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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ebA6655

Organism
Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1))
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciAARO76114:G1GHY-3748-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
ORF Names:ebA6655Imported
OrganismiAromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1))Imported
Taxonomic identifieri76114 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAromatoleum
Proteomesi
  • UP000006552 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi76114.ebA6655

Structurei

3D structure databases

ProteinModelPortaliQ5NYD8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini173 – 296DNA_LIGASE_A3InterPro annotationAdd BLAST124

Phylogenomic databases

eggNOGiENOG4105DQE Bacteria
COG1793 LUCA
COG3285 LUCA
HOGENOMiHOG000222509
KOiK01971
OMAiQEFVICG
OrthoDBiPOG091H0AZ9

Family and domain databases

CDDicd04862 PaeLigD_Pol_like, 1 hit
InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR014144 LigD_PE_domain
IPR014145 LigD_pol_dom
IPR012340 NA-bd_OB-fold
IPR014143 NHEJ_ligase_prk
IPR033651 PaeLigD_Pol-like
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF13298 LigD_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02777 LigD_PE_dom, 1 hit
TIGR02778 ligD_pol, 1 hit
TIGR02779 NHEJ_ligase_lig, 1 hit
TIGR02776 NHEJ_ligase_prk, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

Q5NYD8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRSESDKAR AGDPLARYRA MRDFGTTPEP GGDTVAVKAG DGPTFTVQRH
60 70 80 90 100
AARRLHYDFR LELDGVLKSW AAPKGPSLDP SERRLAVETE DHPLDYGDFE
110 120 130 140 150
GVIPARQYGA GEVVLWDRGR WSTDNGQDWT HRMPQLVTAL AALQLDDSWL
160 170 180 190 200
DGEIVVNGDD GLPDFQALQN AFAQGASGRI VYYLFDAPWL SGDELAALPL
210 220 230 240 250
VERKHRLAAA LAGGEGGASV YSEHFAGDVG AALEQACHLG LEGLIGKRGD
260 270 280 290 300
ARYGSGRSCS WIKLKCRPRQ EFVIGGYTEP GGAREGFGAL LVGLYDDAGA
310 320 330 340 350
LNYAGKVGTG FDRETLERLA RQLAALERKD SPFARKPRGA GQHWVRPALV
360 370 380 390 400
AEVEYAGWTR DNLLRQAAFA GLREDKPANT VQDEIPLSPQ VAAEMEQPPS
410 420 430 440 450
QAKSPRRQKK KPSTERGGPA KPRASSESGE VRVAGIVITH PERVVWPDAG
460 470 480 490 500
LTKADLARYY EDIAPWLLPH VASRPLSLLR CPDGSEAECF FQRHMGQERP
510 520 530 540 550
DGVESFIWEA SSKDRRSYLY VTSLEGVIGM VQRGVVEFHT WGSTMPRADR
560 570 580 590 600
PDRITIDLDP GPELAWARVV EAAQLVRGLL GELGIASFVK TTGGKGLHVV
610 620 630 640 650
VPLRRGPQWA DVKRFAKAVA THLARILPDR FTANMARNQR AGRIFVDYLR
660 670 680 690 700
NDAGASAICA YAARARPGAP VSTPLAWDEL GPELKPGAFT VLTVADRLAR
710 720 730 740
LREDPWRDYA KQRFVLTGKM WEALGETPPR KTPNQAEQRH SD
Length:742
Mass (Da):81,444
Last modified:January 4, 2005 - v1
Checksum:i2E1A1DB34F7940B3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR555306 Genomic DNA Translation: CAI09926.1
RefSeqiWP_011239577.1, NC_006513.1

Genome annotation databases

EnsemblBacteriaiCAI09926; CAI09926; ebA6655
KEGGieba:ebA6655

Similar proteinsi

Entry informationi

Entry nameiQ5NYD8_AROAE
AccessioniPrimary (citable) accession number: Q5NYD8
Entry historyiIntegrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: May 23, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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