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Protein
Submitted name:

Glycerol uptake facilitator protein

Gene

glpF

Organism
Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Biological processTransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator proteinImported
Gene namesi
Name:glpFImported
Ordered Locus Names:FTT_0133Imported
OrganismiFrancisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)Imported
Taxonomic identifieri177416 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella
Proteomesi
  • UP000001174 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 28HelicalSequence analysisAdd BLAST23
Transmembranei40 – 60HelicalSequence analysisAdd BLAST21
Transmembranei80 – 105HelicalSequence analysisAdd BLAST26
Transmembranei139 – 160HelicalSequence analysisAdd BLAST22
Transmembranei180 – 199HelicalSequence analysisAdd BLAST20
Transmembranei226 – 248HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

IntActiQ5NIE2. 1 interactor.
STRINGi177416.FTT_0133.

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105D8C. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiView protein in InterPro
IPR023271. Aquaporin-like.
IPR000425. MIP.
PfamiView protein in Pfam
PF00230. MIP. 1 hit.
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5NIE2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTAFIAELI GTMLLILLGN GVVAGVVLNK TKAHDGGWIV ITFAWGLAVF
60 70 80 90 100
ISVLVAGPIS GAHLNPVVTL SLALAGKFSW AWVLPFIISQ IIGAMLGQLL
110 120 130 140 150
VWIMYYPHYS ATDNPELKLA TCCTSPAIKH LPANFASEVI GTFVLVLAIL
160 170 180 190 200
TMHGVVLHVG DSSITTTYPV DMGALGGIPV AFVVVVIGMS LGGTTGYAIN
210 220 230 240 250
PARDFGPRLF HAIMPIQGKG SSQWSYAWVP ILGPVCGSII ATAFYLLLKV

KGVF
Length:254
Mass (Da):26,775
Last modified:February 1, 2005 - v1
Checksum:i7FC12556B95171CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ749949 Genomic DNA. Translation: CAG44766.1.
RefSeqiWP_003019891.1. NZ_CP010290.1.
YP_169200.1. NC_006570.2.

Genome annotation databases

EnsemblBacteriaiAJI69711; AJI69711; BZ14_750.
CAG44766; CAG44766; FTT_0133.
GeneIDi3192242.
KEGGiftu:FTT_0133.
PATRICi17963248. VBIFraTul2086_0149.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ749949 Genomic DNA. Translation: CAG44766.1.
RefSeqiWP_003019891.1. NZ_CP010290.1.
YP_169200.1. NC_006570.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ5NIE2. 1 interactor.
STRINGi177416.FTT_0133.

Protocols and materials databases

DNASUi3192242.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAJI69711; AJI69711; BZ14_750.
CAG44766; CAG44766; FTT_0133.
GeneIDi3192242.
KEGGiftu:FTT_0133.
PATRICi17963248. VBIFraTul2086_0149.

Phylogenomic databases

eggNOGiENOG4105D8C. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiView protein in InterPro
IPR023271. Aquaporin-like.
IPR000425. MIP.
PfamiView protein in Pfam
PF00230. MIP. 1 hit.
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ5NIE2_FRATT
AccessioniPrimary (citable) accession number: Q5NIE2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: May 10, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.