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Q5QMT0

- BGL01_ORYSJ

UniProt

Q5QMT0 - BGL01_ORYSJ

Protein

Beta-glucosidase 1

Gene

BGLU1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (04 Jan 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei68 – 681SubstrateBy similarity
    Binding sitei169 – 1691SubstrateBy similarity
    Binding sitei214 – 2141SubstrateBy similarity
    Active sitei215 – 2151Proton donorBy similarity
    Binding sitei353 – 3531SubstrateBy similarity
    Active sitei424 – 4241NucleophileBy similarity
    Binding sitei471 – 4711SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 1 (EC:3.2.1.21)
    Short name:
    Os1bglu1
    Gene namesi
    Name:BGLU1
    Ordered Locus Names:Os01g0508000, LOC_Os01g32364
    ORF Names:OSJNBa0094H06.33
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 1

    Organism-specific databases

    GrameneiQ5QMT0.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2121Sequence AnalysisAdd
    BLAST
    Chaini22 – 516495Beta-glucosidase 1PRO_0000390320Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi96 – 961N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi234 ↔ 237By similarity
    Glycosylationi290 – 2901N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi364 – 3641N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi432 – 4321N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Proteomic databases

    PRIDEiQ5QMT0.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5QMT0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni478 – 4792Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    KOiK05350.
    OMAiYYMYDPH.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q5QMT0-1 [UniParc]FASTAAdd to Basket

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    MGHRLVVVLL LALLVAGAAR AAEQAAGEDG IRGGAGADHQ EAAGITGGLS    50
    RRSFPAGFVF GTAASAYQVE GMALKDGRGP SIWDAFVKTP GEIANNATAD 100
    VTVDEYHRYK EDVNIMKSMG FDAYRFSISW SRIFPTGTGK VNWKGVAYYN 150
    RLINYMLKIG ITPYANLYHY DLPEALEVQY GGLLNRKIVE AFADYAEFCF 200
    KTFGDRVKNW MTFNEPRVVA ALGYDDGNFA PGRCTKCTAG NSATEPYIVA 250
    HHLILSHASA VQRYRHKYQH IQKGKIGILL DFVWYEGLTN STADQAAAQR 300
    SRDFHVGWFL HPIIYGEYPK SLQVIVKERL PKFTADEVHM VKGSIDYVGI 350
    NQYTAYYVRD QQPNATTLPS YSSDWHAAPI YERDGVPIGP RANSDWLYIV 400
    PWGLYKAVTY VKEKYGNPTM FLSENGMDDP GNVTIAQGVH DTTRVAYYRS 450
    YITKLKEAID DGANCIGYFA WSLLDNFEWK LGYTSRFGLV YVDFRTLRRY 500
    PKMSAYWFRD LVSSKN 516
    Length:516
    Mass (Da):58,001
    Last modified:January 4, 2005 - v1
    Checksum:iB6D4AA9D6A9467D4
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti208 – 2081K → E in AK069177. (PubMed:12869764)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003217 Genomic DNA. Translation: BAD73293.1.
    AP008207 Genomic DNA. Translation: BAF05070.1.
    AK069177 mRNA. No translation available.
    RefSeqiNP_001043156.1. NM_001049691.1.
    UniGeneiOs.35044.

    Genome annotation databases

    EnsemblPlantsiOS01T0508000-01; OS01T0508000-01; OS01G0508000.
    GeneIDi4324050.
    KEGGiosa:4324050.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003217 Genomic DNA. Translation: BAD73293.1 .
    AP008207 Genomic DNA. Translation: BAF05070.1 .
    AK069177 mRNA. No translation available.
    RefSeqi NP_001043156.1. NM_001049691.1.
    UniGenei Os.35044.

    3D structure databases

    ProteinModelPortali Q5QMT0.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Proteomic databases

    PRIDEi Q5QMT0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS01T0508000-01 ; OS01T0508000-01 ; OS01G0508000 .
    GeneIDi 4324050.
    KEGGi osa:4324050.

    Organism-specific databases

    Gramenei Q5QMT0.

    Phylogenomic databases

    eggNOGi COG2723.
    KOi K05350.
    OMAi YYMYDPH.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence and structure of rice chromosome 1."
      Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
      , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
      Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    5. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
      Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
      BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL01_ORYSJ
    AccessioniPrimary (citable) accession number: Q5QMT0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 2009
    Last sequence update: January 4, 2005
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3