Q5NPN0 (Q5NPN0_ZYMMO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endonuclease III EMBL AAV89330.1
EC=4.2.99.18 EMBL AAV89330.1

Gene names

Ordered Locus Names:

ZMO0706 EMBL AAV89330.1

Organism

Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) [Complete proteome] [HAMAP] EMBL AAV89330.1

Taxonomic identifier

264203 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Zymomonas › Zymomonas mobilis › Zymomonas mobilis subsp. mobilis

Protein attributes

Sequence length	215 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Endonuclease EMBL AAV89330.1 Hydrolase Lyase EMBL AAV89330.1 Nuclease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	base-excision repair Inferred from electronic annotation. Source: InterPro
Molecular_function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-(apurinic or apyrimidinic site) lyase activity Inferred from electronic annotation. Source: EC endonuclease activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5NPN0 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: 8C7CF86E5473B03D	FASTA	215	24,095
	10 20 30 40 50 60 MTPDSVEEFY RRLAKDNPNP RSELVFKNPY TLLVSVVLSA QATDVSVNKA TEPLFKIVDT 70 80 90 100 110 120 PQQMVDLGED RLKDYIRSIG LYNNKAKNII ALSHILVEKY QGQVPADQKA LEALPGVGRK 130 140 150 160 170 180 TALVVLNVAF NRPTIAVDTH IFRVANRTGL APGKDVRAVE KALEDVTPEK YRLHAHHWLI 190 200 210 LFGRYICKAR KPECLRCFES DLCAAVKETG IPLQS

References

[1]

"The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4." Seo J.S., Chong H., Park H.S., Yoon K.O., Jung C., Kim J.J., Hong J.H., Kim H., Kim J.H., Kil J.I., Park C.J., Oh H.M., Lee J.S., Jin S.J., Um H.W., Lee H.J., Oh S.J., Kim J.Y. , Kang H.L., Lee S.Y., Lee K.J., Kang H.S. Nat. Biotechnol. 23:63-68(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 31821 / ZM4 / CP4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008692 Genomic DNA. Translation: AAV89330.1.
RefSeq	YP_162441.1. NC_006526.2.
3D structure databases
ProteinModelPortal	Q5NPN0.
SMR	Q5NPN0. Positions 1-211.
ModBase	Search...
Protein-protein interaction databases
STRING	264203.ZMO0706.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAV89330; AAV89330; ZMO0706.
GeneID	3188438.
KEGG	zmo:ZMO0706.
PATRIC	32566722. VBIZymMob102260_0667.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000252206.
KO	K10773.
OMA	NNKSKHL.
ProtClustDB	CLSK2524648.
Family and domain databases
Gene3D	1.10.1670.10. 1 hit. 1.10.340.30. 1 hit.
InterPro	IPR011257. DNA_glycosylase. IPR004036. Endonuclease-III_CS2. IPR005759. Endonuclease-III_Nth. IPR003651. Endouclease3_FeS-loop_motif. IPR003265. HhH-GPD_domain. IPR000445. HhH_motif. IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif. IPR023170. HTH_base_excis_C. [Graphical view]
Pfam	PF00633. HHH. 1 hit. PF00730. HhH-GPD. 1 hit. [Graphical view]
PIRSF	PIRSF001435. Nth. 1 hit.
SMART	SM00478. ENDO3c. 1 hit. SM00525. FES. 1 hit. SM00278. HhH1. 1 hit. [Graphical view]
SUPFAM	SSF48150. DNA_glycsylse. 1 hit.
TIGRFAMs	TIGR01083. nth. 1 hit.
PROSITE	PS01155. ENDONUCLEASE_III_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5NPN0_ZYMMO

Accession

Primary (citable) accession number: Q5NPN0

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 2005
Last sequence update:	February 1, 2005
Last modified:	May 29, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)