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Q5PDL2 (Q5PDL2_SALPA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative glycosyl hydrolase EMBL AAV76077.1
Gene names
Ordered Locus Names:SPA0042
OrganismSalmonella paratyphi A [Complete proteome] [HAMAP]
Taxonomic identifier54388 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella

Protein attributes

Sequence length671 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL AAV76077.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5PDL2 [UniParc].

Last modified January 4, 2005. Version 1.
Checksum: A5856E0B7CC2EC17

FASTA67177,438
        10         20         30         40         50         60 
MPFMQQDPRR LVWQQNDRYL WIEPWGENSL RVRSGRHLPV MRNEDWALTE PVAESQCHID 

        70         80         90        100        110        120 
YEHHQATLTN GKIIAIVNQK GQVTFYRHPH KPLLQEFWRL RGEIGEDESS HGQYVSALNL 

       130        140        150        160        170        180 
EGREFRPIQG GKYSLKARFE ATEGEKIYGM GQYQQANLDL KGCVLELAQR NSQASVPFML 

       190        200        210        220        230        240 
SSLGYGFLWN NPAVGRVTFA QNVTEWEAQV SEQLDYWITA GDTPAEISRA YALATGTPPM 

       250        260        270        280        290        300 
MPDYAMGFWQ CKLRYRTQEE LLEVAREYKR RNLPISVIVI DFFHWPNQGD WMFDARDWPD 

       310        320        330        340        350        360 
PDAMIAELKS LGIELMVSVW PTVDNRTESY REMRENGWLV QTERGLPINM DFLGNTTYFD 

       370        380        390        400        410        420 
ATHPGARDYV WGKAKRNYYD KGVKLFWLDE AEPEFSVYDY DNYRYHAGPV LEVGNIYPRM 

       430        440        450        460        470        480 
YAKTFFDGMK ADGEDQVINL LRCAWAGSQK YGALVWSGDI HSSFRSLRNQ FAAGLNMGIA 

       490        500        510        520        530        540 
GIPWWTTDIG GFHGGNIHDP KFHELLIRWF QWGVFSPVMR LHGNRDPQIL PAQPYRDGIA 

       550        560        570        580        590        600 
QCPTGAPNEV WSYGEEVCDV LTGCLALREK LKPYIKALME ETHKHNTPVM RPLFFEFPEQ 

       610        620        630        640        650        660 
ETSWTITDQY CFGPDLLIAP VMHEGMRERD VWLPEGETWT DLATGKSYSG GQTLHYATPL 

       670 
NRIPVFIREG G

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References

[1]"Comparison of genome degradation in Paratyphi A and Typhi, human-restricted serovars of Salmonella enterica that cause typhoid."
McClelland M., Sanderson K.E., Clifton S.W., Latreille P., Porwollik S., Sabo A., Meyer R., Bieri T., Ozersky P., McLellan M., Harkins C.R., Wang C., Nguyen C., Berghoff A., Elliott G., Kohlberg S., Strong C., Du F. expand/collapse author list , Carter J., Kremizki C., Layman D., Leonard S., Sun H., Fulton L., Nash W., Miner T., Minx P., Delehaunty K., Fronick C., Magrini V., Nhan M., Warren W., Florea L., Spieth J., Wilson R.K.
Nat. Genet. 36:1268-1274(2004) [PubMed: 15531882] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9150 / SARB42.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000026 Genomic DNA. Translation: AAV76077.1.
RefSeqYP_149389.1. NC_006511.1.

3D structure databases

ProteinModelPortalQ5PDL2.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3174674.
GenomeReviewsGene locus SPA0042 in contig CP000026_GR.
KEGGspt:SPA0042.
NMPDRfig|295319.3.peg.259.
PATRIC32349160. VBISalEnt134188_0044.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG329982.
OMAWNNPAIG.
ProtClustDBCLSK873205.

Enzyme and pathway databases

BioCycSENT295319:SPA0042-MONOMER.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR011013. Glyco_hydro-type_carb-bd.
IPR000322. Glyco_hydro_31.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 2 hits.
KOK01811.
PANTHERPTHR22762. Glyco_hydro_31. 1 hit.
PfamPF01055. Glyco_hydro_31. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5PDL2_SALPA
AccessionPrimary (citable) accession number: Q5PDL2
Entry history
Integrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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