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Q5P112 (Q5P112_AROAE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Exodeoxyribonuclease 7 large subunit HAMAP-Rule MF_00378
EC=3.1.11.6 HAMAP-Rule MF_00378
Alternative name(s):
Exodeoxyribonuclease VII large subunit HAMAP-Rule MF_00378
Gene names
Name:xseA HAMAP-Rule MF_00378 EMBL CAI09002.1
Ordered Locus Names:AZOSEA28770
ORF Names:ebA5078 EMBL CAI09002.1
OrganismAromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)) [Complete proteome] [HAMAP]
Taxonomic identifier76114 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Aromatoleum ›

Protein attributes

Sequence length458 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides By similarity. HAMAP-Rule MF_00378 SAAS SAAS025824

Catalytic activity

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates. HAMAP-Rule MF_00378

Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates. SAAS SAAS025824

Subunit structure

Heterooligomer composed of large and small subunits By similarity. HAMAP-Rule MF_00378 SAAS SAAS025824

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00378 SAAS SAAS025824.

Sequence similarities

Belongs to the XseA family. HAMAP-Rule MF_00378

Sequences

Sequence LengthMass (Da)Tools
Q5P112 [UniParc].

Last modified January 4, 2005. Version 1.
Checksum: 3EEA1138040AEAA2

FASTA45850,065
        10         20         30         40         50         60 
MQTELPHGDG DPCRLPSAGH VLSVAELNRL ARQTLESRFP LLWVGGELSN LTRAPSGHLY 

        70         80         90        100        110        120 
FTLKDAQAQV RCTMWRNRAQ LLPFRPENGM RVEARALVTL YEVRGDFQLG IEALRQAGVG 

       130        140        150        160        170        180 
NLFETFVRLK DRLAGEGLFD AALKRALPRY PRRLGVVTSP AAAAWHDVLA TLRRRAPHLE 

       190        200        210        220        230        240 
VVLYPAPVQG EAARTRLAEA VRVASARAAT DGIDLLLLVR GGGGIEDLWA FNDENLARAI 

       250        260        270        280        290        300 
RACPVPVVSG IGHETDFTIA DFAADLRAAT PTGAAELASA GYHEACARLT SLGRTLSAAL 

       310        320        330        340        350        360 
HYRLDTLAQR LDRAALRLVH PRERLAVAHE RTARLGVRLA AAMSRRLERL HARNEQLCLR 

       370        380        390        400        410        420 
LEARRPDIDR EAERCARLAN RLVLAADRLI DRQSARLEGL AAHLQHLAPH AVLARGYSIT 

       430        440        450 
RDAQGHILRT SAGVGSGEKV SVELATGRLH ATVNSTDA

« Hide

References

[1]"The genome sequence of an anaerobic aromatic-degrading denitrifying bacterium, strain EbN1."
Rabus R., Kube M., Heider J., Beck A., Heitmann K., Widdel F., Reinhardt R.
Arch. Microbiol. 183:27-36(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EbN1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CR555306 Genomic DNA. Translation: CAI09002.1.
RefSeqYP_159903.1. NC_006513.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING76114.ebA5078.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAI09002; CAI09002; ebA5078.
GeneID3181698.
KEGGeba:ebA5078.
PATRIC20971960. VBIAroAro98752_2908.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1570.
HOGENOMHOG000229265.
KOK03601.
OMAHGSGHAY.
ProtClustDBCLSK766914.

Enzyme and pathway databases

BioCycAARO76114:GJTA-2918-MONOMER.

Family and domain databases

HAMAPMF_00378. Exonuc_7_L.
InterProIPR003753. Exonuc_VII_L.
IPR020579. Exonuc_VII_lsu_C.
IPR025824. OB-fold_nuc-bd_dom.
[Graphical view]
PfamPF02601. Exonuc_VII_L. 1 hit.
PF13742. tRNA_anti_2. 1 hit.
[Graphical view]
TIGRFAMsTIGR00237. xseA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5P112_AROAE
AccessionPrimary (citable) accession number: Q5P112
Entry history
Integrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: May 1, 2013
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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