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Protein
Submitted name:

Cellular nucleic acid binding protein

Gene

Cnbp

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Cellular nucleic acid binding proteinImported
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:CnbpImported
Synonyms:Cnbp1Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:88431. Cnbp.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

MaxQBiQ5QJQ9.

Expressioni

Gene expression databases

BgeeiENSMUSG00000030057.
ExpressionAtlasiQ5QJQ9. baseline and differential.

Structurei

3D structure databases

SMRiQ5QJQ9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 20CCHC-typeInterPro annotationAdd BLAST15
Domaini54 – 67CCHC-typeInterPro annotationAdd BLAST14
Domaini75 – 90CCHC-typeInterPro annotationAdd BLAST16
Domaini99 – 112CCHC-typeInterPro annotationAdd BLAST14
Domaini119 – 135CCHC-typeInterPro annotationAdd BLAST17
Domaini137 – 153CCHC-typeInterPro annotationAdd BLAST17
Domaini159 – 172CCHC-typeInterPro annotationAdd BLAST14

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG4400. Eukaryota.
COG5082. LUCA.
HOVERGENiHBG000397.
KOiK09250.
OMAiRRECDEK.
OrthoDBiEOG091G0LZK.

Family and domain databases

Gene3Di4.10.60.10. 7 hits.
InterProiView protein in InterPro
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF00098. zf-CCHC. 7 hits.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 7 hits.
SUPFAMiSSF57756. SSF57756. 4 hits.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 7 hits.

Sequencei

Sequence statusi: Complete.

Q5QJQ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSNECFKCG RSGHWARECP TGGGRGRGMR SRGRGGFTSD RGFQFVSSSL
60 70 80 90 100
PDICYRCGES GHLAKDCDLQ EDEACYNCGR GGHIAKDCKE PKREREQCCY
110 120 130 140 150
NCGKPGHLAR DCDHADEQKC YSCGEFGHIQ KDCTKVKCYR CGETGHVAIN
160 170
CSKTSEVNCY RCGESGHLAR ECTIEATA
Length:178
Mass (Da):19,592
Last modified:May 10, 2005 - v1
Checksum:iDF0CDAB9BF3D96BB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY329623 Genomic DNA. Translation: AAR89463.1.
AK144740 mRNA. Translation: BAE26042.1.
AK159810 mRNA. Translation: BAE35390.1.
RefSeqiNP_001103215.1. NM_001109745.1.
NP_001103216.1. NM_001109746.1.
NP_001334254.1. NM_001347325.1.
NP_038521.1. NM_013493.3.
UniGeneiMm.290251.

Genome annotation databases

GeneIDi12785.
KEGGimmu:12785.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ5QJQ9_MOUSE
AccessioniPrimary (citable) accession number: Q5QJQ9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: July 5, 2017
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)