Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Immediate early response gene 5-like protein

Gene

Ier5l

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Immediate early response gene 5-like protein
Gene namesi
Name:Ier5l
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1561058. Ier5l.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 409409Immediate early response gene 5-like proteinPRO_0000334658Add
BLAST

Proteomic databases

PaxDbiQ5PQP0.

PTM databases

PhosphoSiteiQ5PQP0.

Expressioni

Gene expression databases

GenevisibleiQ5PQP0. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000060846.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi59 – 13274Gln-richAdd
BLAST
Compositional biasi169 – 24880Pro-richAdd
BLAST

Sequence similaritiesi

Belongs to the IER family.Curated

Phylogenomic databases

eggNOGiENOG410J77W. Eukaryota.
ENOG410YHIY. LUCA.
GeneTreeiENSGT00730000111126.
HOGENOMiHOG000112999.
HOVERGENiHBG107988.
InParanoidiQ5PQP0.
OMAiARFEDFC.
OrthoDBiEOG7XH6R3.
PhylomeDBiQ5PQP0.
TreeFamiTF331376.

Family and domain databases

InterProiIPR008653. IER.
[Graphical view]
PANTHERiPTHR15895. PTHR15895. 2 hits.
PfamiPF05760. IER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5PQP0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MECALDAQSL ISISLRKIHS SRTQRGGIKL HKNLLVSYVL RNARQLYLSE
60 70 80 90 100
RYAELYRRQQ QQQQQQQQPP HHQHQHLAYA APGMPASAAD FGPLQLGGGG
110 120 130 140 150
DAEAREPVAR HQLHQLHQLH QLHLQQQLHQ HQHPAPRGCT AAAPVAVAGA
160 170 180 190 200
PAGCAGALSE LPGCAALQPP HGAPHRGQHL EPLQPGPAPL PPPAPAALCP
210 220 230 240 250
RDPRVPAACS APSAPPGAAP PTVAASSPPA SPAPSSSPGF YRGAYPAPSD
260 270 280 290 300
FGVHCSSQTT VLDLDTHVVT TVENGYLHQD CCASAHCPCC GQGAPGPGLA
310 320 330 340 350
SAAGCKRKYY PGQEEEDDEE EDAGDLGAEP PGGTPFAPCK RARFEDFCPD
360 370 380 390 400
SSPDASNISN LISIFGSGFS GLVSRQPDSS EQPPPLNGQL CAKQALASLG

AWTRAIVAF
Length:409
Mass (Da):42,873
Last modified:January 4, 2005 - v1
Checksum:iB43E85B7C1412045
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087095 mRNA. Translation: AAH87095.1.
RefSeqiNP_001020212.1. NM_001025041.1.
UniGeneiRn.162656.

Genome annotation databases

EnsembliENSRNOT00000036770; ENSRNOP00000060846; ENSRNOG00000024846.
GeneIDi499772.
KEGGirno:499772.
UCSCiRGD:1561058. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087095 mRNA. Translation: AAH87095.1.
RefSeqiNP_001020212.1. NM_001025041.1.
UniGeneiRn.162656.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000060846.

PTM databases

PhosphoSiteiQ5PQP0.

Proteomic databases

PaxDbiQ5PQP0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000036770; ENSRNOP00000060846; ENSRNOG00000024846.
GeneIDi499772.
KEGGirno:499772.
UCSCiRGD:1561058. rat.

Organism-specific databases

CTDi389792.
RGDi1561058. Ier5l.

Phylogenomic databases

eggNOGiENOG410J77W. Eukaryota.
ENOG410YHIY. LUCA.
GeneTreeiENSGT00730000111126.
HOGENOMiHOG000112999.
HOVERGENiHBG107988.
InParanoidiQ5PQP0.
OMAiARFEDFC.
OrthoDBiEOG7XH6R3.
PhylomeDBiQ5PQP0.
TreeFamiTF331376.

Miscellaneous databases

PROiQ5PQP0.

Gene expression databases

GenevisibleiQ5PQP0. RN.

Family and domain databases

InterProiIPR008653. IER.
[Graphical view]
PANTHERiPTHR15895. PTHR15895. 2 hits.
PfamiPF05760. IER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Heart.

Entry informationi

Entry nameiIER5L_RAT
AccessioniPrimary (citable) accession number: Q5PQP0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: January 4, 2005
Last modified: June 8, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.