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Protein
Submitted name:

Cellular nucleic acid binding protein

Gene

Cnbp

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Cellular nucleic acid binding proteinImported
Gene namesi
Name:CnbpImported
Synonyms:Cnbp1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:88431 Cnbp

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiQ5QJQ9

Expressioni

Gene expression databases

BgeeiENSMUSG00000030057
ExpressionAtlasiQ5QJQ9 baseline and differential

Structurei

3D structure databases

SMRiQ5QJQ9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 20CCHC-typeInterPro annotationAdd BLAST15
Domaini54 – 67CCHC-typeInterPro annotationAdd BLAST14
Domaini75 – 90CCHC-typeInterPro annotationAdd BLAST16
Domaini99 – 112CCHC-typeInterPro annotationAdd BLAST14
Domaini119 – 135CCHC-typeInterPro annotationAdd BLAST17
Domaini137 – 153CCHC-typeInterPro annotationAdd BLAST17
Domaini159 – 172CCHC-typeInterPro annotationAdd BLAST14

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG4400 Eukaryota
COG5082 LUCA
HOVERGENiHBG000397
KOiK09250
OMAiRRECDEK
OrthoDBiEOG091G0LZK

Family and domain databases

InterProiView protein in InterPro
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF00098 zf-CCHC, 7 hits
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 7 hits
SUPFAMiSSF57756 SSF57756, 4 hits
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 7 hits

Sequencei

Sequence statusi: Complete.

Q5QJQ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSNECFKCG RSGHWARECP TGGGRGRGMR SRGRGGFTSD RGFQFVSSSL
60 70 80 90 100
PDICYRCGES GHLAKDCDLQ EDEACYNCGR GGHIAKDCKE PKREREQCCY
110 120 130 140 150
NCGKPGHLAR DCDHADEQKC YSCGEFGHIQ KDCTKVKCYR CGETGHVAIN
160 170
CSKTSEVNCY RCGESGHLAR ECTIEATA
Length:178
Mass (Da):19,592
Last modified:May 10, 2005 - v1
Checksum:iDF0CDAB9BF3D96BB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY329623 Genomic DNA Translation: AAR89463.1
AK144740 mRNA Translation: BAE26042.1
AK159810 mRNA Translation: BAE35390.1
RefSeqiNP_001103215.1, NM_001109745.1
NP_001103216.1, NM_001109746.1
NP_001334254.1, NM_001347325.1
NP_038521.1, NM_013493.3
UniGeneiMm.290251

Genome annotation databases

GeneIDi12785
KEGGimmu:12785

Similar proteinsi

Entry informationi

Entry nameiQ5QJQ9_MOUSE
AccessioniPrimary (citable) accession number: Q5QJQ9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: May 23, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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