Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q5QXB1 (Q5QXB1_IDILO) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:IL1784
OrganismIdiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) [Complete proteome] [HAMAP]
Taxonomic identifier283942 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesIdiomarinaceaeIdiomarina

Protein attributes

Sequence length443 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5QXB1 [UniParc].

Last modified January 4, 2005. Version 1.
Checksum: 571029F879AA0738

FASTA44350,874
        10         20         30         40         50         60 
MTFLEQENRR LRYLDTQTNL PNSDWFELQC NKLISKSDRE FFVVVAQSES EDYLRLKYGE 

        70         80         90        100        110        120 
SVIRRLLASS YSRLKKHRQH PRLTATIALN KLVFILPKTV ENELKDVLLD IKNSLDKEYT 

       130        140        150        160        170        180 
FQGIKCQQSF QFGVARFPKH GETADVVVSR ALEAKKFASV NQFYHLYDTE NSEEFMERHE 

       190        200        210        220        230        240 
ISILLDEAIQ NDELDVCFQP KVTADGTCVG LEALARWDSP VLGSISPAIF IPIAEEYRMI 

       250        260        270        280        290        300 
SRLTDLIVQK VCAQISLWKK NDFPLLPVAI NISLLDFSQP DFISKLVKYL ADFSVKPSQI 

       310        320        330        340        350        360 
ELELTETCLE SDRVNSLELM NELKSWGFKV SVDDFGVGYS SVTRLAYYPI DKLKLDRALL 

       370        380        390        400        410        420 
RGIKTSGRQY SLVKGIFNIC SELKIKCVVE GVEEKSQLTR LTEIGFSEFQ GFYFSKPLTV 

       430        440 
TRYEKHVKTH GLVFLDKTGQ QLS 

« Hide

References

[1]"Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy."
Hou S., Saw J.H., Lee K.S., Freitas T.A., Belisle C., Kawarabayasi Y., Donachie S.P., Pikina A., Galperin M.Y., Koonin E.V., Makarova K.S., Omelchenko M.V., Sorokin A., Wolf Y.I., Li Q.X., Keum Y.S., Campbell S., Denery J. expand/collapse author list , Aizawa S., Shibata S., Malahoff A., Alam M.
Proc. Natl. Acad. Sci. U.S.A. 101:18036-18041(2004) [PubMed: 15596722] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-735 / DSM 15497 / L2-TR.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017340 Genomic DNA. Translation: AAV82616.1.
RefSeqYP_156165.1. NC_006512.1.

3D structure databases

ProteinModelPortalQ5QXB1.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3172249.
GenomeReviewsGene locus IL1784 in contig AE017340_GR.
KEGGilo:IL1784.
NMPDRfig|283942.3.peg.1683.
PATRIC22141678. VBIIdiLoi21852_1790.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAMERHEIS.

Family and domain databases

InterProIPR001054. A/G_cyclase.
IPR000160. Diguanylate_cyclase-pred.
IPR001633. Diguanylate_PEstase_EAL_dom.
[Graphical view]
Gene3DG3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
PfamPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMSSF55073. A/G_cyclase. 1 hit.
SSF141868. SSF141868. 1 hit.
PROSITEPS50883. EAL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5QXB1_IDILO
AccessionPrimary (citable) accession number: Q5QXB1
Entry history
Integrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)