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Q5QJ60

- Q5QJ60_CYNDA

UniProt

Q5QJ60 - Q5QJ60_CYNDA

Protein
Submitted name:

FAD-linked oxidoreductase BG60

Gene
N/A
Organism
Cynodon dactylon (Bermuda grass) (Panicum dactylon)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (04 Jan 2005)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei119 – 1191FADImported
    Binding sitei191 – 1911FAD; via amide nitrogen and carbonyl oxygenImported
    Binding sitei237 – 2371FAD; via amide nitrogenImported
    Binding sitei242 – 2421FAD; via amide nitrogen and carbonyl oxygenImported

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi108 – 1147FADImported
    Nucleotide bindingi176 – 1772FADImported
    Nucleotide bindingi181 – 1855FADImported
    Nucleotide bindingi461 – 4655FADImported

    GO - Molecular functioni

    1. flavin adenine dinucleotide binding Source: InterPro
    2. UDP-N-acetylmuramate dehydrogenase activity Source: InterPro

    Keywords - Ligandi

    FADImported, Flavoprotein, Nucleotide-bindingImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    FAD-linked oxidoreductase BG60Imported
    OrganismiCynodon dactylon (Bermuda grass) (Panicum dactylon)Imported
    Taxonomic identifieri28909 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladeChloridoideaeCynodonteaeEleusininaeCynodon

    Organism-specific databases

    GrameneiQ5QJ60.

    Pathology & Biotechi

    Protein family/group databases

    Allergomei819. Cyn d 4.

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi88 – 881N-linked (GlcNAc...)Imported
    Glycosylationi325 – 3251N-linked (GlcNAc...)Imported

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4DNSX-ray2.15A/B26-522[»]
    ProteinModelPortaliQ5QJ60.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    Gene3Di3.30.43.10. 1 hit.
    3.30.465.10. 1 hit.
    InterProiIPR012951. BBE.
    IPR016169. CO_DH_flavot_FAD-bd_sub2.
    IPR016166. FAD-bd_2.
    IPR016167. FAD-bd_2_sub1.
    IPR006094. Oxid_FAD_bind_N.
    [Graphical view]
    PfamiPF08031. BBE. 1 hit.
    PF01565. FAD_binding_4. 1 hit.
    [Graphical view]
    SUPFAMiSSF56176. SSF56176. 1 hit.
    PROSITEiPS51387. FAD_PCMH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5QJ60-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARSRAFAFA LLICAVAASC HVALSAPPPY AKQVERDFLT CLTKDIPPRQ    50
    LYAKSSPAYA SVWSSTVRNI KFLSDKTVKP LYIITPTNAS HIQAAVVCGR 100
    RHGMRIRVRS GGHDYEGLSY RSEKPEPFAV VDMNKMRAVS IDGKAATAWV 150
    DSGAQLGDLY YGIAKASPKL GFPAGVCTTI GVGGHFSGGG FGMLLRKYGT 200
    AADNVIDAKV VDAQGRLLDR KAMGEDHFWA IRGGGGESFG IVASWQVKLL 250
    PVPPKVTVFQ VHKGIKEGAI DLVTKWQTVA PALPDDLMIR IMAMGQGAMF 300
    EALYLGTCKD LVLLMTARFP ELGMNATHCK EMTWIESVPY IPMGPKGTVR 350
    DLLNRTSNIK AFGKYKSDYV LEPIPKSDWE KIFTWLVKPG AGVMIMDPYG 400
    GGIASVPESA TPFPRRSGVL FNIQYVVYWF GEGAAALPTQ WTRDIYDFMT 450
    PYVSKNPRQA YVNYRDLDLG VNQVVGNVST YASGKVWGEK YFKGNFERLA 500
    RTKGKIDPED YFRNEQSIPP LL 522
    Length:522
    Mass (Da):57,413
    Last modified:January 4, 2005 - v1
    Checksum:i3C781F7FC155B33F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY451241 mRNA. Translation: AAS02108.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY451241 mRNA. Translation: AAS02108.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4DNS X-ray 2.15 A/B 26-522 [» ]
    ProteinModelPortali Q5QJ60.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    Allergomei 819. Cyn d 4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    Gramenei Q5QJ60.

    Family and domain databases

    Gene3Di 3.30.43.10. 1 hit.
    3.30.465.10. 1 hit.
    InterProi IPR012951. BBE.
    IPR016169. CO_DH_flavot_FAD-bd_sub2.
    IPR016166. FAD-bd_2.
    IPR016167. FAD-bd_2_sub1.
    IPR006094. Oxid_FAD_bind_N.
    [Graphical view ]
    Pfami PF08031. BBE. 1 hit.
    PF01565. FAD_binding_4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56176. SSF56176. 1 hit.
    PROSITEi PS51387. FAD_PCMH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular cloning and expression of an allergen BG60 from Bermuda grass (Cynodon dactylon)."
      Chuang J.-G., Chow L.-P., Su S.-N.
      Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "Various cross-reactivity of the grass pollen group 4 allergens: crystallographic study of the Bermuda grass isoallergen Cyn d 4."
      Huang T.H., Peng H.J., Su S.N., Liaw S.H.
      Acta Crystallogr. D 68:1303-1310(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) OF 26-522 IN COMPLEX WITH FAD, GLYCOSYLATION AT ASN-88 AND ASN-325.

    Entry informationi

    Entry nameiQ5QJ60_CYNDA
    AccessioniPrimary (citable) accession number: Q5QJ60
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 4, 2005
    Last sequence update: January 4, 2005
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3