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Q5QVI8 (Q5QVI8_IDILO) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:IL2176 EMBL AAV83008.1
OrganismIdiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) [Complete proteome] [HAMAP] EMBL AAV83008.1
Taxonomic identifier283942 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesIdiomarinaceaeIdiomarina

Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q5QVI8 [UniParc].

Last modified January 4, 2005. Version 1.
Checksum: DE2734C430A76DEC

FASTA56463,273
        10         20         30         40         50         60 
MKQFNRRDFL KLFAATGAAV TVSTALQGCA SVGKTSERSS VKFDHGVASG DPTSNAILLW 

        70         80         90        100        110        120 
TRAVPENTAE KQVTLGWELA ADENFSSIIR SGTATTSASR DYTVKVDVTQ LSPNQRYYYR 

       130        140        150        160        170        180 
FLGKNSKSPS GKTQTLPESG LKPLKFAVFS CSNYPAGYFN PYSEAAKDDS IDAVIHLGDY 

       190        200        210        220        230        240 
IYEYGAGGYA TQGSQEIGRG LPDNNNTELF TLTDYRRRYA LYRTDEGLQA LHAHAPFIAV 

       250        260        270        280        290        300 
WDDHEISNDT WKNGAENHQE DEGSFIERRA AAVQAYYEWL PIRPPQGEAN LTIYRDFKFG 

       310        320        330        340        350        360 
DLVDLIILDT RVIGRDKQLN YDDYRDAESG QFNTQKFQQD MSSDRSIMGK KQLQWLVNKL 

       370        380        390        400        410        420 
NNSSARWQVL GQQLLMGKMN FPAAAFAADD RSKVTPLLLQ IAELKKRLQN GEELTAQQQA 

       430        440        450        460        470        480 
MVTQVTPYNL DAWDGYPIER EMLYRAAQKA NKQLVVIAGD THNAWHSELR SSDGAHIGVE 

       490        500        510        520        530        540 
FATSSVSSPG METYLSLDTK TAEQLAKALP TLIEDLKYTN LHQRGYMNLF ASEDAVEAEW 

       550        560 
VFVDTIRSKD YRVVNKHRAR YTGS 

« Hide

References

[1]"Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy."
Hou S., Saw J.H., Lee K.S., Freitas T.A., Belisle C., Kawarabayasi Y., Donachie S.P., Pikina A., Galperin M.Y., Koonin E.V., Makarova K.S., Omelchenko M.V., Sorokin A., Wolf Y.I., Li Q.X., Keum Y.S., Campbell S., Denery J. expand/collapse author list , Aizawa S., Shibata S., Malahoff A., Alam M.
Proc. Natl. Acad. Sci. U.S.A. 101:18036-18041(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-735 / DSM 15497 / L2-TR.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017340 Genomic DNA. Translation: AAV83008.1.
RefSeqYP_156557.1. NC_006512.1.

3D structure databases

ProteinModelPortalQ5QVI8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING283942.IL2176.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAV83008; AAV83008; IL2176.
GeneID3173807.
KEGGilo:IL2176.
PATRIC22142488. VBIIdiLoi21852_2186.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000240658.
KOK01113.
OMAHATMAAN.
OrthoDBEOG6X6R8Q.

Enzyme and pathway databases

BioCycILOI283942:GI0U-2190-MONOMER.

Family and domain databases

Gene3D3.60.21.10. 1 hit.
InterProIPR018946. Alk_phosphatase_PhoD-like.
IPR003961. Fibronectin_type3.
IPR029052. Metallo-depent_PP-like.
IPR006311. TAT_signal.
IPR019546. TAT_signal_bac_arc.
[Graphical view]
PfamPF09423. PhoD. 1 hit.
[Graphical view]
SMARTSM00060. FN3. 1 hit.
[Graphical view]
SUPFAMSSF56300. SSF56300. 3 hits.
TIGRFAMsTIGR01409. TAT_signal_seq. 1 hit.
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5QVI8_IDILO
AccessionPrimary (citable) accession number: Q5QVI8
Entry history
Integrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: June 11, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)