Q5PXE8 (Q5PXE8_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RAR-like GTPase variant EMBL AAV83924.1

Gene names

Name:

RAB40C EMBL AAV83924.1

Organism

Homo sapiens (Human) EMBL AAV83924.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	262 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Pathway	Protein modification; protein ubiquitination. SAAS SAAS001496
Sequence similarities	Belongs to the small GTPase superfamily. Rab family. RuleBase RU003315 Contains 1 SOCS box domain. SAAS SAAS001496

Ontologies

Keywords
Ligand	GTP-binding RuleBase RU003312 Nucleotide-binding
Gene Ontology (GO)
Biological process	protein transport Inferred from electronic annotation. Source: InterPro small GTPase mediated signal transduction Inferred from electronic annotation. Source: InterPro
Molecular function	GTP binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5PXE8 [UniParc]. Last modified January 4, 2005. Version 1. Checksum: 8D0754A7549180B7	FASTA	262	29,226
	10 20 30 40 50 60 MGSQGSPVKS YDYLLKFLLV GDSDVGKGEI LESLQDGAAE SPYAYSNGID YKTTTILLDG 70 80 90 100 110 120 RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNRW SFDGIDRWIK EIDERQVPTE 130 140 150 160 170 180 QARAYAEKNC MTFFEVSPLC NFNVIESFTE LSRIVLMRHG MEKIWRPNRV FSLQDLCCRA 190 200 210 220 230 240 IVSCTPVHLI DKLPLPVTIK SHLKSFSMAN GMNAVMMHGR SYSLASGAGG GGSKGNSLKR 250 260 SKSIRPPQSP PQNCSRSNCK IS

References

[1]	"Sequencing of E. coli expression clones for human proteins." Sievert V., Buessow K. Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Brain EMBL AAV83924.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY823398 mRNA. Translation: AAV83924.1.
IPI	IPI00956103.
RefSeq	NP_001166137.1. NM_001172666.1.
UniGene	Hs.459630.
3D structure databases
ProteinModelPortal	Q5PXE8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5PXE8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	57799.
KEGG	hsa:57799.
UCSC	uc002chq.1. human.
Organism-specific databases
CTD	57799.
PharmGKB	PA34139.
Phylogenomic databases
HOVERGEN	HBG009351.
Gene expression databases
ArrayExpress	Q5PXE8.
Bgee	Q5PXE8.
Family and domain databases
InterPro	IPR005225. Small_GTP-bd_dom. IPR001806. Small_GTPase. IPR003579. Small_GTPase_Rab_type. IPR001496. SOCS_C. [Graphical view]
KO	K07928.
Pfam	PF00071. Ras. 1 hit. PF07525. SOCS_box. 1 hit. [Graphical view]
PRINTS	PR00449. RASTRNSFRMNG.
SMART	SM00175. RAB. 1 hit. SM00253. SOCS. 1 hit. SM00969. SOCS_box. 1 hit. [Graphical view]
TIGRFAMs	TIGR00231. Small_GTP. 1 hit.
PROSITE	PS50225. SOCS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5PXE8_HUMAN

Accession

Primary (citable) accession number: Q5PXE8

Entry history

Integrated into UniProtKB/TrEMBL:	January 4, 2005
Last sequence update:	January 4, 2005
Last modified:	November 16, 2011
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.