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Protein
Submitted name:

Cellular nucleic acid binding protein

Gene

Cnbp

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cellular nucleic acid binding proteinImported
Gene namesi
Name:CnbpImported
Synonyms:Cnbp1Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:88431. Cnbp.

PTM / Processingi

Proteomic databases

MaxQBiQ5QJQ9.

Expressioni

Gene expression databases

BgeeiENSMUSG00000030057.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000032138.

Structurei

3D structure databases

SMRiQ5QJQ9. Positions 4-70, 75-113, 136-175.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 2015CCHC-typeInterPro annotationAdd
BLAST
Domaini54 – 6714CCHC-typeInterPro annotationAdd
BLAST
Domaini75 – 9016CCHC-typeInterPro annotationAdd
BLAST
Domaini99 – 11214CCHC-typeInterPro annotationAdd
BLAST
Domaini119 – 13517CCHC-typeInterPro annotationAdd
BLAST
Domaini137 – 15317CCHC-typeInterPro annotationAdd
BLAST
Domaini159 – 17214CCHC-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG4400. Eukaryota.
COG5082. LUCA.
HOVERGENiHBG000397.
KOiK09250.
OMAiSRECDQD.
OrthoDBiEOG091G0LZK.
PhylomeDBiQ5QJQ9.

Family and domain databases

Gene3Di4.10.60.10. 4 hits.
InterProiIPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00098. zf-CCHC. 7 hits.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 7 hits.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 4 hits.
PROSITEiPS50158. ZF_CCHC. 7 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5QJQ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSNECFKCG RSGHWARECP TGGGRGRGMR SRGRGGFTSD RGFQFVSSSL
60 70 80 90 100
PDICYRCGES GHLAKDCDLQ EDEACYNCGR GGHIAKDCKE PKREREQCCY
110 120 130 140 150
NCGKPGHLAR DCDHADEQKC YSCGEFGHIQ KDCTKVKCYR CGETGHVAIN
160 170
CSKTSEVNCY RCGESGHLAR ECTIEATA
Length:178
Mass (Da):19,592
Last modified:May 10, 2005 - v1
Checksum:iDF0CDAB9BF3D96BB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY329623 Genomic DNA. Translation: AAR89463.1.
AK144740 mRNA. Translation: BAE26042.1.
AK159810 mRNA. Translation: BAE35390.1.
RefSeqiNP_001103215.1. NM_001109745.1.
NP_001103216.1. NM_001109746.1.
NP_038521.1. NM_013493.3.
UniGeneiMm.290251.

Genome annotation databases

GeneIDi12785.
KEGGimmu:12785.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY329623 Genomic DNA. Translation: AAR89463.1.
AK144740 mRNA. Translation: BAE26042.1.
AK159810 mRNA. Translation: BAE35390.1.
RefSeqiNP_001103215.1. NM_001109745.1.
NP_001103216.1. NM_001109746.1.
NP_038521.1. NM_013493.3.
UniGeneiMm.290251.

3D structure databases

SMRiQ5QJQ9. Positions 4-70, 75-113, 136-175.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000032138.

Proteomic databases

MaxQBiQ5QJQ9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi12785.
KEGGimmu:12785.

Organism-specific databases

CTDi7555.
MGIiMGI:88431. Cnbp.

Phylogenomic databases

eggNOGiKOG4400. Eukaryota.
COG5082. LUCA.
HOVERGENiHBG000397.
KOiK09250.
OMAiSRECDQD.
OrthoDBiEOG091G0LZK.
PhylomeDBiQ5QJQ9.

Miscellaneous databases

ChiTaRSiCnbp. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000030057.

Family and domain databases

Gene3Di4.10.60.10. 4 hits.
InterProiIPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00098. zf-CCHC. 7 hits.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 7 hits.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 4 hits.
PROSITEiPS50158. ZF_CCHC. 7 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5QJQ9_MOUSE
AccessioniPrimary (citable) accession number: Q5QJQ9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: September 7, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.