Q5QWF9 (Q5QWF9_IDILO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Riboflavin synthase alpha chain EMBL AAV82242.1

Gene names

Name:	ribC EMBL AAV82242.1
Ordered Locus Names:	IL1402

Organism

Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) [Complete proteome] [HAMAP]

Taxonomic identifier

283942 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Idiomarinaceae › Idiomarina

Protein attributes

Sequence length	202 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	riboflavin biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	oxidoreductase activity Inferred from electronic annotation. Source: InterPro riboflavin synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5QWF9 [UniParc]. Last modified January 4, 2005. Version 1. Checksum: 102A6DE60B650371	FASTA	202	22,098
	10 20 30 40 50 60 MFTGIVQTQA TIFSVSDQGS FRHLVVKTEP QFLQNLAIGA SIAINGCCLT VVEFSDTEVH 70 80 90 100 110 120 FDVIDETLRL TNLGLLGEGD KVNLERSLKV GDEIGGHAVS GHIHCQGKVN KIDTSENNVA 130 140 150 160 170 180 MWIELPEQYT PYLFAKGFIA VNGASLTVGQ VEANCFSLHL IPETLRLTNL ESTQVGDSLN 190 200 IELDQQTITI VETVERVLAK RQ

References

[1]

"Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy." Hou S., Saw J.H., Lee K.S., Freitas T.A., Belisle C., Kawarabayasi Y., Donachie S.P., Pikina A., Galperin M.Y., Koonin E.V., Makarova K.S., Omelchenko M.V., Sorokin A., Wolf Y.I., Li Q.X., Keum Y.S., Campbell S., Denery J. , Aizawa S., Shibata S., Malahoff A., Alam M. Proc. Natl. Acad. Sci. U.S.A. 101:18036-18041(2004) [PubMed: 15596722] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-735 / DSM 15497 / L2-TR.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017340 Genomic DNA. Translation: AAV82242.1.
RefSeq	YP_155791.1. NC_006512.1.
3D structure databases
ProteinModelPortal	Q5QWF9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3172859.
GenomeReviews	Gene locus IL1402 in contig AE017340_GR.
KEGG	ilo:IL1402.
NMPDR	fig|283942.3.peg.1721.
PATRIC	22140881. VBIIdiLoi21852_1404.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG289809.
OMA	HILSGHV.
ProtClustDB	PRK09289.
Family and domain databases
InterPro	IPR023366. ATPase_F1/A1-cplx_a_su_N. IPR001783. Lumazine-bd. IPR017938. Riboflavin_synthase-like_b-brl. [Graphical view]
Gene3D	G3DSA:2.40.30.20. G3DSA:2.40.30.20. 2 hits.
KO	K00793.
PANTHER	PTHR21098. Lumazine_bd. 1 hit.
Pfam	PF00677. Lum_binding. 2 hits. [Graphical view]
PIRSF	PIRSF000498. Riboflavin_syn_A. 1 hit.
SUPFAM	SSF63380. Riboflavin_synthase_like_b-brl. 2 hits.
TIGRFAMs	TIGR00187. RibE. 1 hit.
PROSITE	PS51177. LUMAZINE_BIND. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5QWF9_IDILO

Accession

Primary (citable) accession number: Q5QWF9

Entry history

Integrated into UniProtKB/TrEMBL:	January 4, 2005
Last sequence update:	January 4, 2005
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)