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Protein

Transcription elongation factor A protein-like 1

Gene

Tceal1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May be involved in transcriptional regulation. Modulates various viral and cellular promoters in a promoter context-dependent manner. Does not bind DNA directly (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription elongation factor A protein-like 1
Short name:
TCEA-like protein 1
Alternative name(s):
Transcription elongation factor S-II protein-like 1
Gene namesi
Name:Tceal1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi1549724 Tceal1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002392051 – 165Transcription elongation factor A protein-like 1Add BLAST165

Proteomic databases

PaxDbiQ5PPP3
PRIDEiQ5PPP3

Expressioni

Gene expression databases

BgeeiENSRNOG00000002387
GenevisibleiQ5PPP3 RN

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

BioGridi257245, 1 interactor
STRINGi10116.ENSRNOP00000049958

Family & Domainsi

Sequence similaritiesi

Belongs to the TFS-II family. TFA subfamily.Curated

Phylogenomic databases

eggNOGiENOG410JCA0 Eukaryota
ENOG41115IA LUCA
GeneTreeiENSGT00730000111084
HOGENOMiHOG000231344
HOVERGENiHBG094029
InParanoidiQ5PPP3
OMAiERPPMEQ
OrthoDBiEOG091G13IU
PhylomeDBiQ5PPP3
TreeFamiTF336871

Family and domain databases

InterProiView protein in InterPro
IPR010370 TCEAL1
IPR021156 TF_A-like/BEX
PANTHERiPTHR14754:SF12 PTHR14754:SF12, 1 hit
PfamiView protein in Pfam
PF04538 BEX, 1 hit

Sequencei

Sequence statusi: Complete.

Q5PPP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENSHNESEE QPQSTPKVEE EQPAVEQSPE NQCSEDDQSS EDLSSEEQSS
60 70 80 90 100
DEEFFPEELL PELLPEMLLC EDRPPQECLP QKNAFEDRIP MEQPPCGIGK
110 120 130 140 150
HKLEEGSFKE RLARSRPQFR GDIHGRNLSN EEMIRAADEL EEMKRVRNKL
160
MIMHWKAKRS RPYPI
Length:165
Mass (Da):19,262
Last modified:January 4, 2005 - v1
Checksum:i6DCDBF4D1BF2B341
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087575 mRNA Translation: AAH87575.1
RefSeqiNP_001009675.1, NM_001009675.1
XP_008771635.1, XM_008773413.2
XP_008771636.1, XM_008773414.1
UniGeneiRn.41329

Genome annotation databases

EnsembliENSRNOT00000044372; ENSRNOP00000049958; ENSRNOG00000002387
GeneIDi302593
KEGGirno:302593
UCSCiRGD:1549724 rat

Similar proteinsi

Entry informationi

Entry nameiTCAL1_RAT
AccessioniPrimary (citable) accession number: Q5PPP3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: January 4, 2005
Last modified: March 28, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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