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Q5PPN2 (RPP25_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribonuclease P protein subunit p25

Short name=RNase P protein subunit p25
EC=3.1.26.5
Gene names
Name:Rpp25
OrganismRattus norvegicus (Rat) [Reference proteome]
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP. This subunit binds to RNA By similarity.

Catalytic activity

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

Subunit structure

Component of nuclear RNase P and RNase MRP ribonucleoproteins. RNase P consists of an RNA moiety and at least 8 protein subunits; POP1, RPP14, RPP20/POP7, RPP25, RPP29/POP4, RPP30, RPP38 and RPP40. Interacts with the P3 domain of RNase MRP complex. RNase MRP consists of an RNA moiety and at least 9 protein subunits; POP1, RPP14, RPP20/POP7, RPP25, RPP29/POP4, RPP30, RPP38, RPP40, POP5 and RPP21 By similarity.

Subcellular location

Nucleus By similarity.

Sequence similarities

Belongs to the histone-like Alba family.

Ontologies

Keywords
   Biological processtRNA processing
   Cellular componentNucleus
   LigandRNA-binding
   Molecular functionHydrolase
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtRNA processing

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentcentrosome

Inferred from electronic annotation. Source: Ensembl

mitochondrion

Inferred from electronic annotation. Source: Ensembl

nucleus

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

ribonuclease P activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 199199Ribonuclease P protein subunit p25
PRO_0000237584

Amino acid modifications

Modified residue1721Phosphoserine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5PPN2 [UniParc].

Last modified January 4, 2005. Version 1.
Checksum: FF0CF2AD99BB5BB0

FASTA19920,939
        10         20         30         40         50         60 
MENFRKVRSE EAPAGDGDEG GSPSSGPFAD LAPGAVHMRV KEGSKIRNLL AFATASMAQP 

        70         80         90        100        110        120 
ATRAIVFSGC GRATTKTVTC AEILKRRLAG LHQVTRLRYR SVREVWQSLP PGPTPGQTPS 

       130        140        150        160        170        180 
DPAASLSVLK NVPSLAILLS KDALDPRQLG YQPPNLSPGP SSPPTVSTSK RSLGESAAGE 

       190 
GTAKRSQPEP EAENEDRTA 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Ovary.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC087592 mRNA. Translation: AAH87592.1.
RefSeqNP_001012124.1. NM_001012124.1.
UniGeneRn.13924.

3D structure databases

ProteinModelPortalQ5PPN2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000025408.

PTM databases

PhosphoSiteQ5PPN2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000025410; ENSRNOP00000025408; ENSRNOG00000018812.
GeneID315705.
KEGGrno:315705.
UCSCRGD:1305290. rat.

Organism-specific databases

CTD54913.
RGD1305290. Rpp25.

Phylogenomic databases

eggNOGNOG247262.
GeneTreeENSGT00390000002564.
HOGENOMHOG000231665.
HOVERGENHBG056729.
InParanoidQ5PPN2.
KOK14525.
OMAMENFRKV.
OrthoDBEOG7XM309.
PhylomeDBQ5PPN2.
TreeFamTF325688.

Gene expression databases

GenevestigatorQ5PPN2.

Family and domain databases

Gene3D3.30.110.20. 1 hit.
InterProIPR002775. DNA/RNA-bd_Alba-like.
[Graphical view]
PfamPF01918. Alba. 1 hit.
[Graphical view]
SUPFAMSSF82704. SSF82704. 1 hit.
ProtoNetSearch...

Other

NextBio669696.
PROQ5PPN2.

Entry information

Entry nameRPP25_RAT
AccessionPrimary (citable) accession number: Q5PPN2
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: January 4, 2005
Last modified: May 14, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families