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Protein

BTB/POZ domain-containing protein 9

Gene

Btbd9

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
BTB/POZ domain-containing protein 9
Gene namesi
Name:Btbd9
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 20

Organism-specific databases

RGDi1306975. Btbd9.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 612612BTB/POZ domain-containing protein 9PRO_0000356175Add
BLAST

Proteomic databases

PaxDbiQ5PQR3.
PRIDEiQ5PQR3.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000649.

Structurei

3D structure databases

ProteinModelPortaliQ5PQR3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini36 – 10469BTBPROSITE-ProRule annotationAdd
BLAST
Domaini142 – 24099BACKAdd
BLAST

Sequence similaritiesi

Contains 1 BTB (POZ) domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG4350. Eukaryota.
ENOG410Z7D9. LUCA.
GeneTreeiENSGT00550000074511.
HOGENOMiHOG000007577.
HOVERGENiHBG050744.
InParanoidiQ5PQR3.
KOiK10481.
OMAiIINHIRL.
OrthoDBiEOG71P29D.
PhylomeDBiQ5PQR3.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
InterProiIPR011705. BACK.
IPR000210. BTB/POZ_dom.
IPR000421. FA58C.
IPR008979. Galactose-bd-like.
IPR011333. SKP1/BTB/POZ.
[Graphical view]
PfamiPF07707. BACK. 1 hit.
PF00651. BTB. 1 hit.
PF00754. F5_F8_type_C. 2 hits.
[Graphical view]
SMARTiSM00875. BACK. 1 hit.
SM00225. BTB. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF54695. SSF54695. 1 hit.
PROSITEiPS50097. BTB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5PQR3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNSHPLRPF TAVGEIDHVH ILSEHIGALL IGEEYGDVTF VVEKKRFPAH
60 70 80 90 100
RVILAARCQY FRALLYGGMR ESQPEAEIPL QDTTAEAFTM LLRYIYTGRA
110 120 130 140 150
TLTDEKEEVL LDFLSLAHKY GFPELEDSTS EYLCTILNIQ NVCMTFDVAS
160 170 180 190 200
LYSLPKLTCM CCMFMDRNAQ EVLASDGFLS LSKTALLNIV LRDSFAAPEK
210 220 230 240 250
DIFLALLNWC KHNAKENHAE IMQAVRLPLM SLTELLNVVR PSGLLSPDAI
260 270 280 290 300
LDAIKVRSES RDMDLNYRGM LIPEENIATM KYGAQVVKGE LKSALLDGDT
310 320 330 340 350
QNYDLDHGFS RHPIDDDCRS GIEIKLGQPS IINHIRLLLW DRDSRSYSYF
360 370 380 390 400
IEVSMDELDW IRVIDHSHYL CRSWQKLYFP ARVCRYIRIV GTHNTVNKIF
410 420 430 440 450
HIVAFECMFT NKAFTLEKGL IAPMENVATI ADCASVIEGV SRSRNALLNG
460 470 480 490 500
DTKNYDWDSG YTCHQLGSGA IVVQLAQPYM IGSIRLLLWD CDDRSYSYYV
510 520 530 540 550
EVSTNQQQWT MVADRTKVSC KSWQSVTFER QPASFIRIVG THNTANEVFH
560 570 580 590 600
CVHFECPEQQ STQKEDSSEE PGTGDLSTPS QQLDPHAPRA PSASSLPPSP
610
GPNLHSPNQQ NQ
Length:612
Mass (Da):69,158
Last modified:January 4, 2005 - v1
Checksum:i668A012D97B3B434
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087068 mRNA. Translation: AAH87068.1.
RefSeqiNP_001013091.1. NM_001013073.1.
XP_006256247.1. XM_006256185.2.
UniGeneiRn.48897.

Genome annotation databases

EnsembliENSRNOT00000000649; ENSRNOP00000000649; ENSRNOG00000000540.
GeneIDi294318.
KEGGirno:294318.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087068 mRNA. Translation: AAH87068.1.
RefSeqiNP_001013091.1. NM_001013073.1.
XP_006256247.1. XM_006256185.2.
UniGeneiRn.48897.

3D structure databases

ProteinModelPortaliQ5PQR3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000649.

Proteomic databases

PaxDbiQ5PQR3.
PRIDEiQ5PQR3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000000649; ENSRNOP00000000649; ENSRNOG00000000540.
GeneIDi294318.
KEGGirno:294318.

Organism-specific databases

CTDi114781.
RGDi1306975. Btbd9.

Phylogenomic databases

eggNOGiKOG4350. Eukaryota.
ENOG410Z7D9. LUCA.
GeneTreeiENSGT00550000074511.
HOGENOMiHOG000007577.
HOVERGENiHBG050744.
InParanoidiQ5PQR3.
KOiK10481.
OMAiIINHIRL.
OrthoDBiEOG71P29D.
PhylomeDBiQ5PQR3.

Miscellaneous databases

PROiQ5PQR3.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
InterProiIPR011705. BACK.
IPR000210. BTB/POZ_dom.
IPR000421. FA58C.
IPR008979. Galactose-bd-like.
IPR011333. SKP1/BTB/POZ.
[Graphical view]
PfamiPF07707. BACK. 1 hit.
PF00651. BTB. 1 hit.
PF00754. F5_F8_type_C. 2 hits.
[Graphical view]
SMARTiSM00875. BACK. 1 hit.
SM00225. BTB. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF54695. SSF54695. 1 hit.
PROSITEiPS50097. BTB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.

Entry informationi

Entry nameiBTBD9_RAT
AccessioniPrimary (citable) accession number: Q5PQR3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 16, 2008
Last sequence update: January 4, 2005
Last modified: June 8, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.