Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q5PQP9 (ARMC5_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified March 6, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Armadillo repeat-containing protein 5
Gene names
Name:Armc5
OrganismRattus norvegicus (Rat) [Reference proteome]
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length926 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 7 ARM repeats.

Contains 1 BTB (POZ) domain.

Ontologies

Keywords
   DomainRepeat
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 926926Armadillo repeat-containing protein 5
PRO_0000284407

Regions

Repeat139 – 17941ARM 1
Repeat181 – 22141ARM 2
Repeat223 – 26341ARM 3
Repeat267 – 30640ARM 4
Repeat307 – 35448ARM 5
Repeat355 – 39945ARM 6
Repeat401 – 44040ARM 7
Domain745 – 81369BTB
Compositional bias328 – 3314Poly-Arg
Compositional bias422 – 4265Poly-Glu
Compositional bias523 – 5264Poly-Leu

Amino acid modifications

Modified residue3371Phosphoserine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5PQP9 [UniParc].

Last modified January 4, 2005. Version 1.
Checksum: 80B010EBFD838C90

FASTA92696,585
        10         20         30         40         50         60 
MAAARPALTD SLSFCLAQLT AAAGEGPGGG KDPATNETAL GRVLLALRTR HIKAAEGIER 

        70         80         90        100        110        120 
FRARGGLRPL VALLRRTAAA GPAPSQAASG SAPPSVASAG SSPGPAPAAE SPLTLSAPMR 

       130        140        150        160        170        180 
LRKTLDLALS ILANCCTEGA CRSEVRRIGG ILPLVTILQC VRIDSIQNRT ARALGNLAME 

       190        200        210        220        230        240 
PESCGDIHSA GAVPFLVESL TACQDSQCLQ SIVRALRNLA DSPQHRLALA QQGAVRPLAE 

       250        260        270        280        290        300 
LLATAPDPAL TSALVRALLE LSRGCSRACA EQLSLGGGLG PLVSLASHPK RAIREAAILI 

       310        320        330        340        350        360 
LANLCAQGLV RPALGNAGGV EVLLGELRRR RGPSGSSSAS QQPLVRAVCL LCREAINRAR 

       370        380        390        400        410        420 
LRDAGGLELL MGLLQDPGAS AWHPRVVAAL VGFLYDTGAL GKLQALGLVP LLARQLCGEA 

       430        440        450        460        470        480 
GEEEEEGVEA ASWDFPEERT SGQPEGGSFR SLRLWLISEG YAAGPGDISP DWSPERCPMP 

       490        500        510        520        530        540 
EPSESVSPTP GQTSMSTPRT LRKLGRVPAA TTEEPWGQEG PALLLLSRFS QAPDPSGALV 

       550        560        570        580        590        600 
TGPALCGLLA YVTGAPGPPN PRALRILARL TCNPACLEAF VRSYGAALLR AWLVLGVSPD 

       610        620        630        640        650        660 
DWPVPHARPV HRSQHRELGE MLLQNLTVQA ESPFGVGALT HLLLSGSPED RVACALTVPF 

       670        680        690        700        710        720 
ICRKPTLWRR LLLDQGGLRL LLTALTQPAP HPLFLFFAAD SLSCLQGLVS PSASPVPLPD 

       730        740        750        760        770        780 
LPLELDSPSP CLYKPLLGPA PAPAPDLHFV LDSGLQLPAQ RAASAAASPF FRALLSGSFA 

       790        800        810        820        830        840 
EAQMNLVPLR GLSPSAAWPV LHHLHGCRGC GAALGPIPPP GQPLLGSKAE EALEAAGRFL 

       850        860        870        880        890        900 
LPALEEELEE AVGRIHLSPQ GGPESVGEVF RLGRPRLAAH CARWTLEPGQ CPRKRALALT 

       910        920 
GLVEAAGEEA GPLTEALLAV VMGVES

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Heart.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC087086 mRNA. Translation: AAH87086.1.
IPIIPI00197872.
RefSeqNP_001009455.1. NM_001009455.1.
UniGeneRn.15020.

3D structure databases

ProteinModelPortalQ5PQP9.
ModBaseSearch...

Proteomic databases

PRIDEQ5PQP9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000027032; ENSRNOP00000027032; ENSRNOG00000019935.
GeneID361653.
KEGGrno:361653.
UCSCRGD:1306553. rat.

Organism-specific databases

CTD79798.
RGD1306553. Armc5.

Phylogenomic databases

eggNOGNOG39191.
GeneTreeENSGT00390000009109.
HOGENOMHOG000034055.
HOVERGENHBG055351.
InParanoidQ5PQP9.
OMAVTILQCV.
OrthoDBEOG4W3SMH.

Gene expression databases

GenevestigatorQ5PQP9.

Family and domain databases

Gene3D1.25.10.10. 3 hits.
3.30.710.10. 1 hit.
InterProIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR000225. Armadillo.
IPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
[Graphical view]
SMARTSM00185. ARM. 4 hits.
[Graphical view]
SUPFAMSSF48371. ARM-type_fold. 1 hit.
PROSITEPS50176. ARM_REPEAT. False negative.
PS50097. BTB. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio677104.

Entry information

Entry nameARMC5_RAT
AccessionPrimary (citable) accession number: Q5PQP9
Entry history
Integrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: January 4, 2005
Last modified: March 6, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents