Q5QJ60 (Q5QJ60_CYNDA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: FAD-linked oxidoreductase BG60 EMBL AAS02108.1
Organism	Cynodon dactylon (Bermuda grass) (Panicum dactylon) EMBL AAS02108.1
Taxonomic identifier	28909 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Chloridoideae › Cynodonteae › Eleusininae › Cynodon

Protein attributes

Sequence length	522 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 4DNS
Gene Ontology (GO)
Molecular_function	UDP-N-acetylmuramate dehydrogenase activity Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5QJ60 [UniParc]. Last modified January 4, 2005. Version 1. Checksum: 3C781F7FC155B33F	FASTA	522	57,413
	10 20 30 40 50 60 MARSRAFAFA LLICAVAASC HVALSAPPPY AKQVERDFLT CLTKDIPPRQ LYAKSSPAYA 70 80 90 100 110 120 SVWSSTVRNI KFLSDKTVKP LYIITPTNAS HIQAAVVCGR RHGMRIRVRS GGHDYEGLSY 130 140 150 160 170 180 RSEKPEPFAV VDMNKMRAVS IDGKAATAWV DSGAQLGDLY YGIAKASPKL GFPAGVCTTI 190 200 210 220 230 240 GVGGHFSGGG FGMLLRKYGT AADNVIDAKV VDAQGRLLDR KAMGEDHFWA IRGGGGESFG 250 260 270 280 290 300 IVASWQVKLL PVPPKVTVFQ VHKGIKEGAI DLVTKWQTVA PALPDDLMIR IMAMGQGAMF 310 320 330 340 350 360 EALYLGTCKD LVLLMTARFP ELGMNATHCK EMTWIESVPY IPMGPKGTVR DLLNRTSNIK 370 380 390 400 410 420 AFGKYKSDYV LEPIPKSDWE KIFTWLVKPG AGVMIMDPYG GGIASVPESA TPFPRRSGVL 430 440 450 460 470 480 FNIQYVVYWF GEGAAALPTQ WTRDIYDFMT PYVSKNPRQA YVNYRDLDLG VNQVVGNVST 490 500 510 520 YASGKVWGEK YFKGNFERLA RTKGKIDPED YFRNEQSIPP LL

References

[1]	"Molecular cloning and expression of an allergen BG60 from Bermuda grass (Cynodon dactylon)." Chuang J.-G., Chow L.-P., Su S.-N. Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Various cross-reactivity of the grass pollen group 4 allergens: crystallographic study of the Bermuda grass isoallergen Cyn d 4." Huang T.H., Peng H.J., Su S.N., Liaw S.H. Acta Crystallogr. D 68:1303-1310(2012) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) OF 26-522.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AY451241 mRNA. Translation: AAS02108.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4DNS	X-ray	2.15	A/B	26-522	[»]

ProteinModelPortal

Q5QJ60.

ModBase

Search...

Protein family/group databases

Allergome

819. Cyn d 4.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

KEGG

dosa:Os06t0548800-01.
dosa:Os06t0549900-01.

Organism-specific databases

Gramene

Q5QJ60.

Family and domain databases

Gene3D

3.30.43.10. 1 hit.
3.30.465.10. 1 hit.

InterPro

IPR012951. BBE.
IPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR006094. Oxid_FAD_bind_N.
[Graphical view]

Pfam

PF08031. BBE. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view]

SUPFAM

SSF56176. FAD-binding_2. 1 hit.

PROSITE

PS51387. FAD_PCMH. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q5QJ60_CYNDA

Accession

Primary (citable) accession number: Q5QJ60

Entry history

Integrated into UniProtKB/TrEMBL:	January 4, 2005
Last sequence update:	January 4, 2005
Last modified:	May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)