOVERGEN	Q5R3Z3.
Gene expression databases
ArrayExpress	Q5R3Z3.
Genevestigator	Q5R3Z3.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

Q5R3Z3_RAT

Accession

Primary (citable) accession number: Q5R3Z3

Entry history

Integrated into UniProtKB/TrEMBL:	December 21, 2004
Last sequence update:	December 21, 2004
Last modified:	November 24, 2009
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information