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Q5QIB7

- Q5QIB7_RAT

UniProt

Q5QIB7 - Q5QIB7_RAT

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Protein
Submitted name:

Estrogen receptor-related receptor betaX

Gene

Esrrb

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
  2. sequence-specific DNA binding transcription factor activity Source: InterPro
  3. steroid hormone receptor activity Source: InterPro
  4. zinc ion binding Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Estrogen receptor-related receptor betaXImported
Gene namesi
Name:EsrrbImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1359557. Esrrb.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Expressioni

Gene expression databases

GenevestigatoriQ5QIB7.

Structurei

3D structure databases

ProteinModelPortaliQ5QIB7.
SMRiQ5QIB7. Positions 47-135, 160-374.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.UniRule annotation
Contains nuclear receptor DNA-binding domain.SAAS annotation

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

HOVERGENiHBG108344.

Family and domain databases

Gene3Di1.10.565.10. 1 hit.
3.30.50.10. 1 hit.
InterProiIPR008946. Nucl_hormone_rcpt_ligand-bd.
IPR000536. Nucl_hrmn_rcpt_lig-bd_core.
IPR001723. Str_hrmn_rcpt.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamiPF00104. Hormone_recep. 1 hit.
PF00105. zf-C4. 1 hit.
[Graphical view]
PRINTSiPR00398. STRDHORMONER.
PR00047. STROIDFINGER.
SMARTiSM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
[Graphical view]
SUPFAMiSSF48508. SSF48508. 1 hit.
PROSITEiPS51030. NUCLEAR_REC_DBD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5QIB7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALGTCANGL DVLTMFAGAG LGSNPCHQSS GIMEHSAVKG EYMLNTIHKP
60 70 80 90 100
LYIMCQDIAS GYHYRVASYK ACKTFFKRTI QGNIKYSCPA TNKCEITKQR
110 120 130 140 150
RKFCQVCQFR KCLKVGMLKK SVHADQVLGG GQKYKGQLDL EKSPYLSLQI
160 170 180 190 200
SLPAKKSLTK IVSYLLVAEL DKLYAMPPGD IPEGDIKALP ILCDLAAQEL
210 220 230 240 250
VVLISWAKNI VDFSSLSLGD QMSLLQSAGM GSLILGTVNH SLPYNDKQAY
260 270 280 290 300
AEDYMMGEEH SPLVGMLELC RATLQLVHRY KKLKVEEEEL VMFKALTLAN
310 320 330 340 350
PDSEYIEDLE AVQKLQDLLH KALQDCELSQ YHEEPWRPLL WQTAAIATQH
360 370
FYSVKLQGQM PMHKLFLEML EAEV
Length:374
Mass (Da):41,907
Last modified:January 4, 2005 - v1
Checksum:iF25905F211273C2D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY466435 mRNA. Translation: AAS46731.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY466435 mRNA. Translation: AAS46731.1 .

3D structure databases

ProteinModelPortali Q5QIB7.
SMRi Q5QIB7. Positions 47-135, 160-374.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

RGDi 1359557. Esrrb.

Phylogenomic databases

HOVERGENi HBG108344.

Gene expression databases

Genevestigatori Q5QIB7.

Family and domain databases

Gene3Di 1.10.565.10. 1 hit.
3.30.50.10. 1 hit.
InterProi IPR008946. Nucl_hormone_rcpt_ligand-bd.
IPR000536. Nucl_hrmn_rcpt_lig-bd_core.
IPR001723. Str_hrmn_rcpt.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
[Graphical view ]
Pfami PF00104. Hormone_recep. 1 hit.
PF00105. zf-C4. 1 hit.
[Graphical view ]
PRINTSi PR00398. STRDHORMONER.
PR00047. STROIDFINGER.
SMARTi SM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
[Graphical view ]
SUPFAMi SSF48508. SSF48508. 1 hit.
PROSITEi PS51030. NUCLEAR_REC_DBD_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular cloning and expression study of estrogen receptor-related receptor beta in rat prostate gland."
    Lui K., Chen S., Chan F.L.
    Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ5QIB7_RAT
AccessioniPrimary (citable) accession number: Q5QIB7
Entry historyi
Integrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: October 29, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)