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Q5QVR3

- Q5QVR3_IDILO

UniProt

Q5QVR3 - Q5QVR3_IDILO

Protein
Submitted name:

Glutamate decarboxylase putative

Gene

gadB

Organism
Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (04 Jan 2005)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciILOI283942:GI0U-2271-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glutamate decarboxylase putativeImported
    Gene namesi
    Name:gadBImported
    Ordered Locus Names:IL2256Imported
    OrganismiIdiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)Imported
    Taxonomic identifieri283942 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesIdiomarinaceaeIdiomarina
    ProteomesiUP000001171: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi283942.IL2256.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5QVR3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiGMMHNLV.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5QVR3-1 [UniParc]FASTAAdd to Basket

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    MSPKTDIAEV NQESLYRIFT IPEAPDSTLG KIEKHLSENL MGFLGEHIVA    50
    REKPLQEIER DFDKSQIPEE PAFVSDHTEF LLDKLVAHSV HTASPRFIGH 100
    MTSALPYFLL PLAKLMVGLN QNLVKIETSK AFTPLERNVI GMMHHLVYQQ 150
    DAPFYNRWMH SAQHSLGAFC SGGTIANMTA LWVARNRLLQ ADGDFAGISA 200
    DGLAAGLQHY GYSKLTVVVS ERGHYSLSKA ADVLGIGRRN LVSVATDSDN 250
    RIRIDELRKT CEKIAKEGGK VLALVGVAGT TETGHIDPLD EMATVAEEVD 300
    AHFHVDAAWG GATLLSEQHR PLLAGIERAD SVTIDAHKQM YVPMGAGLVL 350
    FKNPALVKSI EYHAEYIIRQ GSKDLGSHTM EGSRAGMAMM VFSAMHVIGR 400
    RGYELLINNS IDKARYFSKL ISEQDDFEVI TEPELCILTY RFVPIKVKTV 450
    LDKATPEQLA RLTPHLNALT RYIQKRQRET GQSFVSRTKL TPAQYHHEPT 500
    VVFRVVLANP LTTNEMLQEV LCEQRKIAAK ATSLRGALHT EMRELGMLI 549
    Length:549
    Mass (Da):61,069
    Last modified:January 4, 2005 - v1
    Checksum:iD4C420D99625E7A0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017340 Genomic DNA. Translation: AAV83088.1.
    RefSeqiYP_156637.1. NC_006512.1.

    Genome annotation databases

    EnsemblBacteriaiAAV83088; AAV83088; IL2256.
    GeneIDi3173263.
    KEGGiilo:IL2256.
    PATRICi22142650. VBIIdiLoi21852_2266.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017340 Genomic DNA. Translation: AAV83088.1 .
    RefSeqi YP_156637.1. NC_006512.1.

    3D structure databases

    ProteinModelPortali Q5QVR3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 283942.IL2256.

    Protocols and materials databases

    DNASUi 3173263.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAV83088 ; AAV83088 ; IL2256 .
    GeneIDi 3173263.
    KEGGi ilo:IL2256.
    PATRICi 22142650. VBIIdiLoi21852_2266.

    Phylogenomic databases

    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi GMMHNLV.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci ILOI283942:GI0U-2271-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-735 / DSM 15497 / L2-TRImported.

    Entry informationi

    Entry nameiQ5QVR3_IDILO
    AccessioniPrimary (citable) accession number: Q5QVR3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 4, 2005
    Last sequence update: January 4, 2005
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3