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Q5QIB7 (Q5QIB7_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Estrogen receptor-related receptor betaX EMBL AAS46731.1
Gene names
Name:Esrrb RGD 1359557
OrganismRattus norvegicus (Rat) EMBL AAS46731.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length374 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the nuclear hormone receptor family. RuleBase RU000377

Contains 1 nuclear receptor DNA-binding domain. SAAS SAAS000536

Sequences

Sequence LengthMass (Da)Tools
Q5QIB7 [UniParc].

Last modified January 4, 2005. Version 1.
Checksum: F25905F211273C2D

FASTA37441,907
        10         20         30         40         50         60 
MALGTCANGL DVLTMFAGAG LGSNPCHQSS GIMEHSAVKG EYMLNTIHKP LYIMCQDIAS 

        70         80         90        100        110        120 
GYHYRVASYK ACKTFFKRTI QGNIKYSCPA TNKCEITKQR RKFCQVCQFR KCLKVGMLKK 

       130        140        150        160        170        180 
SVHADQVLGG GQKYKGQLDL EKSPYLSLQI SLPAKKSLTK IVSYLLVAEL DKLYAMPPGD 

       190        200        210        220        230        240 
IPEGDIKALP ILCDLAAQEL VVLISWAKNI VDFSSLSLGD QMSLLQSAGM GSLILGTVNH 

       250        260        270        280        290        300 
SLPYNDKQAY AEDYMMGEEH SPLVGMLELC RATLQLVHRY KKLKVEEEEL VMFKALTLAN 

       310        320        330        340        350        360 
PDSEYIEDLE AVQKLQDLLH KALQDCELSQ YHEEPWRPLL WQTAAIATQH FYSVKLQGQM 

       370 
PMHKLFLEML EAEV

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References

[1]"Molecular cloning and expression study of estrogen receptor-related receptor beta in rat prostate gland."
Lui K., Chen S., Chan F.L.
Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY466435 mRNA. Translation: AAS46731.1.
IPIIPI00515807.

3D structure databases

ProteinModelPortalQ5QIB7.
SMRQ5QIB7. Positions 47-135, 160-374.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD1359557. Esrrb.

Phylogenomic databases

HOVERGENHBG108344.

Gene expression databases

GenevestigatorQ5QIB7.

Family and domain databases

Gene3D1.10.565.10. 1 hit.
3.30.50.10. 1 hit.
InterProIPR008946. Nucl_hormone_rcpt_ligand-bd.
IPR000536. Nucl_hrmn_rcpt_lig-bd_core.
IPR001723. Str_hrmn_rcpt.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamPF00104. Hormone_recep. 1 hit.
PF00105. zf-C4. 1 hit.
[Graphical view]
PRINTSPR00398. STRDHORMONER.
PR00047. STROIDFINGER.
SMARTSM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
[Graphical view]
SUPFAMSSF48508. Str_ncl_receptor. 1 hit.
PROSITEPS51030. NUCLEAR_REC_DBD_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5QIB7_RAT
AccessionPrimary (citable) accession number: Q5QIB7
Entry history
Integrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: April 3, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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