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Protein

Zinc finger protein 414

Gene

Znf414

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

May be involved in transcriptional regulation.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri99 – 12325C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri135 – 15925C2H2-type 2PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri166 – 19025C2H2-type 3; degeneratePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein 414
Gene namesi
Name:Znf414
Synonyms:Zfp414
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi1308123. Zfp414.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 299299Zinc finger protein 414PRO_0000242165Add
BLAST

Proteomic databases

PaxDbiQ5PPH4.

Expressioni

Gene expression databases

BgeeiENSRNOG00000008378.
GenevisibleiQ5PPH4. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000011094.

Structurei

3D structure databases

ProteinModelPortaliQ5PPH4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi195 – 26773Pro-richAdd
BLAST

Sequence similaritiesi

Contains 3 C2H2-type zinc fingers.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri99 – 12325C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri135 – 15925C2H2-type 2PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri166 – 19025C2H2-type 3; degeneratePROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00390000006876.
HOGENOMiHOG000015387.
HOVERGENiHBG083015.
InParanoidiQ5PPH4.
OMAiEGECPVF.
OrthoDBiEOG091G0DB2.
PhylomeDBiQ5PPH4.
TreeFamiTF337512.

Family and domain databases

InterProiIPR031799. Znf-C2H2_ribbon.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF15909. zf-C2H2_8. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 3 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5PPH4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEELSGPSSD TLATVESSSN EPDKEVASPD VAATATLSSV EEPGPNPTAT
60 70 80 90 100
PPVWDRGGPL QQVACPVPDS CQTSSTTRGV GTNEDLRLPR RRPPPGKQIP
110 120 130 140 150
CSSPGCSLSF PSVRDLAQHL RTHCPPTQSL EGKLFRCSAL SCTESFPSMQ
160 170 180 190 200
ELVAHGKLHY KPNRYFKCEN CLLRFRTHRS LFKHLHVCID HGQNPAPPPP
210 220 230 240 250
PALDKEPPVP ERPPESDPSS SLGLPFPLLE PFTSAPTGPF LPYLNPAPFG
260 270 280 290
LSPPRLRPFL AATPGPPTSS TAIWKKSQGA TSSPRRPQGG SDAPSGACR
Length:299
Mass (Da):31,967
Last modified:January 4, 2005 - v1
Checksum:i0988FF9C3263345B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087693 mRNA. Translation: AAH87693.1.
RefSeqiNP_001009664.1. NM_001009664.1.
UniGeneiRn.32868.

Genome annotation databases

EnsembliENSRNOT00000011094; ENSRNOP00000011094; ENSRNOG00000008378.
GeneIDi299647.
KEGGirno:299647.
UCSCiRGD:1308123. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087693 mRNA. Translation: AAH87693.1.
RefSeqiNP_001009664.1. NM_001009664.1.
UniGeneiRn.32868.

3D structure databases

ProteinModelPortaliQ5PPH4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000011094.

Proteomic databases

PaxDbiQ5PPH4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000011094; ENSRNOP00000011094; ENSRNOG00000008378.
GeneIDi299647.
KEGGirno:299647.
UCSCiRGD:1308123. rat.

Organism-specific databases

CTDi328801.
RGDi1308123. Zfp414.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00390000006876.
HOGENOMiHOG000015387.
HOVERGENiHBG083015.
InParanoidiQ5PPH4.
OMAiEGECPVF.
OrthoDBiEOG091G0DB2.
PhylomeDBiQ5PPH4.
TreeFamiTF337512.

Miscellaneous databases

PROiQ5PPH4.

Gene expression databases

BgeeiENSRNOG00000008378.
GenevisibleiQ5PPH4. RN.

Family and domain databases

InterProiIPR031799. Znf-C2H2_ribbon.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF15909. zf-C2H2_8. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 3 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiZN414_RAT
AccessioniPrimary (citable) accession number: Q5PPH4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: January 4, 2005
Last modified: September 7, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.