Q5NPH0 (GLND_ZYMMO) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase
Short name=PII uridylyl-transferase
EC=2.7.7.59

Alternative name(s):
UTase
Uridylyl-removing enzyme

Gene names

Name:	glnD
Ordered Locus Names:	ZMO0766

Organism

Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) [Complete proteome] [HAMAP]

Taxonomic identifier

264203 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Zymomonas › Zymomonas mobilis › Zymomonas mobilis subsp. mobilis

Protein attributes

Sequence length	926 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein By similarity. HAMAP-Rule MF_00277
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP-Rule MF_00277
Sequence similarities	Belongs to the GlnD family.

Ontologies

Keywords
Molecular function	Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 926	926	[Protein-PII] uridylyltransferase HAMAP-Rule MF_00277		PRO_0000231700

Sequences

	Sequence		Length	Mass (Da)
	Q5NPH0 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: A854FC1B043AD4BE	FASTA	926	104,393
	10 20 30 40 50 60 MPVSFLSLAS QPQIIDYPAI KEEIDSIKKV AAGDPVSEYR AVSLVLKQTV LKGREVIAEA 70 80 90 100 110 120 LTRRPHQGRI AALSYAYLTD QIIQLALYAM VGDDEKATDN LVILAVGGYG RGEMALHSDV 130 140 150 160 170 180 DIAFLSRRSP RKAQKKLIES LISLLWDVGL RVSQSHRSLS DMVKMAKKDI TIRTALLESR 190 200 210 220 230 240 YLVGDKALFE EASTRFIQKV VAGSGRDFVA AKLLEWDERH LARGDSRYLV EPHLKEGKGG 250 260 270 280 290 300 LRDLQSLFWI AKYLYLEKEA RHTVLTSPIL TDYALVKADL IAGHEAKRFR RCENFLWAVR 310 320 330 340 350 360 CHLHILVKRP EERLNFDVQR SLAEKMGYRS KSGKSAVERF MHHYFLVTKM VGNLAALFID 370 380 390 400 410 420 ALKVNHYLKP KSRRSGASKQ IDGFPVIQGE IVLDDDFFFR HNPAALITLF AVAYRHRLDI 430 440 450 460 470 480 HPLTLRQAGR DARLIDEALQ NNPVCNAAFL TLFTLPYNPA PILKIMNNTG VLGRFIPDFG 490 500 510 520 530 540 RIVAQMQFDM YHHYTVDEHA IRALDILWQI ENNKLEDLYP LGSRLFKQLN ARLVLYMALF 550 560 570 580 590 600 LHDIAKGREG SHSALGAEIA LRLCPRFGLT AAETKLVAWL VKNHLLMSHT AFQRDLADAK 610 620 630 640 650 660 TITDFANAVK SPERLRLLYL LTVADISAVG PHIWNSWKNQ LLTSLYEACS QCLLEGPTGH 670 680 690 700 710 720 GAGRQQRIEN RQNDVSEKLD WDNDLFHALV KRLPDDYWFS ERTDVIAANM QQIIDTDSKG 730 740 750 760 770 780 QSISVRGHEM PAYDATMISL YAIDHPGFFY RISGAIHATG GNILDARIHT TRDGMAMDNL 790 800 810 820 830 840 LVQNSQGGMI KSGEHLNRMM QAIEDAATSH IRSSNKLAAL RPPLFWRGKA FHVEPLVFID 850 860 870 880 890 900 NQASDRFTVI EVNAQDRPAL LHDLGCALFN ARLTISSAHI ATYGERAVDV FYVSDLFSHK 910 920 ITNQNRLKAI EKRLLAAADA ARISEK

References

[1]

"The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4." Seo J.-S., Chong H., Park H.S., Yoon K.-O., Jung C., Kim J.J., Hong J.H., Kim H., Kim J.-H., Kil J.-I., Park C.J., Oh H.-M., Lee J.-S., Jin S.-J., Um H.-W., Lee H.-J., Oh S.-J., Kim J.Y. , Kang H.L., Lee S.Y., Lee K.J., Kang H.S. Nat. Biotechnol. 23:63-68(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 31821 / ZM4 / CP4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008692 Genomic DNA. Translation: AAV89390.1.
RefSeq	YP_162501.1. NC_006526.2.
3D structure databases
ProteinModelPortal	Q5NPH0.
ModBase	Search...
Protein-protein interaction databases
STRING	264203.ZMO0766.
Proteomic databases
PRIDE	Q5NPH0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAV89390; AAV89390; ZMO0766.
GeneID	3188782.
KEGG	zmo:ZMO0766.
PATRIC	32566842. VBIZymMob102260_0725.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HOG000261779.
KO	K00990.
OMA	SPKVWNA.
ProtClustDB	PRK05092.
Family and domain databases
Gene3D	1.10.3210.10. 1 hit.
HAMAP	MF_00277. PII_uridylyl-transf.
InterPro	IPR010043. GlnD_Uridyltrans. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
PANTHER	PTHR13734:SF1. PTHR13734:SF1. 1 hit.
Pfam	PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLND_ZYMMO

Accession

Primary (citable) accession number: Q5NPH0

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	February 1, 2005
Last modified:	May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program