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Protein

LIX1-like protein

Gene

Lix1l

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
LIX1-like protein
Gene namesi
Name:Lix1l
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1593161. Lix1l.

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002328741 – 338LIX1-like proteinAdd BLAST338

Proteomic databases

PaxDbiQ5PQQ7.

PTM databases

iPTMnetiQ5PQQ7.
PhosphoSitePlusiQ5PQQ7.

Expressioni

Gene expression databases

BgeeiENSRNOG00000021213.
GenevisibleiQ5PQQ7. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000053080.

Structurei

3D structure databases

SMRiQ5PQQ7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the LIX1 family.Curated

Phylogenomic databases

eggNOGiENOG410IH13. Eukaryota.
ENOG410XRZR. LUCA.
GeneTreeiENSGT00390000005869.
HOGENOMiHOG000237359.
HOVERGENiHBG079509.
InParanoidiQ5PQQ7.
KOiK16673.
OMAiDMRTQMA.
OrthoDBiEOG091G0KAJ.
PhylomeDBiQ5PQQ7.

Family and domain databases

InterProiView protein in InterPro
IPR029270. LIX1.
PfamiView protein in Pfam
PF14954. LIX1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5PQQ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METMRAQRLQ PGVGVGGRGT LRALRPGVTG APTSAATPPA GPPPAPPPPA
60 70 80 90 100
PPPPPLLLAG APGLPLPPGA TGSPAVLREA VEAVVRSFAK HTQGYGRAVN
110 120 130 140 150
VVEALQEFWQ MKQSRGADLK NGALVVYEMV PSNSPPYVCY VTLPGGSCFG
160 170 180 190 200
SFQFCPTKAE ARRSAAKIAL MNSVFNEHPS RRITDEFIEK SVSEALASFN
210 220 230 240 250
GNREEADNPN TGIGAFRFML ESNKGKSMLE FQELMTVFQL LHWNGSLKAM
260 270 280 290 300
RERQCSRQEV LAHYSHRALD DDIRHQMALD WVSREQSVPG ALSRELASTE
310 320 330
RELDEARLAG KELRFHKEKK DILMLAAGQL GNMHSSSC
Length:338
Mass (Da):36,663
Last modified:January 4, 2005 - v1
Checksum:iA312122B7A44F435
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087077 mRNA. Translation: AAH87077.1.
RefSeqiNP_001019474.1. NM_001024303.1.
UniGeneiRn.3632.

Genome annotation databases

EnsembliENSRNOT00000056237; ENSRNOP00000053080; ENSRNOG00000021213.
GeneIDi499677.
KEGGirno:499677.
UCSCiRGD:1593161. rat.

Similar proteinsi

Entry informationi

Entry nameiLIX1L_RAT
AccessioniPrimary (citable) accession number: Q5PQQ7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 18, 2006
Last sequence update: January 4, 2005
Last modified: May 10, 2017
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families