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Q5PPK3

- Q5PPK3_RAT

UniProt

Q5PPK3 - Q5PPK3_RAT

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Protein
Submitted name: Gart protein
Gene
Gart
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. metal ion binding Source: InterPro
  3. phosphoribosylamine-glycine ligase activity Source: RGD
  4. phosphoribosylformylglycinamidine cyclo-ligase activity Source: RGD
  5. phosphoribosylglycinamide formyltransferase activity Source: RGD

GO - Biological processi

  1. brainstem development Source: RGD
  2. cerebellum development Source: RGD
  3. cerebral cortex development Source: RGD
  4. cobalamin metabolic process Source: RGD
  5. glycine metabolic process Source: RGD
  6. purine nucleobase biosynthetic process Source: InterPro
  7. response to inorganic substance Source: RGD
  8. response to organic substance Source: RGD
  9. ribonucleoside monophosphate biosynthetic process Source: RGD
  10. tetrahydrofolate biosynthetic process Source: RGD
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_217264. Purine ribonucleoside monophosphate biosynthesis.

Names & Taxonomyi

Protein namesi
Submitted name:
Gart proteinImported
Gene namesi
Name:GartImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1308717. Gart.

PTM / Processingi

Proteomic databases

PRIDEiQ5PPK3.

Expressioni

Gene expression databases

GenevestigatoriQ5PPK3.

Structurei

3D structure databases

ProteinModelPortaliQ5PPK3.
SMRiQ5PPK3. Positions 1-430.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG053903.
InParanoidiQ5PPK3.
PhylomeDBiQ5PPK3.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
3.40.50.20. 1 hit.
3.90.600.10. 1 hit.
HAMAPiMF_00138. GARS.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR016185. PreATP-grasp_dom.
IPR020561. PRibGlycinamid_synth_ATP-grasp.
IPR000115. PRibGlycinamide_synth.
IPR020560. PRibGlycinamide_synth_C-dom.
IPR020559. PRibGlycinamide_synth_CS.
IPR020562. PRibGlycinamide_synth_N.
IPR011054. Rudment_hybrid_motif.
[Graphical view]
PfamiPF01071. GARS_A. 1 hit.
PF02843. GARS_C. 1 hit.
PF02844. GARS_N. 1 hit.
[Graphical view]
SUPFAMiSSF51246. SSF51246. 1 hit.
SSF52440. SSF52440. 1 hit.
TIGRFAMsiTIGR00877. purD. 1 hit.
PROSITEiPS50975. ATP_GRASP. 1 hit.
PS00184. GARS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5PPK3-1 [UniParc]FASTAAdd to Basket

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MAARVLVIGS GGREHTLAWK LAQSPHVKQV LVAPGNAGTA SAGKISNAAV    50
SINDHTALAR FCKDEKIELV VVGPEAPLAA GIVGDLTSAG VRCFGPTAQA 100
ALLESSKKFA KEFMDRHGVP TAQWRAFTSP EDACSFIMSA DFPALVVKAS 150
GLAAGKGVIV AKSKAEACEA VQEIMQEKSF GAAGETVVVE ELLEGEEVSC 200
LCFTDGKTVA PMPPAQDHKR LLDGDRGPNT GGMGAYCPAP QVPKDLLVKI 250
KNTILQRTVD GMQQEGVPYT GILYAGIMLT KDGPKVLEFN CRFGDPECQV 300
ILPLLKSDLY EVIQSTFDGL LSESPPVWLE NHSAVTVVMA SGGYPGAYTK 350
GVEITGFPEA QALGLQVFHA GTALKDAKVV TSGGRVLTVT AVRENLMSAL 400
DEARKGLAAL KFEGAVYRKD IGFRAVAFLQ RPR 433
Length:433
Mass (Da):45,711
Last modified:January 4, 2005 - v1
Checksum:iBB01FCA60E0BE3FB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC087644 mRNA. Translation: AAH87644.1.
UniGeneiRn.55532.

Genome annotation databases

UCSCiRGD:1308717. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC087644 mRNA. Translation: AAH87644.1 .
UniGenei Rn.55532.

3D structure databases

ProteinModelPortali Q5PPK3.
SMRi Q5PPK3. Positions 1-430.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q5PPK3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi RGD:1308717. rat.

Organism-specific databases

RGDi 1308717. Gart.

Phylogenomic databases

HOVERGENi HBG053903.
InParanoidi Q5PPK3.
PhylomeDBi Q5PPK3.

Enzyme and pathway databases

Reactomei REACT_217264. Purine ribonucleoside monophosphate biosynthesis.

Gene expression databases

Genevestigatori Q5PPK3.

Family and domain databases

Gene3Di 3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
3.40.50.20. 1 hit.
3.90.600.10. 1 hit.
HAMAPi MF_00138. GARS.
InterProi IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR016185. PreATP-grasp_dom.
IPR020561. PRibGlycinamid_synth_ATP-grasp.
IPR000115. PRibGlycinamide_synth.
IPR020560. PRibGlycinamide_synth_C-dom.
IPR020559. PRibGlycinamide_synth_CS.
IPR020562. PRibGlycinamide_synth_N.
IPR011054. Rudment_hybrid_motif.
[Graphical view ]
Pfami PF01071. GARS_A. 1 hit.
PF02843. GARS_C. 1 hit.
PF02844. GARS_N. 1 hit.
[Graphical view ]
SUPFAMi SSF51246. SSF51246. 1 hit.
SSF52440. SSF52440. 1 hit.
TIGRFAMsi TIGR00877. purD. 1 hit.
PROSITEi PS50975. ATP_GRASP. 1 hit.
PS00184. GARS. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.

Entry informationi

Entry nameiQ5PPK3_RAT
AccessioniPrimary (citable) accession number: Q5PPK3
Entry historyi
Integrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: September 3, 2014
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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