Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q5QJ60

- Q5QJ60_CYNDA

UniProt

Q5QJ60 - Q5QJ60_CYNDA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

FAD-linked oxidoreductase BG60

Gene
N/A
Organism
Cynodon dactylon (Bermuda grass) (Panicum dactylon)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei119 – 1191FADImported
Binding sitei191 – 1911FAD; via amide nitrogen and carbonyl oxygenImported
Binding sitei237 – 2371FAD; via amide nitrogenImported
Binding sitei242 – 2421FAD; via amide nitrogen and carbonyl oxygenImported

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi108 – 1147FADImported
Nucleotide bindingi176 – 1772FADImported
Nucleotide bindingi181 – 1855FADImported
Nucleotide bindingi461 – 4655FADImported

GO - Molecular functioni

  1. flavin adenine dinucleotide binding Source: InterPro
  2. UDP-N-acetylmuramate dehydrogenase activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

FADImported, Flavoprotein, Nucleotide-bindingImported

Names & Taxonomyi

Protein namesi
Submitted name:
FAD-linked oxidoreductase BG60Imported
OrganismiCynodon dactylon (Bermuda grass) (Panicum dactylon)Imported
Taxonomic identifieri28909 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladeChloridoideaeCynodonteaeEleusininaeCynodon

Organism-specific databases

GrameneiQ5QJ60.

Pathology & Biotechi

Protein family/group databases

Allergomei819. Cyn d 4.

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi88 – 881N-linked (GlcNAc...)Imported
Glycosylationi325 – 3251N-linked (GlcNAc...)Imported

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4DNSX-ray2.15A/B26-522[»]
ProteinModelPortaliQ5QJ60.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di3.30.43.10. 1 hit.
3.30.465.10. 1 hit.
InterProiIPR012951. BBE.
IPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR006094. Oxid_FAD_bind_N.
[Graphical view]
PfamiPF08031. BBE. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view]
SUPFAMiSSF56176. SSF56176. 1 hit.
PROSITEiPS51387. FAD_PCMH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5QJ60-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARSRAFAFA LLICAVAASC HVALSAPPPY AKQVERDFLT CLTKDIPPRQ
60 70 80 90 100
LYAKSSPAYA SVWSSTVRNI KFLSDKTVKP LYIITPTNAS HIQAAVVCGR
110 120 130 140 150
RHGMRIRVRS GGHDYEGLSY RSEKPEPFAV VDMNKMRAVS IDGKAATAWV
160 170 180 190 200
DSGAQLGDLY YGIAKASPKL GFPAGVCTTI GVGGHFSGGG FGMLLRKYGT
210 220 230 240 250
AADNVIDAKV VDAQGRLLDR KAMGEDHFWA IRGGGGESFG IVASWQVKLL
260 270 280 290 300
PVPPKVTVFQ VHKGIKEGAI DLVTKWQTVA PALPDDLMIR IMAMGQGAMF
310 320 330 340 350
EALYLGTCKD LVLLMTARFP ELGMNATHCK EMTWIESVPY IPMGPKGTVR
360 370 380 390 400
DLLNRTSNIK AFGKYKSDYV LEPIPKSDWE KIFTWLVKPG AGVMIMDPYG
410 420 430 440 450
GGIASVPESA TPFPRRSGVL FNIQYVVYWF GEGAAALPTQ WTRDIYDFMT
460 470 480 490 500
PYVSKNPRQA YVNYRDLDLG VNQVVGNVST YASGKVWGEK YFKGNFERLA
510 520
RTKGKIDPED YFRNEQSIPP LL
Length:522
Mass (Da):57,413
Last modified:January 4, 2005 - v1
Checksum:i3C781F7FC155B33F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY451241 mRNA. Translation: AAS02108.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY451241 mRNA. Translation: AAS02108.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4DNS X-ray 2.15 A/B 26-522 [» ]
ProteinModelPortali Q5QJ60.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

Allergomei 819. Cyn d 4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

Gramenei Q5QJ60.

Family and domain databases

Gene3Di 3.30.43.10. 1 hit.
3.30.465.10. 1 hit.
InterProi IPR012951. BBE.
IPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR006094. Oxid_FAD_bind_N.
[Graphical view ]
Pfami PF08031. BBE. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view ]
SUPFAMi SSF56176. SSF56176. 1 hit.
PROSITEi PS51387. FAD_PCMH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular cloning and expression of an allergen BG60 from Bermuda grass (Cynodon dactylon)."
    Chuang J.-G., Chow L.-P., Su S.-N.
    Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Various cross-reactivity of the grass pollen group 4 allergens: crystallographic study of the Bermuda grass isoallergen Cyn d 4."
    Huang T.H., Peng H.J., Su S.N., Liaw S.H.
    Acta Crystallogr. D 68:1303-1310(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) OF 26-522 IN COMPLEX WITH FAD, GLYCOSYLATION AT ASN-88 AND ASN-325.

Entry informationi

Entry nameiQ5QJ60_CYNDA
AccessioniPrimary (citable) accession number: Q5QJ60
Entry historyi
Integrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: October 29, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3