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Protein
Submitted name:

LIM domain only 4

Gene

Lmo4

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
LIM domain only 4Imported
Submitted name:
LIM domain only 4, isoform CRA_aImported
Gene namesi
Name:Lmo4Imported
ORF Names:rCG_28539Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1305670. Lmo4.

Subcellular locationi

GO - Cellular componenti

Expressioni

Gene expression databases

BgeeiENSRNOG00000009205.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000062436.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 83LIM zinc-bindingInterPro annotationAdd BLAST63
Domaini85 – 147LIM zinc-bindingInterPro annotationAdd BLAST63

Keywords - Domaini

LIM domainPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0490. Eukaryota.
ENOG410YIJ3. LUCA.
GeneTreeiENSGT00720000108603.
HOGENOMiHOG000232175.
HOVERGENiHBG054231.
OMAiICENDYS.
TreeFamiTF351071.

Family and domain databases

InterProiView protein in InterPro
IPR001781. Znf_LIM.
PfamiView protein in Pfam
PF00412. LIM. 2 hits.
SMARTiView protein in SMART
SM00132. LIM. 2 hits.
PROSITEiView protein in PROSITE
PS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 2 hits.

Sequencei

Sequence statusi: Complete.

Q5PPG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVNPGSSSQP PPVTAGSLSW KRCAGCGGKI ADRFLLYAMD SYWHSRCLKC
60 70 80 90 100
SCCQAQLGDI GTSCYTKSGM ILCRNDYIRL FGNSGACSAC GQSIPASELV
110 120 130 140 150
MRAQGNVYHL KCFTCSTCRN RLVPGDRFHY INGSLFCEHD RPTALINGHL
160
NSLQSNPLLP DQKVC
Length:165
Mass (Da):17,994
Last modified:January 4, 2005 - v1
Checksum:iC8AC295144AD7787
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07013683 Genomic DNA. No translation available.
AABR07013684 Genomic DNA. No translation available.
BC087700 mRNA. Translation: AAH87700.1.
CH473952 Genomic DNA. Translation: EDL82371.1.
CH473952 Genomic DNA. Translation: EDL82372.1.
CH473952 Genomic DNA. Translation: EDL82373.1.
RefSeqiNP_001009708.1. NM_001009708.1.
XP_006233500.1. XM_006233438.2.
UniGeneiRn.2517.

Genome annotation databases

EnsembliENSRNOT00000067502; ENSRNOP00000062436; ENSRNOG00000009205.
ENSRNOT00000077221; ENSRNOP00000074440; ENSRNOG00000009205.
ENSRNOT00000088618; ENSRNOP00000075489; ENSRNOG00000009205.
GeneIDi362051.
KEGGirno:362051.
UCSCiRGD:1305670. rat.

Similar proteinsi

Entry informationi

Entry nameiQ5PPG8_RAT
AccessioniPrimary (citable) accession number: Q5PPG8
Entry historyiIntegrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: August 30, 2017
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported