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Q5NV90 (Q5NV90_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:IGLV3-25 HGNC 5908
Synonyms:V2-17 EMBL BAA20890.1
OrganismHomo sapiens (Human) EMBL BAA20890.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length97 AA.
Sequence statusFragment.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region80 – 812Citrate binding PDB 4AIZ

Sites

Binding site361Citrate PDB 4AIZ
Binding site361Sulfate PDB 4AIZ
Binding site611Citrate PDB 4AIZ

Experimental info

Non-terminal residue11 EMBL BAA20890.1
Non-terminal residue971 EMBL BAA20890.1

Sequences

Sequence LengthMass (Da)Tools
Q5NV90 [UniParc].

Last modified January 4, 2005. Version 1.
Checksum: 224CA886FF48A991

FASTA9710,405
        10         20         30         40         50         60 
SYELTQPPSV SVSPGQTARI TCSGDALPKQ YAYWYQQKPG QAPVLVIYKD SERPSGIPER 

        70         80         90 
FSGSSSGTTV TLTISGVQAE DEADYYCQSA DSSGTYP 

« Hide

References

[1]"One-megabase sequence analysis of the human immunoglobulin lambda gene locus."
Kawasaki K., Minoshima S., Nakato E., Shibuya K., Shintani A., Schmeits J.L., Wang J., Shimizu N.
Genome Res. 7:250-261(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Light Chain Amyloidosis Lambda 3 and Lambda 6 Two Different Stories of the Same Phenomenom."
Villalba M.I., Luna O.D., Rudino-Pinera E., Sanchez R., Sanchez-Lopez R., Rojas-Trejo S., Olamendi-Portugal T., Fernandez-Velasco D.A., Becerril B.
Submitted (FEB-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.75 ANGSTROMS) OF 1-96 IN COMPLEX WITH CITRATE AND SULFATE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D86994 Genomic DNA. Translation: BAA20890.1.
UniGeneHs.449585.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4AIZX-ray1.75A/B/C/D1-96[»]
ProteinModelPortalQ5NV90.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9606.ENSP00000374840.

Proteomic databases

PaxDbQ5NV90.
PRIDEQ5NV90.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGNOG119128.
HOGENOMHOG000059537.

Enzyme and pathway databases

ReactomeREACT_160300. Binding and Uptake of Ligands by Scavenger Receptors.
REACT_6900. Immune System.

Gene expression databases

BgeeQ5NV90.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013106. Ig_V-set.
IPR003596. Ig_V-set_subgr.
[Graphical view]
PfamPF07686. V-set. 1 hit.
[Graphical view]
SMARTSM00406. IGv. 1 hit.
[Graphical view]
PROSITEPS50835. IG_LIKE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5NV90_HUMAN
AccessionPrimary (citable) accession number: Q5NV90
Entry history
Integrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: April 16, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.